Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_21000 Physcomitrium patens HOM05D003016 ORTHO05D317923 3.1e-99 365.2 190 100.0
Pp3c6_5930 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.5e-40 169.5 139 68.3
Pp3c2_13120 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.0e-36 157.5 139 64.0
Pp3c6_5920 Physcomitrium patens HOM05D003016 ORTHO05D009718 8.4e-36 154.5 127 69.3
Pp3c6_8150 Physcomitrium patens HOM05D003016 ORTHO05D000239 3.2e-35 152.5 149 59.7
Pp3c20_15960 Physcomitrium patens HOM05D003016 ORTHO05D009718 7.1e-35 151.4 144 61.1
Pp3c9_10230 Physcomitrium patens HOM05D003016 ORTHO05D311455 1.2e-34 150.6 153 58.8
Pp3c6_5450 Physcomitrium patens HOM05D003016 ORTHO05D000239 2.1e-34 149.8 150 58.0
Pp3c6_11870 Physcomitrium patens HOM05D003016 ORTHO05D009718 7.9e-34 147.9 149 57.7
Pp3c9_16400 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.9e-32 143.3 134 63.4
Pp3c2_12940 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.8e-30 136.7 150 55.3
Pp3c15_16800 Physcomitrium patens HOM05D003016 ORTHO05D000239 9.0e-30 134.4 157 53.5
Pp3c6_5610 Physcomitrium patens HOM05D003016 ORTHO05D009718 7.6e-29 131.3 125 59.2
Pp3c12_3810 Physcomitrium patens HOM05D003016 ORTHO05D313243 1.3e-28 130.6 116 62.9
Pp3c6_5620 Physcomitrium patens HOM05D003016 ORTHO05D310275 3.8e-28 129.0 122 59.8
Pp3c15_2320 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.9e-27 126.7 124 58.1
Pp3c2_12950 Physcomitrium patens HOM05D003016 ORTHO05D000239 7.9e-26 121.3 116 59.5
Pp3c8_17870 Physcomitrium patens HOM05D003016 ORTHO05D314585 1.3e-25 120.6 123 57.7
Pp3c15_960 Physcomitrium patens HOM05D003016 ORTHO05D000239 2.5e-24 116.3 117 55.6
Pp3c17_8750 Physcomitrium patens HOM05D003016 ORTHO05D000239 4.1e-22 109.0 126 46.0
Pp3c21_8750 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.0e-20 104.4 134 44.8
Pp3c21_8760 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.0e-20 104.4 134 44.8
Pp3c5_2300 Physcomitrium patens HOM05D003016 ORTHO05D309912 1.3e-20 104.0 104 55.8
Pp3c17_14980 Physcomitrium patens HOM05D003016 ORTHO05D318893 2.5e-19 99.8 85 65.9
Pp3c7_21880 Physcomitrium patens HOM05D003016 ORTHO05D312108 2.5e-19 99.8 154 42.9
Pp3c13_19900 Physcomitrium patens HOM05D003016 ORTHO05D000239 7.9e-18 94.7 134 44.0
Pp3c9_24950 Physcomitrium patens HOM05D003016 ORTHO05D318563 7.9e-18 94.7 121 45.5
Pp3c13_2900 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.0e-17 94.4 134 41.8
Pp3c13_2910 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.0e-17 94.4 134 41.8
Pp3c16_23160 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.0e-17 94.4 147 39.5
Pp3c21_15570 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.3e-17 93.2 147 40.8
Pp3c17_20870 Physcomitrium patens HOM05D003016 ORTHO05D009718 5.1e-17 92.0 147 40.1
Pp3c17_20880 Physcomitrium patens HOM05D003016 ORTHO05D009718 5.1e-17 92.0 147 40.1
Pp3c18_4530 Physcomitrium patens HOM05D003016 ORTHO05D009718 8.8e-17 91.3 147 39.5
Pp3c20_15850 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.1e-16 90.9 98 55.1
Pp3c18_2880 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.5e-16 90.5 150 38.7
Pp3c20_21210 Physcomitrium patens HOM05D003016 ORTHO05D000239 5.7e-16 88.6 139 40.3
Pp3c14_1111 Physcomitrium patens HOM05D003016 ORTHO05D009718 9.7e-16 87.8 147 39.5
Pp3c11_21080 Physcomitrium patens HOM05D003016 ORTHO05D000239 2.2e-15 86.7 54 74.1
Pp3c20_20770 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.2e-15 86.7 97 52.6
Pp3c13_3150 Physcomitrium patens HOM05D003016 ORTHO05D000239 3.7e-15 85.9 146 36.3
Pp3c2_12960 Physcomitrium patens HOM05D003016 ORTHO05D009718 3.7e-15 85.9 66 66.7
Pp3c21_18280 Physcomitrium patens HOM05D003016 ORTHO05D000239 4.8e-15 85.5 143 38.5
Pp3c17_21740 Physcomitrium patens HOM05D003016 ORTHO05D009718 6.3e-15 85.1 147 39.5
Pp3c15_2330 Physcomitrium patens HOM05D003016 ORTHO05D009718 8.2e-15 84.7 66 65.2
Pp3c18_2410 Physcomitrium patens HOM05D003016 ORTHO05D009718 8.2e-15 84.7 150 36.7
Pp3c12_3820 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.1e-14 84.3 66 63.6
Pp3c13_21290 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.1e-14 84.3 163 37.4
Pp3c13_15200 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.4e-14 84.0 147 37.4
Pp3c13_2610 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.4e-14 84.0 146 36.3
Pp3c13_15270 Physcomitrium patens HOM05D003016 ORTHO05D009718 3.1e-14 82.8 147 38.1
Pp3c20_20760 Physcomitrium patens HOM05D003016 ORTHO05D000239 3.1e-14 82.8 53 75.5
Pp3c13_21810 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.5e-13 80.5 147 38.8
Pp3c20_15970 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.0e-13 80.1 105 45.7
Pp3c8_2150 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.0e-13 80.1 191 34.0
Pp3c15_970 Physcomitrium patens HOM05D003016 ORTHO05D009718 3.4e-13 79.3 66 60.6
Pp3c21_3920 Physcomitrium patens HOM05D003016 ORTHO05D000239 3.4e-13 79.3 128 43.0
Pp3c17_21730 Physcomitrium patens HOM05D003016 ORTHO05D009718 7.7e-13 78.2 142 38.0
Pp3c6_6000 Physcomitrium patens HOM05D003016 ORTHO05D318268 1.3e-12 77.4 54 70.4
Pp3c14_13230 Physcomitrium patens HOM05D003016 ORTHO05D312549 3.8e-12 75.9 146 35.6
Pp3c21_6260 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.9e-11 73.6 106 46.2
Pp3c20_22019 Physcomitrium patens HOM05D003016 ORTHO05D318622 7.2e-11 71.6 116 38.8
Pp3c8_2020 Physcomitrium patens HOM05D003016 ORTHO05D310070 1.2e-10 70.9 105 43.8
Pp3c13_21690 Physcomitrium patens HOM05D003016 ORTHO05D009718 3.6e-10 69.3 52 67.3
Pp3c13_22110 Physcomitrium patens HOM05D003016 ORTHO05D316010 4.7e-10 68.9 152 33.6
Pp3c14_6750 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.0e-09 67.8 147 36.1
Pp3c20_21220 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.0e-09 67.8 130 36.2
Pp3c26_2480 Physcomitrium patens HOM05D003016 ORTHO05D309986 1.8e-09 67.0 50 66.0
Pp3c11_21070 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.3e-09 66.6 54 57.4
Pp3c11_3280 Physcomitrium patens HOM05D003016 ORTHO05D314275 6.7e-09 65.1 115 38.3
Pp3c13_3110 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.1e-08 64.3 83 41.0
Pp3c18_18616 Physcomitrium patens HOM05D003016 ORTHO05D009718 4.4e-08 62.4 85 42.4
Pp3c21_14710 Physcomitrium patens HOM05D003016 ORTHO05D316218 4.4e-08 62.4 130 34.6
Pp3s794_20 Physcomitrium patens HOM05D000005 ORTHO05D000239 1.7e-07 60.5 34 85.3
Pp3c3_11530 Physcomitrium patens HOM05D003016 ORTHO05D318603 3.7e-07 59.3 136 32.4
Eucgr.H03741 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.3e-07 58.5 123 32.5
Phvul.011G193500 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 6.3e-07 58.5 139 32.4
Pp3c6_12460 Physcomitrium patens HOM05D003016 ORTHO05D310406 6.3e-07 58.5 49 61.2
Phvul.011G192100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 8.2e-07 58.2 149 28.2
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.1e-06 57.8 157 28.0
Eucgr.H03750 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.4e-06 57.4 154 33.8
Glyma.19G139950 Glycine max HOM05D000009 ORTHO05D000008 1.4e-06 57.4 152 27.6
Phvul.011G198400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.8e-06 57.0 130 31.5
Pp3c13_2920 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.8e-06 57.0 67 41.8
arahy.Tifrunner.gnm1.ann1.28MDS2 Arachis hypogaea HOM05D000009 ORTHO05D000008 2.4e-06 56.6 141 34.8
arahy.Tifrunner.gnm1.ann1.FZ3B5X Arachis hypogaea HOM05D000009 ORTHO05D000008 2.4e-06 56.6 141 34.8
Eucgr.H03679 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.4e-06 56.6 157 33.1
Phvul.011G192400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.4e-06 56.6 149 30.2
Phvul.011G193100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.4e-06 56.6 158 31.0
Pp3c13_19890 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.4e-06 56.6 57 47.4
Pp3c13_2950 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.4e-06 56.6 67 41.8
arahy.Tifrunner.gnm1.ann1.AV4GH3 Arachis hypogaea HOM05D000009 ORTHO05D000008 3.1e-06 56.2 139 33.1
arahy.Tifrunner.gnm1.ann1.K4R7NK Arachis hypogaea HOM05D000009 ORTHO05D000008 3.1e-06 56.2 139 33.1
BcaNung02640 Brassica carinata HOM05D000005 ORTHO05D000012 3.1e-06 56.2 139 29.5
Migut.D01768 Erythranthe guttata HOM05D000011 ORTHO05D000018 3.1e-06 56.2 147 27.9
Pp3c11_23790 Physcomitrium patens HOM05D003016 ORTHO05D308650 3.1e-06 56.2 45 57.8
VMungo1127G0436 Vigna mungo HOM05D000009 ORTHO05D000008 3.1e-06 56.2 129 31.0
Phvul.004G036800 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.1e-06 55.8 123 33.3
Phvul.011G191600 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.1e-06 55.8 130 30.8
Phvul.011G196000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.1e-06 55.8 142 34.5
Pp3c13_15190 Physcomitrium patens HOM05D003016 ORTHO05D009718 4.1e-06 55.8 66 42.4
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 4.1e-06 55.8 134 34.3
TPR.G29041 Trifolium pratense HOM05D000005 ORTHO05D000012 4.1e-06 55.8 219 26.9
Phvul.011G193966 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.3e-06 55.5 128 33.6
Pp3c1_17930 Physcomitrium patens HOM05D000005 ORTHO05D000239 5.3e-06 55.5 140 27.1
VMungo1127G1765 Vigna mungo HOM05D000009 ORTHO05D000008 5.3e-06 55.5 144 31.2
AT5G36930 Arabidopsis thaliana HOM05D000005 ORTHO05D000012 7.0e-06 55.1 121 34.7
arahy.Tifrunner.gnm1.ann1.8HC6C5 Arachis hypogaea HOM05D000009 ORTHO05D000008 7.0e-06 55.1 143 34.3
arahy.Tifrunner.gnm1.ann1.VZQ2V7 Arachis hypogaea HOM05D000009 ORTHO05D000008 7.0e-06 55.1 143 34.3
Eucgr.H03796 Eucalyptus grandis HOM05D000005 ORTHO05D000012 7.0e-06 55.1 121 32.2
FAN04G1780 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.0e-06 55.1 147 24.5
Lj3g0007540 Lotus japonicus HOM05D000009 ORTHO05D000008 7.0e-06 55.1 142 30.3
Phvul.011G198000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 7.0e-06 55.1 140 30.0
Pp3c25_5920 Physcomitrium patens HOM05D003016 ORTHO05D308189 7.0e-06 55.1 96 35.4
CAN.G1372.3 Capsicum annuum HOM05D000005 ORTHO05D000012 9.1e-06 54.7 141 28.4
Phvul.004G009154 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 9.1e-06 54.7 141 31.9
Phvul.011G191400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 9.1e-06 54.7 130 29.2
Phvul.011G191800 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 9.1e-06 54.7 130 29.2
Phvul.011G195300 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 9.1e-06 54.7 130 30.8
Phvul.011G202900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 9.1e-06 54.7 124 33.1
Pp3c11_13940 Physcomitrium patens HOM05D003016 ORTHO05D313315 9.1e-06 54.7 99 38.4
VMungo0331G0468 Vigna mungo HOM05D000009 ORTHO05D000008 9.1e-06 54.7 129 30.2


User provided reference genes

Program Settings