Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.9e-75 285.8 149 100.0
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 5.8e-40 167.9 118 72.0
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 5.8e-40 167.9 118 72.0
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.8e-34 149.1 132 59.8
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 1.1e-33 147.1 142 55.6
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 1.2e-32 143.7 145 53.8
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.5e-27 125.9 140 52.9
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.8e-25 119.8 146 46.6
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 7.6e-24 114.4 119 53.8
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 9.0e-17 90.9 141 39.7
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 4.6e-13 78.6 142 36.6
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 1.0e-12 77.4 137 35.8
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 1.3e-12 77.0 144 32.6
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 1.3e-12 77.0 137 35.8
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 3.0e-12 75.9 137 37.2
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 3.0e-12 75.9 137 35.0
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 8.7e-12 74.3 142 31.7
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 1.9e-11 73.2 137 32.1
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 3.3e-11 72.4 121 38.0
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 3.3e-11 72.4 140 34.3
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.3e-11 72.4 140 34.3
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 4.3e-11 72.0 140 35.7
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 9.6e-11 70.9 140 35.0
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 1.3e-10 70.5 126 34.9
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 1.6e-10 70.1 121 37.2
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 1.6e-10 70.1 124 30.6
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 3.7e-10 68.9 139 36.0
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 3.7e-10 68.9 145 33.8
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 3.7e-10 68.9 142 34.5
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 4.8e-10 68.6 126 35.7
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 8.1e-10 67.8 137 34.3
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 8.1e-10 67.8 140 33.6
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 8.1e-10 67.8 119 34.5
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 1.4e-09 67.0 137 31.4
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 2.4e-09 66.2 148 31.8
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 4.0e-09 65.5 137 33.6
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 5.3e-09 65.1 140 35.0
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 6.9e-09 64.7 124 34.7
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 9.0e-09 64.3 124 34.7
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 9.0e-09 64.3 123 35.0
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 1.2e-08 63.9 142 33.8
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 1.2e-08 63.9 121 35.5
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 1.2e-08 63.9 83 44.6
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 1.2e-08 63.9 137 33.6
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 1.5e-08 63.5 118 35.6
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 2.0e-08 63.2 139 33.1
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 2.0e-08 63.2 134 31.3
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 2.0e-08 63.2 99 39.4
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 2.6e-08 62.8 123 33.3
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 2.6e-08 62.8 139 31.7
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 3.4e-08 62.4 125 32.8
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 3.4e-08 62.4 140 32.9
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 3.4e-08 62.4 140 32.9
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 3.4e-08 62.4 118 36.4
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 4.5e-08 62.0 140 32.9
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 4.5e-08 62.0 98 36.7
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 5.8e-08 61.6 137 28.5
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 5.8e-08 61.6 119 32.8
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 7.6e-08 61.2 119 32.8
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 2.9e-07 59.3 123 33.3
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 2.9e-07 59.3 123 33.3
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 3.8e-07 58.9 135 32.6
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 8.4e-07 57.8 121 29.8
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 8.4e-07 57.8 139 30.9
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.4e-06 57.0 94 37.2
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.4e-06 57.0 94 37.2
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 1.4e-06 57.0 94 37.2
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 1.9e-06 56.6 102 32.4
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 7.1e-06 54.7 119 30.3


User provided reference genes

Program Settings