Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 5.6e-43 177.2 88 100.0
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 5.0e-15 84.3 76 53.9
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 8.2e-10 67.0 82 43.9
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 1.1e-09 66.6 74 41.9
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 1.1e-09 66.6 74 44.6
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 2.4e-09 65.5 74 45.9
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 2.4e-09 65.5 74 41.9
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 2.4e-09 65.5 74 41.9
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 2.4e-09 65.5 74 41.9
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 4.1e-09 64.7 74 43.2
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 4.1e-09 64.7 74 43.2
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 6.9e-09 63.9 74 45.9
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 6.9e-09 63.9 74 43.2
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 9.1e-09 63.5 74 44.6
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 1.2e-08 63.2 74 43.2
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 1.2e-08 63.2 74 43.2
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 1.5e-08 62.8 74 44.6
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 2.0e-08 62.4 74 41.9
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 2.0e-08 62.4 74 41.9
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 2.0e-08 62.4 74 44.6
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 2.0e-08 62.4 74 44.6
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 2.0e-08 62.4 74 41.9
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 2.6e-08 62.0 74 43.2
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 2.6e-08 62.0 74 40.5
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 3.4e-08 61.6 74 41.9
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 3.4e-08 61.6 74 41.9
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 3.4e-08 61.6 74 41.9
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 3.4e-08 61.6 74 44.6
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 4.5e-08 61.2 74 41.9
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 4.5e-08 61.2 74 41.9
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 5.9e-08 60.8 74 43.2
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 5.9e-08 60.8 74 40.5
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 5.9e-08 60.8 74 44.6
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 7.7e-08 60.5 74 43.2
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 7.7e-08 60.5 75 40.0
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 7.7e-08 60.5 74 41.9
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 7.7e-08 60.5 74 41.9
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 1.0e-07 60.1 74 41.9
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 1.0e-07 60.1 74 43.2
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 1.0e-07 60.1 74 43.2
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 1.0e-07 60.1 74 43.2
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 1.0e-07 60.1 74 41.9
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 1.3e-07 59.7 75 40.0
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 1.3e-07 59.7 74 40.5
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 1.3e-07 59.7 74 40.5
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 1.3e-07 59.7 75 40.0
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 1.3e-07 59.7 74 44.6
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 1.3e-07 59.7 74 43.2
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 1.7e-07 59.3 74 41.9
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 1.7e-07 59.3 74 43.2
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 2.2e-07 58.9 74 40.5
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 2.2e-07 58.9 74 40.5
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 2.2e-07 58.9 74 44.6
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 2.9e-07 58.5 74 41.9
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 2.9e-07 58.5 74 40.5
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 2.9e-07 58.5 74 40.5
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 2.9e-07 58.5 74 40.5
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 2.9e-07 58.5 74 43.2
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 2.9e-07 58.5 74 40.5
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 3.8e-07 58.2 74 40.5
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 5.0e-07 57.8 74 39.2
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 6.5e-07 57.4 74 40.5
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 8.5e-07 57.0 74 37.8
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 8.5e-07 57.0 74 40.5
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 8.5e-07 57.0 72 43.1
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 1.1e-06 56.6 74 39.2
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 1.1e-06 56.6 74 41.9
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 1.4e-06 56.2 74 43.2
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 2.5e-06 55.5 74 36.5
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 2.5e-06 55.5 74 43.2
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 2.5e-06 55.5 74 39.2
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 3.2e-06 55.1 74 39.2
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 4.2e-06 54.7 74 39.2
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 4.2e-06 54.7 72 41.7
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 7.2e-06 53.9 74 37.8
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 9.4e-06 53.5 74 37.8
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 9.4e-06 53.5 74 39.2


User provided reference genes

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