Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 0.0e+00 1273.5 667 100.0
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 8.5e-59 232.6 675 29.6
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 8.5e-59 232.6 682 30.2
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 1.1e-58 232.3 690 29.3
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 1.5e-58 231.9 674 29.1
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 3.2e-58 230.7 671 29.1
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.2e-58 230.3 679 30.0
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 7.2e-58 229.6 654 29.8
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 7.2e-58 229.6 668 28.7
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 9.5e-58 229.2 549 32.1
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 1.2e-57 228.8 672 28.7
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 8.0e-57 226.1 635 29.9
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 3.0e-56 224.2 633 29.9
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 6.8e-56 223.0 674 28.8
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 4.4e-55 220.3 649 29.3
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.4e-55 220.3 676 28.7
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 2.2e-54 218.0 615 29.4
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 4.9e-54 216.9 693 28.9
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 2.4e-53 214.5 643 29.4
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 7.0e-53 213.0 673 28.4
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 1.2e-52 212.2 632 29.0
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 1.2e-52 212.2 709 28.6
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 3.5e-52 210.7 650 29.1
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 4.5e-52 210.3 672 27.8
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 2.3e-51 208.0 657 27.5
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 2.9e-51 207.6 629 28.5
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 3.8e-51 207.2 707 27.4
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 6.6e-51 206.5 629 28.3
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 6.6e-51 206.5 698 29.5
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 6.6e-51 206.5 674 28.0
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 1.5e-50 205.3 675 29.5
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.5e-50 205.3 695 27.1
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 1.5e-50 205.3 627 29.2
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 1.9e-50 204.9 687 28.2
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 4.3e-50 203.8 675 28.4
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 9.5e-50 202.6 519 29.5
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 9.5e-50 202.6 620 28.2
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 1.6e-49 201.8 627 27.1
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 2.8e-49 201.1 695 28.9
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.0e-48 199.1 631 28.4
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 2.3e-48 198.0 615 27.6
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 2.3e-48 198.0 532 29.1
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 6.8e-48 196.4 569 29.9
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 1.5e-47 195.3 579 29.5
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 2.0e-47 194.9 545 29.5
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 2.0e-47 194.9 549 30.1
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 3.4e-47 194.1 678 26.5
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 4.4e-47 193.7 551 29.2
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 4.4e-47 193.7 580 29.3
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 9.8e-47 192.6 676 26.6
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 9.8e-47 192.6 621 28.5
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 9.8e-47 192.6 653 27.6
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 1.7e-46 191.8 614 26.1
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 1.7e-46 191.8 674 27.0
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 1.7e-46 191.8 614 26.1
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 1.7e-46 191.8 653 27.3
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 2.9e-46 191.0 614 26.1
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 2.9e-46 191.0 690 26.8
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 6.4e-46 189.9 620 27.3
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 1.4e-45 188.7 647 27.8
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 4.1e-45 187.2 544 27.8
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 5.4e-45 186.8 675 27.0
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 1.2e-44 185.7 631 27.7
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 1.2e-44 185.7 595 28.9
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 2.7e-44 184.5 572 28.3
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 3.5e-44 184.1 616 26.5
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 3.5e-44 184.1 706 27.6
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 2.3e-43 181.4 684 27.0
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 3.9e-43 180.6 719 26.4
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 2.1e-41 174.9 562 27.9
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 6.2e-41 173.3 615 26.8
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 1.4e-40 172.2 694 26.1
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 1.5e-39 168.7 725 25.4
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 1.5e-39 168.7 688 26.7
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 2.6e-39 167.9 717 24.3
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.3e-38 165.6 664 27.0
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 6.4e-38 163.3 506 28.7
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 6.4e-38 163.3 637 26.4
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 1.6e-36 158.7 431 30.9
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 1.1e-32 146.0 441 28.1
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 3.1e-32 144.4 345 32.5
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 1.1e-29 136.0 511 25.0
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.4e-29 135.6 375 30.9
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 1.3e-27 129.0 375 28.0
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 3.3e-26 124.4 430 27.0
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 7.3e-26 123.2 333 29.4
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 1.4e-24 119.0 387 28.4
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 7.6e-23 113.2 298 32.2
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 1.9e-21 108.6 301 28.2
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 2.5e-18 98.2 310 28.4
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 3.3e-18 97.8 229 34.5
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 5.6e-18 97.1 277 28.5
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 2.1e-17 95.1 286 29.7
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 4.9e-14 84.0 293 29.4
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 1.4e-13 82.4 258 29.5
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 1.4e-13 82.4 139 35.3
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 9.3e-13 79.7 233 30.5
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 2.1e-12 78.6 234 29.9
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 2.1e-09 68.6 202 28.2
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 2.4e-08 65.1 153 32.7
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 2.4e-08 65.1 186 31.2
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 4.0e-08 64.3 84 32.1
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 6.9e-08 63.5 306 21.9
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 2.0e-07 62.0 282 27.3
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 4.9e-06 57.4 124 33.9
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 8.4e-06 56.6 195 27.2


User provided reference genes

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