Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 4.7e-114 414.5 197 100.0
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 3.5e-61 238.8 196 54.6
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 1.5e-56 223.4 195 53.8
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 2.0e-56 223.0 198 52.0
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 1.3e-55 220.3 195 49.7
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 4.9e-55 218.4 193 51.3
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 1.1e-54 217.2 196 49.0
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 1.1e-54 217.2 197 49.2
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 3.5e-53 212.2 196 50.0
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 6.0e-53 211.5 196 46.9
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 6.0e-53 211.5 195 47.2
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 6.0e-53 211.5 196 46.9
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 6.0e-53 211.5 196 49.5
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 7.9e-53 211.1 196 48.0
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 1.0e-52 210.7 196 49.5
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 1.0e-52 210.7 196 49.5
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 1.3e-52 210.3 196 46.9
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 1.3e-52 210.3 196 47.4
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 3.0e-52 209.1 195 47.7
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 3.0e-52 209.1 194 49.5
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 3.0e-52 209.1 195 48.2
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 3.0e-52 209.1 196 46.9
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.9e-52 208.8 196 46.4
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 6.7e-52 208.0 196 46.9
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 8.7e-52 207.6 195 47.7
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 1.9e-51 206.5 198 48.0
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 5.6e-51 204.9 200 49.5
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 7.4e-51 204.5 193 48.7
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 9.6e-51 204.1 194 45.9
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.3e-50 203.8 196 46.9
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 1.6e-50 203.4 197 46.7
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 2.1e-50 203.0 195 47.7
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 2.8e-50 202.6 194 44.3
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 2.8e-50 202.6 194 46.9
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 3.7e-50 202.2 198 47.5
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 3.7e-50 202.2 196 46.9
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 3.7e-50 202.2 196 48.0
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 4.8e-50 201.8 194 44.8
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 4.8e-50 201.8 194 43.8
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 6.2e-50 201.4 197 45.2
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 6.2e-50 201.4 195 47.7
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 8.1e-50 201.1 197 45.2
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 1.1e-49 200.7 196 46.4
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 1.4e-49 200.3 196 43.9
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.4e-49 200.3 191 47.1
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.4e-49 200.3 191 47.1
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 1.8e-49 199.9 192 45.8
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.4e-49 199.5 214 43.0
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 5.3e-49 198.4 199 45.7
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 9.0e-49 197.6 197 43.7
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 9.0e-49 197.6 195 46.7
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 1.2e-48 197.2 197 44.2
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 1.2e-48 197.2 192 47.9
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 1.5e-48 196.8 194 44.8
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 2.0e-48 196.4 194 42.8
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 2.6e-48 196.1 194 45.9
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 2.6e-48 196.1 192 43.2
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 3.4e-48 195.7 196 41.3
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 4.5e-48 195.3 197 44.2
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 5.8e-48 194.9 196 41.3
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 5.8e-48 194.9 196 41.8
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 5.8e-48 194.9 196 41.8
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 7.6e-48 194.5 194 45.4
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 1.0e-47 194.1 195 45.6
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 1.7e-47 193.4 192 45.3
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 1.7e-47 193.4 200 45.0
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 2.9e-47 192.6 192 42.7
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 2.9e-47 192.6 195 43.1
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 3.8e-47 192.2 196 45.9
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 6.5e-47 191.4 197 43.1
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 8.4e-47 191.0 179 47.5
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 8.4e-47 191.0 179 47.5
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.4e-46 190.3 163 51.5
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 1.4e-46 190.3 197 42.6
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 2.5e-46 189.5 178 47.8
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 2.5e-46 189.5 194 43.8
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 3.2e-46 189.1 196 42.9
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 5.5e-46 188.3 197 44.2
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 5.5e-46 188.3 196 42.3
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 2.1e-45 186.4 194 42.8
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 2.7e-45 186.0 197 43.1
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 3.5e-45 185.7 196 41.8
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 3.5e-45 185.7 190 42.1
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 1.8e-44 183.3 162 50.6
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 3.9e-44 182.2 196 40.8
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 8.7e-44 181.0 164 50.6
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.9e-43 179.9 169 46.7
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 9.0e-41 171.0 169 43.8
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 2.2e-39 166.4 197 41.6
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 2.9e-39 166.0 198 39.4
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 1.4e-38 163.7 165 43.6
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 1.9e-38 163.3 156 46.2
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 2.5e-38 162.9 162 46.3
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 1.2e-37 160.6 167 43.7
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 1.3e-36 157.1 218 39.4
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 3.3e-35 152.5 218 33.0
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 2.2e-34 149.8 197 38.1
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.1e-33 147.5 166 41.6
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 1.8e-33 146.7 197 40.6
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 3.4e-32 142.5 194 36.6
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 1.0e-28 131.0 95 57.9
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 4.3e-27 125.6 133 42.1
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 4.3e-27 125.6 133 42.1
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 1.5e-24 117.1 132 37.9
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 1.0e-23 114.4 196 32.1
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 6.5e-23 111.7 78 62.8
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 1.1e-22 110.9 71 67.6
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 2.5e-22 109.8 179 34.6
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 1.0e-20 104.4 173 32.4
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 1.1e-17 94.4 154 31.8
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 4.5e-16 89.0 91 44.0
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 1.6e-13 80.5 111 36.0
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 2.1e-13 80.1 89 38.2
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 1.3e-10 70.9 142 27.5
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 2.8e-10 69.7 229 27.5
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 2.6e-08 63.2 68 42.6
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 5.5e-06 55.5 51 52.9
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 5.5e-06 55.5 56 42.9


User provided reference genes

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