Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_16000 Physcomitrium patens HOM05D011033 ORTHO05D015595 8.2e-174 613.6 308 100.0
Mapoly0147s0036 Marchantia polymorpha HOM05D011033 ORTHO05D015595 2.0e-95 353.2 290 64.5
CBR_g18701 Chara braunii HOM05D011033 ORTHO05D015595 3.9e-75 285.8 284 53.2
SEGI_12455 Sequoiadendron giganteum HOM05D011033 ORTHO05D015595 8.5e-70 268.1 312 48.7
PRCOL_00000473 Prasinoderma coloniale HOM05D011033 ORTHO05D015595 8.0e-28 128.6 210 37.6
Mapoly0056s0075 Marchantia polymorpha HOM05D011033 ORTHO05D018344 2.2e-17 94.0 136 34.6
SMO116G0165 Selaginella moellendorffii HOM05D011033 ORTHO05D018344 1.0e-14 85.1 139 31.7
AagrBONN_evm.TU.Sc2ySwM_362.1727 Anthoceros agrestis HOM05D011033 ORTHO05D018344 8.6e-14 82.0 194 28.4
Pp3c13_22200 Physcomitrium patens HOM05D011033 ORTHO05D018344 7.3e-13 79.0 111 35.1
CBR_g19207 Chara braunii HOM05D011033 ORTHO05D018344 3.1e-11 73.6 112 32.1
Cre16.g671950 Chlamydomonas reinhardtii HOM05D011033 ORTHO05D018344 8.9e-11 72.0 128 28.9
Prupe.6G279600 Prunus persica HOM05D001170 ORTHO05D008741 5.8e-10 69.3 104 38.5
SMO164G0162 Selaginella moellendorffii HOM05D011033 ORTHO05D018344 1.1e-08 65.1 213 26.8
FAN09G0318 Fragaria x ananassa HOM05D001170 ORTHO05D008741 7.1e-08 62.4 104 36.5
AL4G35350 Arabidopsis lyrata HOM05D001170 ORTHO05D008741 9.2e-08 62.0 104 34.6
BcaB01g03712 Brassica carinata HOM05D001170 ORTHO05D008741 9.2e-08 62.0 99 36.4
FvH4_6g11240 Fragaria vesca HOM05D001170 ORTHO05D008741 1.2e-07 61.6 104 36.5
FAN14G2338 Fragaria x ananassa HOM05D001170 ORTHO05D008741 1.2e-07 61.6 104 36.5
FAN14G4496 Fragaria x ananassa HOM05D001170 ORTHO05D008741 1.2e-07 61.6 104 36.5
COL.COLO4_14511 Corchorus olitorius HOM05D001343 ORTHO05D002008 1.6e-07 61.2 104 37.5
QL07p035137 Quercus lobata HOM05D001170 ORTHO05D008741 1.6e-07 61.2 80 40.0
FAN02G4623 Fragaria x ananassa HOM05D001170 ORTHO05D008741 2.7e-07 60.5 104 36.5
MBI15_g13301_MAGBIO Magnolia biondii HOM05D001170 ORTHO05D008741 2.7e-07 60.5 81 40.7
AagrBONN_evm.TU.Sc2ySwM_362.2023 Anthoceros agrestis HOM05D001170 ORTHO05D008741 3.5e-07 60.1 103 33.0
Duzib093G1404 Durio zibethinus HOM05D001170 ORTHO05D008741 3.5e-07 60.1 105 36.2
SEGI_27167 Sequoiadendron giganteum HOM05D001170 ORTHO05D008741 3.5e-07 60.1 133 33.1
A03p21110 Brassica napus HOM05D001170 ORTHO05D008741 6.0e-07 59.3 100 36.0
BraA03t11352Z Brassica rapa HOM05D001170 ORTHO05D008741 6.0e-07 59.3 100 36.0
Sp4g20550 Schrenkiella parvula HOM05D001170 ORTHO05D008741 6.0e-07 59.3 99 34.3
Hund10990 Selenicereus undatus HOM05D001170 ORTHO05D008741 6.0e-07 59.3 103 35.0
CARHR132850 Cardamine hirsuta HOM05D001170 ORTHO05D008741 7.8e-07 58.9 93 36.6
RcHm_v2.0_Chr3g0462751 Rosa chinensis HOM05D001170 ORTHO05D008741 7.8e-07 58.9 80 36.2
Cfa017188 Carpinus fangiana HOM05D001170 ORTHO05D008741 1.0e-06 58.5 78 41.0
Lsat_1_v5_gn_8_101640 Lactuca sativa HOM05D001170 ORTHO05D008741 1.0e-06 58.5 103 31.1
Aqoxy4G02521 Aquilegia oxysepala HOM05D001170 ORTHO05D008741 1.3e-06 58.2 111 31.5
BcaC01g05553 Brassica carinata HOM05D001170 ORTHO05D008741 1.3e-06 58.2 100 35.0
C03p25000 Brassica napus HOM05D001170 ORTHO05D008741 1.3e-06 58.2 100 35.0
BolC3t14891H Brassica oleracea HOM05D001170 ORTHO05D008741 1.3e-06 58.2 100 35.0
Carub.0004s2022 Capsella rubella HOM05D001170 ORTHO05D008741 1.3e-06 58.2 104 32.7
DCAR_018690 Daucus carota HOM05D001170 ORTHO05D008741 1.3e-06 58.2 80 38.8
ECA236G0793 Erigeron canadensis HOM05D001170 ORTHO05D008741 1.3e-06 58.2 103 34.0
Thhalv10017037m.g Eutrema salsugineum HOM05D001170 ORTHO05D008741 1.3e-06 58.2 98 34.7
Actinidia05360 Actinidia chinensis HOM05D001170 ORTHO05D008741 1.7e-06 57.8 103 35.0
Ciclev10012321m.g Citrus clementina HOM05D001170 ORTHO05D008741 1.7e-06 57.8 111 33.3
ATR0681G276 Amborella trichopoda HOM05D001170 ORTHO05D008741 2.3e-06 57.4 131 32.1
AT2G38270 Arabidopsis thaliana HOM05D001170 ORTHO05D008741 2.3e-06 57.4 104 36.5
CSS0009561 Camellia sinensis var. sinensis HOM05D001170 ORTHO05D008741 2.3e-06 57.4 80 37.5
Gohir.D09G161700 Gossypium hirsutum HOM05D001170 ORTHO05D008741 2.3e-06 57.4 104 35.6
Gorai.006G183400 Gossypium raimondii HOM05D001170 ORTHO05D008741 2.3e-06 57.4 104 35.6
THA.LOC104805920 Tarenaya hassleriana HOM05D001170 ORTHO05D008741 2.3e-06 57.4 86 37.2
CiPaw.09G210900 Carya illinoinensis HOM05D001170 ORTHO05D008741 3.0e-06 57.0 78 41.0
CBR_g22937 Chara braunii HOM05D001170 ORTHO05D008741 3.0e-06 57.0 103 35.0
Haze_20986 Corylus avellana HOM05D001170 ORTHO05D008741 3.0e-06 57.0 78 39.7
Lj2A72T46 Lonicera japonica HOM05D001170 ORTHO05D008741 3.9e-06 56.6 101 31.7
Atru.chr8.2265 Acer truncatum HOM05D001170 ORTHO05D008741 5.1e-06 56.2 80 37.5
CDE06G1991 Ceratophyllum demersum HOM05D001170 ORTHO05D008741 5.1e-06 56.2 77 40.3
Glyma.03G056300 Glycine max HOM05D001170 ORTHO05D008741 5.1e-06 56.2 104 32.7
MCO01G282 Micromonas commoda HOM05D001170 ORTHO05D008741 5.1e-06 56.2 83 37.3
Gohir.A09G166100 Gossypium hirsutum HOM05D001170 ORTHO05D008741 6.6e-06 55.8 78 39.7
PRCOL_00006614 Prasinoderma coloniale HOM05D011033 ORTHO05D018344 6.6e-06 55.8 114 27.2
vmacro08884 Vaccinium macrocarpon HOM05D001170 ORTHO05D008741 6.6e-06 55.8 80 35.0
Cpa.g.sc11.97 Carica papaya HOM05D001170 ORTHO05D008741 8.6e-06 55.5 78 38.5
Lj3g0006921 Lotus japonicus HOM05D001170 ORTHO05D008741 8.6e-06 55.5 104 35.6


User provided reference genes

Program Settings