Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 3.4e-49 198.0 97 100.0
Mapoly0137s0028 Marchantia polymorpha HOM05D006634 ORTHO05D008282 6.9e-18 94.0 91 48.4
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 9.7e-12 73.6 92 42.4
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 9.7e-12 73.6 92 42.4
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 1.6e-11 72.8 92 41.3
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 3.7e-11 71.6 92 42.4
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 4.8e-11 71.2 90 36.7
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 6.3e-11 70.9 91 40.7
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 1.1e-10 70.1 92 43.5
CBR_g51663 Chara braunii HOM05D006634 ORTHO05D008282 1.8e-10 69.3 92 32.6
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 3.1e-10 68.6 92 40.2
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 4.1e-10 68.2 92 41.3
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 4.1e-10 68.2 91 38.5
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 5.3e-10 67.8 91 38.5
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 5.3e-10 67.8 92 42.4
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 6.9e-10 67.4 91 39.6
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 9.0e-10 67.0 91 38.5
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 9.0e-10 67.0 91 41.8
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 1.2e-09 66.6 92 38.0
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 1.2e-09 66.6 91 37.4
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 1.2e-09 66.6 91 38.5
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 1.2e-09 66.6 91 38.5
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-09 66.2 91 38.5
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-09 66.2 91 38.5
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-09 66.2 91 38.5
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-09 66.2 91 38.5
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 1.5e-09 66.2 91 38.5
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 1.5e-09 66.2 91 37.4
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 2.0e-09 65.9 92 40.2
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 2.0e-09 65.9 91 39.6
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 2.0e-09 65.9 91 38.5
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 2.6e-09 65.5 92 39.1
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 2.6e-09 65.5 91 39.6
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 2.6e-09 65.5 92 40.2
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 4.5e-09 64.7 91 40.7
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 4.5e-09 64.7 91 40.7
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 4.5e-09 64.7 92 38.0
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 4.5e-09 64.7 92 40.2
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 4.5e-09 64.7 91 37.4
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 5.9e-09 64.3 92 40.2
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 7.6e-09 63.9 92 40.2
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 1.0e-08 63.5 91 38.5
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 1.0e-08 63.5 91 38.5
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 1.0e-08 63.5 91 36.3
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 1.3e-08 63.2 91 35.2
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.3e-08 63.2 91 37.4
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.3e-08 63.2 99 37.4
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 1.3e-08 63.2 89 39.3
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 1.3e-08 63.2 91 38.5
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 1.7e-08 62.8 91 40.7
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 2.9e-08 62.0 91 38.5
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 2.9e-08 62.0 92 42.4
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 2.9e-08 62.0 91 38.5
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 5.0e-08 61.2 85 37.6
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 5.0e-08 61.2 91 35.2
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 6.5e-08 60.8 91 36.3
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 6.5e-08 60.8 35 68.6
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 8.5e-08 60.5 90 41.1
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 8.5e-08 60.5 91 37.4
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 1.9e-07 59.3 89 37.1
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 1.9e-07 59.3 91 38.5
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 3.2e-07 58.5 91 37.4
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 7.2e-07 57.4 91 36.3
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 7.2e-07 57.4 92 39.1
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 7.2e-07 57.4 87 36.8
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 9.3e-07 57.0 93 35.5
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 1.6e-06 56.2 91 35.2
Ah.01g002900 Amaranthus hybridus HOM05D006634 ORTHO05D008282 2.7e-06 55.5 36 61.1
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 3.6e-06 55.1 91 34.1
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 3.6e-06 55.1 89 34.8
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 7.9e-06 53.9 91 36.3
AagrBONN_evm.TU.Sc2ySwM_362.2948 Anthoceros agrestis HOM05D006634 ORTHO05D008282 7.9e-06 53.9 76 42.1


User provided reference genes

Program Settings