Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c8_11260 Physcomitrium patens HOM05D026222 ORTHO05D015879 0.0e+00 2798.8 1441 100.0
Pp3c24_12930 Physcomitrium patens HOM05D026222 ORTHO05D015879 0.0e+00 1773.1 1460 67.9
Pp3c1_31050 Physcomitrium patens HOM05D019165 ORTHO05D015879 4.3e-55 221.5 1201 26.3
Pp3c2_7510 Physcomitrium patens HOM05D019165 ORTHO05D015879 8.9e-45 187.2 1197 25.6
AagrBONN_evm.TU.Sc2ySwM_344.4773 Anthoceros agrestis HOM05D026222 ORTHO05D015879 1.5e-36 159.8 920 26.6
Pp3c5_7380 Physcomitrium patens HOM05D042831 ORTHO05D001588 3.2e-18 99.0 1562 23.0
Mapoly0065s0025 Marchantia polymorpha HOM05D026222 ORTHO05D001588 1.2e-17 97.1 1359 23.9
Pp3c26_2080 Physcomitrium patens HOM05D019165 ORTHO05D015879 3.5e-17 95.5 98 41.8
Pp3c17_11090 Physcomitrium patens HOM05D018276 ORTHO05D001148 9.6e-15 87.4 204 30.4
Pp3c6_18850 Physcomitrium patens HOM05D042831 ORTHO05D001588 1.3e-11 77.0 1581 21.9
CSS0000385 Camellia sinensis var. sinensis HOM05D001693 ORTHO05D001588 1.7e-11 76.6 318 26.1
CBR_g48317 Chara braunii HOM05D019165 ORTHO05D015879 8.4e-11 74.3 149 34.2
Migut.K01268 Erythranthe guttata HOM05D001693 ORTHO05D001588 7.1e-10 71.2 196 28.1
ECA232G0439 Erigeron canadensis HOM05D001693 ORTHO05D001588 1.6e-09 70.1 204 26.0
Glyma.06G204400 Glycine max HOM05D001693 ORTHO05D001588 1.6e-09 70.1 312 25.3
Nn6g33418 Nelumbo nucifera HOM05D002082 ORTHO05D002130 1.6e-09 70.1 210 25.7
ClCG04G011700 Citrullus lanatus HOM05D001693 ORTHO05D001588 2.1e-09 69.7 404 23.8
Rhsim10G0052000 Rhododendron simsii HOM05D001693 ORTHO05D001588 3.5e-09 68.9 497 23.7
CSS0025996 Camellia sinensis var. sinensis HOM05D001693 ORTHO05D001588 6.0e-09 68.2 321 24.9
Pp3c2_13420 Physcomitrium patens HOM05D002110 ORTHO05D001148 6.0e-09 68.2 175 25.1
Hma1.2p1_0029F.1_g018050 Hydrangea macrophylla HOM05D001693 ORTHO05D001588 7.9e-09 67.8 310 26.1
SEGI_29651 Sequoiadendron giganteum HOM05D002769 ORTHO05D003160 7.9e-09 67.8 343 22.4
CBR_g72675 Chara braunii HOM05D019165 ORTHO05D015879 1.3e-08 67.0 197 28.4
Actinidia10009 Actinidia chinensis HOM05D002082 ORTHO05D002130 3.0e-08 65.9 200 28.0
Cc02_g38040 Coffea canephora HOM05D002082 ORTHO05D002130 3.0e-08 65.9 185 27.0
Mapoly0001s0174 Marchantia polymorpha HOM05D002515 ORTHO05D002722 3.0e-08 65.9 181 27.6
Pp3c21_17470 Physcomitrium patens HOM05D047283 ORTHO05D050336 3.0e-08 65.9 179 30.2
TAR629G0527 Trochodendron aralioides HOM05D002082 ORTHO05D002130 3.9e-08 65.5 282 24.1
MSTRG.4485 Avicennia marina HOM05D001693 ORTHO05D001588 5.1e-08 65.1 119 34.5
CSS0026202 Camellia sinensis var. sinensis HOM05D002110 ORTHO05D001148 5.1e-08 65.1 148 31.8
CSS0011639 Camellia sinensis var. sinensis HOM05D001693 ORTHO05D001588 8.7e-08 64.3 387 23.0
Migut.D01631 Erythranthe guttata HOM05D001693 ORTHO05D001588 8.7e-08 64.3 185 29.2
SEGI_17249 Sequoiadendron giganteum HOM05D001693 ORTHO05D001588 8.7e-08 64.3 1063 21.4
Sopen01g038450 Solanum pennellii HOM05D002082 ORTHO05D002130 8.7e-08 64.3 188 25.5
Manes.11G128400 Manihot esculenta HOM05D002515 ORTHO05D002722 1.5e-07 63.5 170 26.5
Actinidia33420 Actinidia chinensis HOM05D002082 ORTHO05D002130 1.9e-07 63.2 290 22.8
MBI17_g24689_MAGBIO Magnolia biondii HOM05D002082 ORTHO05D002130 2.5e-07 62.8 251 23.5
Oeu016480.1 Olea europaea HOM05D002110 ORTHO05D001148 2.5e-07 62.8 147 29.3
vmacro05642 Vaccinium macrocarpon HOM05D001693 ORTHO05D001588 2.5e-07 62.8 565 24.2
Actinidia12703 Actinidia chinensis HOM05D002082 ORTHO05D002130 3.3e-07 62.4 500 20.6
Ah.12g062700 Amaranthus hybridus HOM05D001693 ORTHO05D001588 3.3e-07 62.4 188 26.1
PGSC0003DMG400000172 Solanum tuberosum HOM05D002082 ORTHO05D002130 3.3e-07 62.4 188 25.0
Oeu052948.3 Olea europaea HOM05D002082 ORTHO05D002130 4.3e-07 62.0 192 27.6
EL10Ac2g03148 Beta vulgaris HOM05D001693 ORTHO05D001588 5.6e-07 61.6 210 24.8
CSS0003251 Camellia sinensis var. sinensis HOM05D002082 ORTHO05D002130 5.6e-07 61.6 188 26.1
Lj7A512T28 Lonicera japonica HOM05D002082 ORTHO05D002130 5.6e-07 61.6 248 23.0
Oeu053748.1 Olea europaea HOM05D002082 ORTHO05D002130 7.4e-07 61.2 186 25.3
SEGI_23141 Sequoiadendron giganteum HOM05D002769 ORTHO05D001913 7.4e-07 61.2 172 27.3
Oeu006438.1 Olea europaea HOM05D002110 ORTHO05D001148 1.3e-06 60.5 209 26.3
DCAR_005854 Daucus carota HOM05D003827 ORTHO05D004518 1.6e-06 60.1 144 28.5
Sed0007310 Sechium edule HOM05D001693 ORTHO05D001588 1.6e-06 60.1 407 21.6
TAR375G0315 Trochodendron aralioides HOM05D002082 ORTHO05D002130 1.6e-06 60.1 185 25.4
AUR62018198 Chenopodium quinoa HOM05D001693 ORTHO05D001588 2.1e-06 59.7 201 26.4
Pp3c20_14620 Physcomitrium patens HOM05D018276 ORTHO05D030469 2.1e-06 59.7 346 24.6
EL10Ac5g10483 Beta vulgaris HOM05D003827 ORTHO05D004518 2.8e-06 59.3 227 25.1
Actinidia04816 Actinidia chinensis HOM05D001693 ORTHO05D001588 3.7e-06 58.9 153 30.1
SalBow3G1736 Salvia bowleyana HOM05D002082 ORTHO05D002130 3.7e-06 58.9 110 30.9
Oeu044881.3 Olea europaea HOM05D001693 ORTHO05D001588 4.8e-06 58.5 231 23.8
vmacro17617 Vaccinium macrocarpon HOM05D001693 ORTHO05D001588 4.8e-06 58.5 220 25.0
DCAR_015992 Daucus carota HOM05D002082 ORTHO05D002130 6.2e-06 58.2 117 32.5
Nn1g01537 Nelumbo nucifera HOM05D002082 ORTHO05D002130 6.2e-06 58.2 275 23.3
TAR365G0698 Trochodendron aralioides HOM05D002110 ORTHO05D001148 6.2e-06 58.2 153 28.8
TAR636G0944 Trochodendron aralioides HOM05D002082 ORTHO05D002130 6.2e-06 58.2 329 23.4
unitig_26.g9306 Utricularia gibba HOM05D002082 ORTHO05D002130 6.2e-06 58.2 221 25.8
Pp3c18_4120 Physcomitrium patens HOM05D047283 ORTHO05D050336 8.1e-06 57.8 113 31.0


User provided reference genes

Program Settings