Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 1.4e-120 436.4 231 100.0
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 1.2e-39 167.5 169 53.8
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 1.3e-38 164.1 165 51.5
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 3.8e-38 162.5 140 59.3
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 3.8e-38 162.5 140 59.3
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 6.4e-38 161.8 175 52.0
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 1.4e-37 160.6 162 51.2
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 3.2e-37 159.5 185 48.6
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 4.2e-37 159.1 172 50.6
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 5.4e-37 158.7 176 47.2
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 5.4e-37 158.7 167 49.7
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.2e-36 157.5 223 44.4
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 1.2e-36 157.5 195 47.7
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 3.5e-36 156.0 202 44.6
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 3.5e-36 156.0 169 49.1
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 4.6e-36 155.6 178 50.6
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 4.6e-36 155.6 195 47.2
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 4.6e-36 155.6 195 46.7
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 7.8e-36 154.8 156 51.3
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 7.8e-36 154.8 177 49.2
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 1.0e-35 154.5 198 45.5
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 1.0e-35 154.5 196 46.9
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.3e-35 154.1 155 51.6
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.3e-35 154.1 131 58.8
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.3e-35 154.1 137 55.5
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 1.7e-35 153.7 155 51.6
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 1.7e-35 153.7 155 51.6
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 2.3e-35 153.3 170 50.0
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 2.3e-35 153.3 171 46.2
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 2.3e-35 153.3 169 53.3
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 3.0e-35 152.9 191 46.1
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 3.0e-35 152.9 131 58.0
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 3.9e-35 152.5 144 53.5
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 3.9e-35 152.5 171 48.0
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 3.9e-35 152.5 165 50.9
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 3.9e-35 152.5 147 53.7
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 5.1e-35 152.1 176 48.9
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 5.1e-35 152.1 138 55.1
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 6.6e-35 151.8 173 49.7
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 6.6e-35 151.8 197 45.7
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 6.6e-35 151.8 139 54.7
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 6.6e-35 151.8 134 53.7
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 6.6e-35 151.8 136 54.4
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 8.7e-35 151.4 137 54.0
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 1.1e-34 151.0 195 45.1
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 1.1e-34 151.0 197 45.2
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.1e-34 151.0 131 58.0
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 1.1e-34 151.0 196 44.9
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.5e-34 150.6 187 47.6
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 1.5e-34 150.6 155 51.0
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 1.9e-34 150.2 135 57.0
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 2.5e-34 149.8 123 59.3
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 3.3e-34 149.4 174 47.1
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 4.3e-34 149.1 191 44.5
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 4.3e-34 149.1 137 54.7
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 4.3e-34 149.1 172 48.8
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 5.6e-34 148.7 185 45.9
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 7.3e-34 148.3 187 43.9
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 9.6e-34 147.9 200 43.0
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 1.3e-33 147.5 204 42.6
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 1.3e-33 147.5 164 48.8
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 1.3e-33 147.5 133 56.4
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 1.3e-33 147.5 137 54.7
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 2.8e-33 146.4 164 48.8
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 2.8e-33 146.4 152 51.3
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 3.6e-33 146.0 137 53.3
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 3.6e-33 146.0 168 49.4
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 4.8e-33 145.6 137 52.6
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 4.8e-33 145.6 139 54.0
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 6.2e-33 145.2 138 50.7
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 6.2e-33 145.2 162 48.1
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 1.1e-32 144.4 135 51.9
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.1e-32 144.4 194 43.8
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.4e-32 144.1 136 52.9
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 1.4e-32 144.1 136 53.7
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 1.4e-32 144.1 167 46.7
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.4e-32 144.1 180 46.7
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 1.8e-32 143.7 198 40.4
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 2.4e-32 143.3 168 50.6
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 4.0e-32 142.5 136 52.9
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 4.0e-32 142.5 136 53.7
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 5.3e-32 142.1 131 53.4
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 5.3e-32 142.1 139 49.6
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 9.0e-32 141.4 130 52.3
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 9.0e-32 141.4 138 53.6
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 9.0e-32 141.4 135 51.1
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 1.2e-31 141.0 142 52.1
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 1.2e-31 141.0 161 48.4
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 1.2e-31 141.0 139 50.4
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 1.5e-31 140.6 203 40.9
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 2.6e-31 139.8 155 47.7
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.6e-31 139.8 155 47.7
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.6e-31 139.8 155 47.7
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 4.5e-31 139.0 138 52.2
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 7.6e-31 138.3 158 44.9
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 1.7e-30 137.1 151 46.4
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.7e-30 137.1 167 46.1
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 4.9e-30 135.6 128 50.0
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 1.4e-29 134.0 157 45.9
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.4e-29 134.0 165 43.0
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 5.4e-29 132.1 210 39.5
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 1.6e-28 130.6 137 45.3
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.4e-24 117.5 101 54.5
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 3.4e-23 112.8 194 41.8
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 2.7e-20 103.2 89 56.2
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 3.5e-20 102.8 89 59.6
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 1.9e-18 97.1 131 44.3
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 1.1e-13 81.3 66 54.5
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 1.1e-10 71.2 77 49.4
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 3.4e-07 59.7 206 26.2
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 2.9e-06 56.6 113 31.9


User provided reference genes

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