Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 2.4e-145 518.8 270 100.0
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 9.0e-116 420.6 273 82.4
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 1.8e-79 300.1 238 67.2
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 1.6e-43 180.6 140 63.6
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 9.5e-25 118.2 184 37.0
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 6.2e-24 115.5 183 37.2
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 1.8e-23 114.0 183 37.7
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 3.1e-23 113.2 183 37.7
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 5.2e-23 112.5 172 40.1
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 5.2e-23 112.5 172 39.5
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 5.2e-23 112.5 183 36.6
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 6.8e-23 112.1 182 36.3
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 6.8e-23 112.1 182 35.7
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 8.9e-23 111.7 172 39.5
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 8.9e-23 111.7 184 39.1
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 1.5e-22 110.9 183 37.2
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 2.0e-22 110.5 185 35.7
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 2.0e-22 110.5 185 37.8
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 2.6e-22 110.2 200 35.0
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 3.4e-22 109.8 183 35.0
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 5.8e-22 109.0 189 38.6
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 5.8e-22 109.0 183 36.1
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 5.8e-22 109.0 203 35.5
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 7.5e-22 108.6 183 36.6
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 7.5e-22 108.6 186 36.6
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 7.5e-22 108.6 182 36.3
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 9.8e-22 108.2 183 36.1
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 9.8e-22 108.2 187 34.8
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 9.8e-22 108.2 187 37.4
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 9.8e-22 108.2 182 35.2
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 1.3e-21 107.8 175 37.1
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 1.3e-21 107.8 185 36.8
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 1.7e-21 107.5 185 36.2
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 2.2e-21 107.1 181 36.5
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 2.9e-21 106.7 183 34.4
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 2.9e-21 106.7 177 36.2
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 2.9e-21 106.7 175 36.0
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 3.7e-21 106.3 184 34.2
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 3.7e-21 106.3 183 35.5
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 4.9e-21 105.9 185 34.6
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 4.9e-21 105.9 185 33.5
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 4.9e-21 105.9 183 36.1
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 4.9e-21 105.9 181 35.4
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 4.9e-21 105.9 197 36.0
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 4.9e-21 105.9 183 36.1
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 6.4e-21 105.5 184 34.8
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 6.4e-21 105.5 181 36.5
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 6.4e-21 105.5 185 36.2
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 8.3e-21 105.1 184 34.2
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 8.3e-21 105.1 205 33.7
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 1.1e-20 104.8 183 35.5
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 2.4e-20 103.6 183 35.0
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 2.4e-20 103.6 182 35.7
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 2.4e-20 103.6 189 34.4
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 3.2e-20 103.2 180 33.9
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 3.2e-20 103.2 171 36.3
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 4.1e-20 102.8 184 36.4
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 4.1e-20 102.8 183 35.0
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 7.1e-20 102.1 183 33.9
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 7.1e-20 102.1 170 34.7
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 9.2e-20 101.7 183 35.0
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 1.6e-19 100.9 185 34.1
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 1.6e-19 100.9 170 35.3
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 2.1e-19 100.5 189 32.8
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 2.7e-19 100.1 177 35.0
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 4.6e-19 99.4 185 32.4
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 6.0e-19 99.0 180 33.3
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 7.8e-19 98.6 184 33.2
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 1.0e-18 98.2 183 33.3
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 1.3e-18 97.8 158 36.1
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 1.3e-18 97.8 158 36.1
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 3.0e-18 96.7 195 39.5
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 5.1e-18 95.9 194 30.4
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 5.1e-18 95.9 170 33.5
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 6.6e-18 95.5 179 33.0
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 6.6e-18 95.5 183 32.8
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 8.6e-18 95.1 149 36.2
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 4.3e-17 92.8 178 32.0
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 5.6e-17 92.4 162 34.6
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 2.1e-16 90.5 147 36.1
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 8.1e-16 88.6 149 37.6
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 8.1e-16 88.6 156 32.7
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 1.4e-15 87.8 153 35.3
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 2.3e-15 87.0 147 36.7
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 4.4e-14 82.8 141 35.5
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 4.4e-14 82.8 135 37.8
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 1.6e-11 74.3 110 35.5
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 1.6e-11 74.3 144 35.4
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 6.0e-11 72.4 102 38.2
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 7.8e-11 72.0 141 34.8
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 3.0e-10 70.1 201 29.9
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 3.3e-09 66.6 97 36.1
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 5.6e-09 65.9 112 33.9
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 4.7e-08 62.8 82 39.0
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.4e-07 61.2 105 35.2
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 1.4e-07 61.2 123 33.3


User provided reference genes

Program Settings