Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_5470 Physcomitrium patens HOM05D005864 ORTHO05D006770 4.8e-180 634.4 325 100.0
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 1.3e-76 290.8 268 62.3
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 1.8e-22 110.9 274 36.9
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 8.8e-17 92.0 265 34.0
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 5.7e-16 89.4 265 33.2
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 9.7e-16 88.6 263 31.2
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 8.2e-15 85.5 264 31.4
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 1.8e-14 84.3 253 32.4
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 3.1e-14 83.6 268 30.2
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 7.0e-14 82.4 268 33.2
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 9.1e-14 82.0 262 31.7
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 9.1e-14 82.0 264 30.7
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 1.2e-13 81.6 265 32.5
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 1.2e-13 81.6 264 31.1
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.2e-13 81.6 265 31.3
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 1.6e-13 81.3 262 30.9
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 2.6e-13 80.5 265 32.5
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 3.5e-13 80.1 263 29.3
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 1.3e-12 78.2 263 29.3
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 1.7e-12 77.8 263 29.7
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 1.7e-12 77.8 271 30.3
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.7e-12 77.8 264 31.4
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 3.8e-12 76.6 263 29.7
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 8.5e-12 75.5 262 30.2
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 8.5e-12 75.5 263 29.3
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 1.1e-11 75.1 260 29.2
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 1.1e-11 75.1 265 30.6
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 1.5e-11 74.7 283 30.4
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 1.9e-11 74.3 264 29.9
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 2.5e-11 73.9 261 29.1
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 2.5e-11 73.9 263 29.3
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 3.2e-11 73.6 264 31.1
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 5.5e-11 72.8 262 29.8
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 7.2e-11 72.4 263 30.0
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 7.2e-11 72.4 266 30.5
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 2.1e-10 70.9 263 28.1
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 2.1e-10 70.9 263 29.7
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 2.7e-10 70.5 261 30.3
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 3.6e-10 70.1 264 31.1
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 4.7e-10 69.7 243 32.1
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 8.0e-10 68.9 264 27.7
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 8.0e-10 68.9 265 30.2
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 1.0e-09 68.6 264 28.4
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 1.4e-09 68.2 263 28.9
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 3.0e-09 67.0 265 27.9
AagrBONN_evm.TU.Sc2ySwM_369.130 Anthoceros agrestis HOM05D005864 ORTHO05D006770 4.0e-09 66.6 227 33.0
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 4.0e-09 66.6 261 28.0
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 5.2e-09 66.2 263 27.4
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 6.7e-09 65.9 247 32.0
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 6.7e-09 65.9 265 28.7
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 8.8e-09 65.5 263 29.7
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 8.8e-09 65.5 265 29.8
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 8.8e-09 65.5 268 28.0
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 1.2e-08 65.1 262 27.5
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 1.2e-08 65.1 264 30.7
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 2.0e-08 64.3 259 27.8
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 2.6e-08 63.9 252 29.4
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 3.3e-08 63.5 312 25.3
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-08 63.2 261 26.1
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 4.4e-08 63.2 262 26.3
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 5.7e-08 62.8 248 29.4
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 7.5e-08 62.4 268 28.7
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 9.7e-08 62.0 263 27.4
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 1.7e-07 61.2 273 30.8
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 1.7e-07 61.2 265 30.2
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 2.8e-07 60.5 264 27.7
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 4.8e-07 59.7 38 73.7
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 4.8e-07 59.7 247 29.6
SMO356G0193 Selaginella moellendorffii HOM05D005864 ORTHO05D006770 4.8e-07 59.7 38 68.4
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.4e-06 58.2 38 68.4
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 2.4e-06 57.4 280 27.5
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 7.0e-06 55.8 259 25.9
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 9.1e-06 55.5 269 27.9
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 9.1e-06 55.5 274 25.9


User provided reference genes

Program Settings