Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_4920 Physcomitrium patens HOM05D005364 ORTHO05D006554 6.4e-114 414.1 207 100.0
Pp3c7_16700 Physcomitrium patens HOM05D005364 ORTHO05D006554 4.3e-102 374.8 228 85.1
Pp3c1_5030 Physcomitrium patens HOM05D005364 ORTHO05D006554 2.9e-74 282.3 246 64.2
Mapoly0062s0092 Marchantia polymorpha HOM05D005364 ORTHO05D006554 1.0e-34 151.0 236 39.4
Oeu001555.1 Olea europaea HOM05D005364 ORTHO05D006554 2.7e-27 126.3 230 35.7
CDE08G0765 Ceratophyllum demersum HOM05D005364 ORTHO05D006554 3.5e-27 125.9 234 36.3
HPP92_019392 Vanilla planifolia HOM05D005364 ORTHO05D006554 3.9e-26 122.5 233 33.9
CARHR187620 Cardamine hirsuta HOM05D005364 ORTHO05D006554 8.6e-26 121.3 227 34.8
Nn5g28547 Nelumbo nucifera HOM05D005364 ORTHO05D006554 8.6e-26 121.3 231 37.2
PGR142G4297 Punica granatum HOM05D005364 ORTHO05D006554 1.5e-25 120.6 231 35.9
ATR0138G016 Amborella trichopoda HOM05D005364 ORTHO05D006554 1.9e-25 120.2 232 33.6
CSS0018960 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 4.3e-25 119.0 228 36.0
CSS0048679 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 4.3e-25 119.0 228 36.0
CDE02G4564 Ceratophyllum demersum HOM05D005364 ORTHO05D006554 4.3e-25 119.0 233 34.8
TPR.G33301 Trifolium pratense HOM05D005364 ORTHO05D006554 5.6e-25 118.6 232 34.9
Ah.05g169340 Amaranthus hybridus HOM05D005364 ORTHO05D006554 1.6e-24 117.1 230 34.8
AT5G25800 Arabidopsis thaliana HOM05D005364 ORTHO05D006554 1.6e-24 117.1 226 34.1
Thhalv10003904m.g Eutrema salsugineum HOM05D005364 ORTHO05D006554 1.6e-24 117.1 232 34.5
Ciclev10000720m.g Citrus clementina HOM05D005364 ORTHO05D006554 2.8e-24 116.3 231 35.5
MBI03_g35292_MAGBIO Magnolia biondii HOM05D005364 ORTHO05D006554 2.8e-24 116.3 234 33.3
Lalb_Chr25g0281671 Lupinus albus HOM05D005364 ORTHO05D006554 4.7e-24 115.5 229 33.6
Medtr1g029410 Medicago truncatula HOM05D005364 ORTHO05D006554 4.7e-24 115.5 227 33.5
Sp2g21830 Schrenkiella parvula HOM05D005364 ORTHO05D006554 4.7e-24 115.5 234 34.2
Eucgr.F02755 Eucalyptus grandis HOM05D005364 ORTHO05D006554 6.2e-24 115.2 232 33.2
Hma1.2p1_0107F.1_g051330 Hydrangea macrophylla HOM05D005364 ORTHO05D006554 6.2e-24 115.2 231 34.2
Lj1g0018455 Lotus japonicus HOM05D005364 ORTHO05D006554 6.2e-24 115.2 230 34.3
TAR628G1468 Trochodendron aralioides HOM05D005364 ORTHO05D006554 6.2e-24 115.2 231 35.1
AL6G37660 Arabidopsis lyrata HOM05D005364 ORTHO05D006554 8.1e-24 114.8 226 34.1
Glyma.13G037300 Glycine max HOM05D005364 ORTHO05D006554 8.1e-24 114.8 229 34.5
Lalb_Chr06g0173651 Lupinus albus HOM05D005364 ORTHO05D006554 1.1e-23 114.4 229 32.3
Aqoxy6G00357 Aquilegia oxysepala HOM05D005364 ORTHO05D006554 1.4e-23 114.0 231 33.8
CiPaw.15G022800 Carya illinoinensis HOM05D005364 ORTHO05D006554 1.8e-23 113.6 232 33.2
Migut.C01101 Erythranthe guttata HOM05D005364 ORTHO05D006554 1.8e-23 113.6 229 33.6
RcHm_v2.0_Chr6g0277571 Rosa chinensis HOM05D005364 ORTHO05D006554 1.8e-23 113.6 232 34.1
THA.LOC104798861 Tarenaya hassleriana HOM05D005364 ORTHO05D006554 2.3e-23 113.2 232 34.9
FAN24G1520 Fragaria x ananassa HOM05D005364 ORTHO05D006554 3.1e-23 112.8 234 34.6
Glyma.14G119200 Glycine max HOM05D005364 ORTHO05D006554 3.1e-23 112.8 229 32.8
Aa31LG11G4810 Aethionema arabicum HOM05D005364 ORTHO05D006554 4.0e-23 112.5 232 33.6
Psat6g039520 Pisum sativum HOM05D005364 ORTHO05D006554 4.0e-23 112.5 231 33.3
arahy.Tifrunner.gnm1.ann1.M37XHZ Arachis hypogaea HOM05D005364 ORTHO05D006554 5.2e-23 112.1 262 32.8
Sc15g0007420 Simmondsia chinensis HOM05D005364 ORTHO05D006554 8.9e-23 111.3 228 33.3
Sc15g0007440 Simmondsia chinensis HOM05D001552 ORTHO05D003294 8.9e-23 111.3 228 33.3
Prupe.8G016300 Prunus persica HOM05D005364 ORTHO05D006554 1.2e-22 110.9 232 34.1
A02p39590 Brassica napus HOM05D005364 ORTHO05D006554 1.5e-22 110.5 231 32.5
SalBow7G3071 Salvia bowleyana HOM05D005364 ORTHO05D006554 1.5e-22 110.5 228 33.3
BcaB07g29980 Brassica carinata HOM05D005364 ORTHO05D006554 2.0e-22 110.2 229 33.6
Carub.0006s2357 Capsella rubella HOM05D005364 ORTHO05D006554 2.6e-22 109.8 229 33.6
FAN27G1309 Fragaria x ananassa HOM05D005364 ORTHO05D006554 2.6e-22 109.8 233 33.5
MSTRG.1383 Avicennia marina HOM05D005364 ORTHO05D006554 3.4e-22 109.4 233 33.0
Manes.18G085705 Manihot esculenta HOM05D005364 ORTHO05D006554 3.4e-22 109.4 234 34.2
BraA02t08927Z Brassica rapa HOM05D005364 ORTHO05D006554 4.4e-22 109.0 227 32.2
CSS0030633 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 4.4e-22 109.0 229 32.8
Sed0004836 Sechium edule HOM05D005364 ORTHO05D006554 4.4e-22 109.0 232 32.3
Dinv25792 Davidia involucrata HOM05D005364 ORTHO05D006554 5.8e-22 108.6 231 34.6
SGA_v2.0_scaffold24G10388 Striga asiatica HOM05D005364 ORTHO05D006554 5.8e-22 108.6 228 32.0
Cc10_g13140 Coffea canephora HOM05D005364 ORTHO05D006554 7.5e-22 108.2 234 31.6
Peaxi162Scf00066g01936 Petunia axillaris HOM05D005364 ORTHO05D006554 7.5e-22 108.2 231 30.7
BcaNung04840 Brassica carinata HOM05D005364 ORTHO05D006554 9.9e-22 107.8 233 31.8
Cfa018384 Carpinus fangiana HOM05D005364 ORTHO05D006554 9.9e-22 107.8 233 33.9
Phvul.001G064400 Phaseolus vulgaris HOM05D005364 ORTHO05D006554 1.3e-21 107.5 232 31.5
Actinidia03441 Actinidia chinensis HOM05D005364 ORTHO05D006554 1.7e-21 107.1 234 33.8
ECA232G1379 Erigeron canadensis HOM05D005364 ORTHO05D006554 1.7e-21 107.1 229 32.8
C07p42120 Brassica napus HOM05D005364 ORTHO05D006554 2.9e-21 106.3 232 30.6
Ca_12657_v3 Cicer arietinum L. HOM05D005364 ORTHO05D003291 2.9e-21 106.3 191 34.6
Duzib041G0781 Durio zibethinus HOM05D005364 ORTHO05D006554 2.9e-21 106.3 231 34.2
FAN15G1836 Fragaria x ananassa HOM05D005364 ORTHO05D006554 2.9e-21 106.3 233 33.0
PSO675G4293 Papaver somniferum HOM05D005364 ORTHO05D006554 2.9e-21 106.3 226 31.9
TWI34G0076 Tripterygium wilfordii HOM05D005364 ORTHO05D006554 2.9e-21 106.3 232 34.1
BcaC03g17892 Brassica carinata HOM05D005364 ORTHO05D006554 3.7e-21 105.9 229 31.0
BcaNung03925 Brassica carinata HOM05D005364 ORTHO05D006554 3.7e-21 105.9 232 30.6
MD10G1011100 Malus domestica HOM05D005364 ORTHO05D006554 3.7e-21 105.9 232 33.2
C02p59350 Brassica napus HOM05D005364 ORTHO05D006554 4.9e-21 105.5 229 31.0
HanXRQChr15g0484621 Helianthus annuus HOM05D005364 ORTHO05D006554 4.9e-21 105.5 235 32.3
A06p36390 Brassica napus HOM05D005364 ORTHO05D006554 6.4e-21 105.1 232 30.6
MELO3C010582.2 Cucumis melo HOM05D005364 ORTHO05D006554 6.4e-21 105.1 234 32.9
CsaV3_6G035590 Cucumis sativus L. HOM05D005364 ORTHO05D006554 6.4e-21 105.1 234 32.5
MD05G1011300 Malus domestica HOM05D005364 ORTHO05D006554 6.4e-21 105.1 232 33.2
PSO541G2378 Papaver somniferum HOM05D005364 ORTHO05D006554 6.4e-21 105.1 226 31.0
Potri.005G186600 Populus trichocarpa HOM05D005364 ORTHO05D006554 8.3e-21 104.8 231 32.5
Sopen04g026510 Solanum pennellii HOM05D005364 ORTHO05D006554 8.3e-21 104.8 231 30.7
BolC2t11997H Brassica oleracea HOM05D005364 ORTHO05D006554 1.4e-20 104.0 229 30.6
CANSAT25G0570 Cannabis sativa HOM05D005364 ORTHO05D006554 1.4e-20 104.0 231 32.0
CAN.G657.4 Capsicum annuum HOM05D005364 ORTHO05D006554 1.4e-20 104.0 233 30.5
Gohir.D02G074200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 1.4e-20 104.0 231 33.8
Gorai.005G083600 Gossypium raimondii HOM05D005364 ORTHO05D006554 1.4e-20 104.0 231 33.8
FvH4_2g15020 Fragaria vesca HOM05D005364 ORTHO05D006554 1.9e-20 103.6 234 32.9
Gohir.A02G068200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 2.4e-20 103.2 231 33.8
BolC7t44743H Brassica oleracea HOM05D005364 ORTHO05D006554 3.2e-20 102.8 231 30.3
DCAR_001120 Daucus carota HOM05D005364 ORTHO05D006554 4.1e-20 102.4 229 31.9
Zm00001eb409200 Zea mays HOM05D005364 ORTHO05D006554 4.1e-20 102.4 228 30.3
BraA06t26562Z Brassica rapa HOM05D005364 ORTHO05D006554 5.4e-20 102.1 231 29.9
Lsat_1_v5_gn_9_124401 Lactuca sativa HOM05D005364 ORTHO05D006554 5.4e-20 102.1 231 31.6
Atru.chr13.1665 Acer truncatum HOM05D005364 ORTHO05D006554 7.1e-20 101.7 231 32.0
DCAR_010238 Daucus carota HOM05D005364 ORTHO05D006554 1.2e-19 100.9 231 32.9
Rhsim11G0077000 Rhododendron simsii HOM05D005364 ORTHO05D006554 1.2e-19 100.9 241 32.0
Thecc.08G141100 Theobroma cacao HOM05D005364 ORTHO05D006554 1.6e-19 100.5 227 32.6
Solyc04g064560.4 Solanum lycopersicum HOM05D005364 ORTHO05D006554 2.1e-19 100.1 227 30.4
COL.COLO4_33812 Corchorus olitorius HOM05D005364 ORTHO05D006554 3.5e-19 99.4 192 34.4
GSVIVG01010009001 Vitis vinifera HOM05D005364 ORTHO05D006554 6.0e-19 98.6 231 32.0
Haze_17688 Corylus avellana HOM05D005364 ORTHO05D006554 2.3e-18 96.7 255 31.0
Dinv41139 Davidia involucrata HOM05D005364 ORTHO05D006554 2.3e-18 96.7 183 37.2
Nitab4.5_0000174g0280 Nicotiana tabacum HOM05D005364 ORTHO05D006554 2.5e-17 93.2 224 30.4
Nitab4.5_0007147g0010 Nicotiana tabacum HOM05D005364 ORTHO05D006554 3.3e-17 92.8 224 30.4
arahy.Tifrunner.gnm1.ann1.3V9M2M Arachis hypogaea HOM05D005364 ORTHO05D006554 4.3e-17 92.4 191 34.6
CBR_g39514 Chara braunii HOM05D005364 ORTHO05D006554 7.3e-17 91.7 246 31.3
Cpa.g.sc26.95 Carica papaya HOM05D005364 ORTHO05D006554 2.1e-16 90.1 213 32.9
EL10Ac1g01440 Beta vulgaris HOM05D005364 ORTHO05D006554 8.1e-16 88.2 203 32.0
vmacro00886 Vaccinium macrocarpon HOM05D005364 ORTHO05D006554 1.8e-15 87.0 279 29.0
Lj4C689G10 Lonicera japonica HOM05D005364 ORTHO05D006554 2.4e-15 86.7 233 30.9
QL09p029051 Quercus lobata HOM05D005364 ORTHO05D006554 2.4e-15 86.7 204 31.4
SEGI_18953 Sequoiadendron giganteum HOM05D005364 ORTHO05D006554 5.2e-15 85.5 161 32.9
AagrBONN_evm.TU.Sc2ySwM_344.2478 Anthoceros agrestis HOM05D005364 ORTHO05D006554 1.3e-13 80.9 92 47.8
ClCG08G002730 Citrullus lanatus HOM05D005364 ORTHO05D006554 1.7e-13 80.5 199 29.1
Sabra05G0142500 Salix brachista HOM05D005364 ORTHO05D006554 1.7e-13 80.5 208 30.3
PRCOL_00002441 Prasinoderma coloniale HOM05D005364 ORTHO05D006554 1.2e-11 74.3 249 28.9
Potri.002G073300 Populus trichocarpa HOM05D005364 ORTHO05D006554 6.0e-11 72.0 201 30.8
Os12g0188900 Oryza sativa ssp. japonica HOM05D005364 ORTHO05D006554 7.8e-11 71.6 90 41.1
Zm00001eb138630 Zea mays HOM05D005364 ORTHO05D006554 3.0e-10 69.7 228 26.8
VMungo0647G0736 Vigna mungo HOM05D005364 ORTHO05D006554 9.6e-09 64.7 164 30.5
HPP92_021466 Vanilla planifolia HOM05D005364 ORTHO05D006554 4.7e-08 62.4 165 26.7
Hund26737 Selenicereus undatus HOM05D008449 ORTHO05D010615 9.0e-07 58.2 177 25.4


User provided reference genes

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