Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_7450 Physcomitrium patens HOM05D004699 ORTHO05D005668 9.3e-184 646.7 327 100.0
Pp3c11_21230 Physcomitrium patens HOM05D004699 ORTHO05D005668 1.1e-147 526.9 327 81.0
Mapoly0019s0063 Marchantia polymorpha HOM05D004699 ORTHO05D005668 3.0e-105 386.0 317 62.1
Cpa.g.sc53.21 Carica papaya HOM05D004699 ORTHO05D005668 1.9e-88 330.1 310 53.9
ATR0661G308 Amborella trichopoda HOM05D004699 ORTHO05D005668 1.3e-87 327.4 312 52.9
CANSAT56G2462 Cannabis sativa HOM05D004699 ORTHO05D005668 1.8e-86 323.6 314 51.3
TAR633G1364 Trochodendron aralioides HOM05D004699 ORTHO05D005668 2.4e-86 323.2 310 52.6
Sc09g0006780 Simmondsia chinensis HOM05D004699 ORTHO05D005668 3.1e-86 322.8 314 52.5
Thecc.10G067900 Theobroma cacao HOM05D004699 ORTHO05D005668 1.5e-85 320.5 310 51.0
Cc03_g16280 Coffea canephora HOM05D004699 ORTHO05D005668 3.4e-85 319.3 311 52.4
Potri.008G044100 Populus trichocarpa HOM05D004699 ORTHO05D005668 5.8e-85 318.5 308 51.0
ClCG06G002910 Citrullus lanatus HOM05D004699 ORTHO05D005668 1.3e-84 317.4 300 53.0
PGR142G2805 Punica granatum HOM05D004699 ORTHO05D005668 1.3e-84 317.4 314 50.3
Nn2g10994 Nelumbo nucifera HOM05D004699 ORTHO05D005668 1.7e-84 317.0 312 51.0
CSS0042102 Camellia sinensis var. sinensis HOM05D004699 ORTHO05D005668 2.2e-84 316.6 315 52.1
CSS0050516 Camellia sinensis var. sinensis HOM05D004699 ORTHO05D005668 4.9e-84 315.5 315 52.1
CiPaw.15G145000 Carya illinoinensis HOM05D004699 ORTHO05D005668 4.9e-84 315.5 310 49.4
Duzib114G0670 Durio zibethinus HOM05D004699 ORTHO05D005668 4.9e-84 315.5 310 49.7
CsaV3_6G009040 Cucumis sativus L. HOM05D004699 ORTHO05D005668 1.1e-83 314.3 301 51.8
Dinv11807 Davidia involucrata HOM05D004699 ORTHO05D005668 1.1e-83 314.3 315 50.8
QL08p056836 Quercus lobata HOM05D004699 ORTHO05D005668 1.1e-83 314.3 310 50.6
Gohir.D13G022200 Gossypium hirsutum HOM05D004699 ORTHO05D005668 1.9e-83 313.5 310 50.0
Gohir.A13G021600 Gossypium hirsutum HOM05D004699 ORTHO05D005668 2.4e-83 313.2 310 50.0
Gorai.013G025000 Gossypium raimondii HOM05D004699 ORTHO05D005668 5.4e-83 312.0 310 49.7
AUR62043639 Chenopodium quinoa HOM05D004699 ORTHO05D005668 7.1e-83 311.6 310 51.0
MELO3C022239.2 Cucumis melo HOM05D004699 ORTHO05D005668 1.6e-82 310.5 301 51.8
Actinidia38250 Actinidia chinensis HOM05D004699 ORTHO05D005668 3.5e-82 309.3 310 50.6
Lalb_Chr01g0010171 Lupinus albus HOM05D004699 ORTHO05D005668 4.6e-82 308.9 314 49.4
Actinidia03029 Actinidia chinensis HOM05D004699 ORTHO05D005668 6.0e-82 308.5 314 49.7
Potri.010G217400 Populus trichocarpa HOM05D004699 ORTHO05D005668 7.8e-82 308.1 310 49.7
Ah.10g033030 Amaranthus hybridus HOM05D004699 ORTHO05D005668 1.3e-81 307.4 311 51.4
MSTRG.6667 Avicennia marina HOM05D004699 ORTHO05D005668 1.3e-81 307.4 314 48.1
Sopen08g006240 Solanum pennellii HOM05D004699 ORTHO05D005668 2.3e-81 306.6 310 47.7
PGSC0003DMG400007657 Solanum tuberosum HOM05D004699 ORTHO05D005668 2.3e-81 306.6 310 48.1
Prupe.2G218300 Prunus persica HOM05D004699 ORTHO05D005668 3.0e-81 306.2 313 51.4
Haze_18894 Corylus avellana HOM05D004699 ORTHO05D005668 5.1e-81 305.4 320 49.1
HanXRQChr07g0195941 Helianthus annuus HOM05D004699 ORTHO05D005668 5.1e-81 305.4 311 49.2
Solyc08g015990.4 Solanum lycopersicum HOM05D004699 ORTHO05D005668 6.6e-81 305.1 310 47.4
Aqoxy2G00791 Aquilegia oxysepala HOM05D004699 ORTHO05D005668 8.7e-81 304.7 312 48.7
AUR62020788 Chenopodium quinoa HOM05D004699 ORTHO05D005668 1.1e-80 304.3 313 50.2
MD07G1179200 Malus domestica HOM05D004699 ORTHO05D005668 1.1e-80 304.3 313 50.8
Migut.M00004 Erythranthe guttata HOM05D004699 ORTHO05D005668 1.5e-80 303.9 314 49.4
Eucgr.G02801 Eucalyptus grandis HOM05D004699 ORTHO05D005668 1.5e-80 303.9 306 51.6
CAN.G8.39 Capsicum annuum HOM05D004699 ORTHO05D005668 1.9e-80 303.5 317 48.9
CDE04G1653 Ceratophyllum demersum HOM05D004699 ORTHO05D005668 1.9e-80 303.5 307 50.5
Nitab4.5_0005353g0020 Nicotiana tabacum HOM05D004699 ORTHO05D005668 1.9e-80 303.5 310 50.3
Solyc12g017820.2 Solanum lycopersicum HOM05D004699 ORTHO05D005668 1.9e-80 303.5 315 48.9
SalBow8G2974 Salvia bowleyana HOM05D004699 ORTHO05D005668 2.5e-80 303.1 311 49.8
CAN.G50.13 Capsicum annuum HOM05D004699 ORTHO05D005668 4.3e-80 302.4 310 48.4
Nitab4.5_0000348g0090 Nicotiana tabacum HOM05D004699 ORTHO05D005668 5.6e-80 302.0 310 47.4
Sed0011372 Sechium edule HOM05D004699 ORTHO05D005668 5.6e-80 302.0 305 49.5
Glyma.20G177500 Glycine max HOM05D004699 ORTHO05D005668 7.3e-80 301.6 314 48.4
Nitab4.5_0000219g0050 Nicotiana tabacum HOM05D004699 ORTHO05D005668 9.6e-80 301.2 309 50.5
PGSC0003DMG400002241 Solanum tuberosum HOM05D004699 ORTHO05D005668 9.6e-80 301.2 315 48.6
TWI63G1195 Tripterygium wilfordii HOM05D004699 ORTHO05D005668 9.6e-80 301.2 310 48.7
Nitab4.5_0001070g0040 Nicotiana tabacum HOM05D004699 ORTHO05D005668 1.3e-79 300.8 310 48.4
Medtr1g095910 Medicago truncatula HOM05D004699 ORTHO05D005668 2.1e-79 300.1 314 48.7
Psat6g186040 Pisum sativum HOM05D004699 ORTHO05D005668 2.1e-79 300.1 314 48.7
MD01G1131100 Malus domestica HOM05D004699 ORTHO05D005668 3.6e-79 299.3 313 50.8
THA.LOC104799349 Tarenaya hassleriana HOM05D004699 ORTHO05D005668 3.6e-79 299.3 311 50.5
Ca_10595_v3 Cicer arietinum L. HOM05D004699 ORTHO05D005668 4.8e-79 298.9 310 49.4
Lj5g0001210 Lotus japonicus HOM05D004699 ORTHO05D005668 6.2e-79 298.5 314 47.8
PSO765G0019 Papaver somniferum HOM05D004699 ORTHO05D005668 6.2e-79 298.5 310 49.4
ECA247G2135 Erigeron canadensis HOM05D004699 ORTHO05D005668 8.1e-79 298.1 311 48.2
Sopen12g008620 Solanum pennellii HOM05D004699 ORTHO05D005668 1.1e-78 297.7 322 47.8
Manes.07G102100 Manihot esculenta HOM05D004699 ORTHO05D005668 1.4e-78 297.4 311 46.6
RcHm_v2.0_Chr1g0364111 Rosa chinensis HOM05D004699 ORTHO05D005668 1.4e-78 297.4 316 48.7
Sabra10G0168100 Salix brachista HOM05D004699 ORTHO05D005668 2.4e-78 296.6 310 48.1
HanXRQChr14g0453411 Helianthus annuus HOM05D004699 ORTHO05D005668 4.0e-78 295.8 312 48.4
PSO349G0185 Papaver somniferum HOM05D004699 ORTHO05D005668 6.9e-78 295.0 310 48.7
arahy.Tifrunner.gnm1.ann1.3U687E Arachis hypogaea HOM05D004699 ORTHO05D005668 9.0e-78 294.7 310 48.4
Ciclev10032131m.g Citrus clementina HOM05D004699 ORTHO05D005668 2.0e-77 293.5 310 47.4
Glyma.10G214100 Glycine max HOM05D004699 ORTHO05D005668 2.0e-77 293.5 314 47.8
FvH4_7g20140 Fragaria vesca HOM05D004699 ORTHO05D005668 2.6e-77 293.1 316 48.1
FAN06G0847 Fragaria x ananassa HOM05D004699 ORTHO05D005668 2.6e-77 293.1 316 48.1
FAN10G1203 Fragaria x ananassa HOM05D004699 ORTHO05D005668 2.6e-77 293.1 316 48.1
AL8G40300 Arabidopsis lyrata HOM05D004699 ORTHO05D005668 4.5e-77 292.4 310 48.4
AT5G63220 Arabidopsis thaliana HOM05D004699 ORTHO05D005668 7.6e-77 291.6 310 48.4
arahy.Tifrunner.gnm1.ann1.TH86UG Arachis hypogaea HOM05D004699 ORTHO05D005668 9.9e-77 291.2 310 47.7
arahy.Tifrunner.gnm1.ann1.32M4WS Arachis hypogaea HOM05D004699 ORTHO05D005668 2.2e-76 290.0 310 47.7
Phvul.007G091600 Phaseolus vulgaris HOM05D004699 ORTHO05D005668 2.9e-76 289.7 314 47.1
DCAR_006464 Daucus carota HOM05D004699 ORTHO05D005668 4.9e-76 288.9 314 47.8
Carub.0008s2397 Capsella rubella HOM05D004699 ORTHO05D005668 6.4e-76 288.5 310 48.1
VMungo0720G0718 Vigna mungo HOM05D004699 ORTHO05D005668 8.4e-76 288.1 309 46.6
Aa31LG1G18760 Aethionema arabicum HOM05D004699 ORTHO05D005668 1.1e-75 287.7 310 48.1
CARHR277070 Cardamine hirsuta HOM05D004699 ORTHO05D005668 3.2e-75 286.2 310 46.8
Gorai.012G093600 Gossypium raimondii HOM05D004699 ORTHO05D005668 7.1e-75 285.0 310 46.5
Peaxi162Scf00057g00154 Petunia axillaris HOM05D004699 ORTHO05D005668 1.2e-74 284.3 310 49.4
BcaC01g02566 Brassica carinata HOM05D004699 ORTHO05D005668 2.1e-74 283.5 310 46.5
Thhalv10004594m.g Eutrema salsugineum HOM05D004699 ORTHO05D005668 2.1e-74 283.5 310 46.5
Sabra08G0030500 Salix brachista HOM05D004699 ORTHO05D005668 3.5e-74 282.7 355 43.4
Atru.chr12.635 Acer truncatum HOM05D004699 ORTHO05D005668 4.6e-74 282.3 310 45.5
BolC3t18594H Brassica oleracea HOM05D004699 ORTHO05D005668 6.0e-74 282.0 310 46.1
CDE07G1914 Ceratophyllum demersum HOM05D004699 ORTHO05D005668 6.0e-74 282.0 289 50.2
Gohir.A05G344400 Gossypium hirsutum HOM05D004699 ORTHO05D005668 1.3e-73 280.8 310 45.8
THA.LOC104827325 Tarenaya hassleriana HOM05D004699 ORTHO05D005668 3.0e-73 279.6 310 46.5
A06p29940 Brassica napus HOM05D004699 ORTHO05D005668 3.9e-73 279.3 310 46.1
HPP92_021827 Vanilla planifolia HOM05D004699 ORTHO05D005668 8.7e-73 278.1 312 47.1
Sp2g26340 Schrenkiella parvula HOM05D004699 ORTHO05D005668 2.5e-72 276.6 310 46.8
Oeu061895.3 Olea europaea HOM05D004699 ORTHO05D005668 3.3e-72 276.2 323 45.5
SMO116G0436 Selaginella moellendorffii HOM05D004699 ORTHO05D005668 7.4e-72 275.0 311 45.7
C09p09240 Brassica napus HOM05D004699 ORTHO05D005668 2.1e-71 273.5 310 45.5
BolC9t53837H Brassica oleracea HOM05D004699 ORTHO05D005668 2.1e-71 273.5 310 45.5
Peaxi162Scf01205g00165 Petunia axillaris HOM05D004699 ORTHO05D005668 2.1e-71 273.5 313 46.0
BraA09t36470Z Brassica rapa HOM05D004699 ORTHO05D005668 2.8e-71 273.1 310 45.5
Lalb_Chr21g0305871 Lupinus albus HOM05D004699 ORTHO05D005668 6.2e-71 271.9 310 45.8
A09p08190 Brassica napus HOM05D004699 ORTHO05D005668 1.8e-70 270.4 311 46.0
TAR636G2780 Trochodendron aralioides HOM05D004699 ORTHO05D005668 4.0e-70 269.2 273 50.5
Lsat_1_v5_gn_2_110160 Lactuca sativa HOM05D004699 ORTHO05D005668 2.9e-68 263.1 285 48.8
Duzib106G1564 Durio zibethinus HOM05D004699 ORTHO05D005668 8.4e-68 261.5 310 43.5
CBR_g49532 Chara braunii HOM05D004699 ORTHO05D005668 1.2e-66 257.7 305 43.3
Dinv31344 Davidia involucrata HOM05D004699 ORTHO05D005668 2.7e-66 256.5 258 50.4
Hund19333 Selenicereus undatus HOM05D004699 ORTHO05D005668 2.7e-66 256.5 360 41.7
BraA06t25945Z Brassica rapa HOM05D004699 ORTHO05D005668 4.6e-66 255.8 283 45.9
C03p63420 Brassica napus HOM05D004699 ORTHO05D005668 7.9e-66 255.0 303 44.2
Cfa019630 Carpinus fangiana HOM05D004699 ORTHO05D005668 1.6e-63 247.3 254 50.0
FAN03G0794 Fragaria x ananassa HOM05D004699 ORTHO05D005668 6.9e-62 241.9 313 42.8
Zm00001eb123410 Zea mays HOM05D004699 ORTHO05D005668 2.9e-60 236.5 266 47.7
vmacro07089 Vaccinium macrocarpon HOM05D004699 ORTHO05D005668 3.8e-60 236.1 406 37.2
FAN01G1284 Fragaria x ananassa HOM05D004699 ORTHO05D005668 7.1e-59 231.9 314 41.7
CSS0008535 Camellia sinensis var. sinensis HOM05D004699 ORTHO05D005668 2.7e-58 229.9 201 56.7
arahy.Tifrunner.gnm1.ann1.I3EVQT Arachis hypogaea HOM05D004699 ORTHO05D005668 2.3e-57 226.9 267 44.2
Gohir.D04G082900 Gossypium hirsutum HOM05D004699 ORTHO05D005668 3.3e-56 223.0 310 39.7
arahy.Tifrunner.gnm1.ann1.UD3ZER Arachis hypogaea HOM05D004699 ORTHO05D005668 2.2e-55 220.3 290 41.4
CDE07G0668 Ceratophyllum demersum HOM05D004699 ORTHO05D005668 2.2e-55 220.3 312 40.7
Lj8C95T3 Lonicera japonica HOM05D004699 ORTHO05D005668 1.4e-54 217.6 233 45.9
Hund22480 Selenicereus undatus HOM05D004699 ORTHO05D005668 3.1e-54 216.5 259 44.8
SGA_v2.0_scaffold277G46671 Striga asiatica HOM05D004699 ORTHO05D000105 4.1e-54 216.1 530 29.6
AagrBONN_evm.TU.Sc2ySwM_344.3470 Anthoceros agrestis HOM05D004699 ORTHO05D005668 3.3e-48 196.4 191 49.7
Zm00001eb336250 Zea mays HOM05D004699 ORTHO05D005668 9.7e-48 194.9 226 46.0
TPR.G1830 Trifolium pratense HOM05D004699 ORTHO05D005668 4.8e-47 192.6 208 46.2
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 1.1e-43 181.4 145 57.9
Rhsim03G0122800 Rhododendron simsii HOM05D004699 ORTHO05D005668 1.2e-34 151.4 165 47.3
Cre06.g282950 Chlamydomonas reinhardtii HOM05D004699 ORTHO05D005668 1.5e-27 127.9 336 29.2
Hma1.2p1_0904F.1_g235250 Hydrangea macrophylla HOM05D004699 ORTHO05D005668 2.1e-18 97.4 86 52.3
Hma1.2p1_0904F.1_g235240 Hydrangea macrophylla HOM05D004699 ORTHO05D005668 8.0e-18 95.5 75 54.7
Oeu050294.2 Olea europaea HOM05D004699 ORTHO05D005668 3.4e-16 90.1 117 43.6
Gohir.D05G316201 Gossypium hirsutum HOM05D004699 ORTHO05D005668 4.4e-16 89.7 98 49.0
Gorai.009G338200 Gossypium raimondii HOM05D004699 ORTHO05D005668 9.8e-16 88.6 98 49.0
RcHm_v2.0_Chr5g0038701 Rosa chinensis HOM05D004699 ORTHO05D005668 4.9e-15 86.3 84 48.8
Dinv04679 Davidia involucrata HOM05D004699 ORTHO05D005668 9.1e-14 82.0 81 48.1
RcHm_v2.0_Chr2g0153331 Rosa chinensis HOM05D004699 ORTHO05D005668 9.1e-14 82.0 77 50.6
SEGI_20090 Sequoiadendron giganteum HOM05D004699 ORTHO05D005668 4.7e-10 69.7 84 44.0
Os01g0164700 Oryza sativa ssp. japonica HOM05D004699 ORTHO05D005668 1.7e-07 61.2 53 56.6
SEGI_31020 Sequoiadendron giganteum HOM05D004699 ORTHO05D005668 1.4e-06 58.2 52 55.8


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