Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_20720 Physcomitrium patens HOM05D009263 ORTHO05D011372 0.0e+00 1199.1 596 100.0
Pp3c7_19620 Physcomitrium patens HOM05D009263 ORTHO05D011372 9.3e-182 641.0 554 57.6
Pp3c10_3200 Physcomitrium patens HOM05D009263 ORTHO05D011372 1.1e-113 414.8 573 42.8
Pp3c1_25930 Physcomitrium patens HOM05D009263 ORTHO05D011372 3.3e-54 217.2 555 31.5
Pp3c15_19160 Physcomitrium patens HOM05D009263 ORTHO05D030457 1.2e-51 208.8 576 31.6
AagrBONN_evm.TU.Sc2ySwM_368.346 Anthoceros agrestis HOM05D009263 ORTHO05D011372 3.2e-49 200.7 510 33.3
Mapoly0156s0005 Marchantia polymorpha HOM05D009263 ORTHO05D011372 1.3e-45 188.7 588 28.1
Pp3c1_28510 Physcomitrium patens HOM05D009263 ORTHO05D030457 3.7e-45 187.2 499 29.9
Pp3c2_7620 Physcomitrium patens HOM05D009263 ORTHO05D030457 1.1e-44 185.7 512 29.5
AagrBONN_evm.TU.Sc2ySwM_368.870 Anthoceros agrestis HOM05D009263 ORTHO05D011372 4.1e-44 183.7 522 31.6
AagrBONN_evm.TU.Sc2ySwM_368.327 Anthoceros agrestis HOM05D009263 ORTHO05D011372 5.0e-42 176.8 558 31.2
AagrBONN_evm.TU.Sc2ySwM_368.326 Anthoceros agrestis HOM05D009263 ORTHO05D011372 5.5e-41 173.3 528 30.3
AagrBONN_evm.TU.Sc2ySwM_368.331 Anthoceros agrestis HOM05D009263 ORTHO05D011372 6.3e-37 159.8 440 30.7
AagrBONN_evm.TU.Sc2ySwM_368.328 Anthoceros agrestis HOM05D009263 ORTHO05D011372 1.4e-36 158.7 447 30.0
Pp3c1_26960 Physcomitrium patens HOM05D000054 ORTHO05D000286 2.0e-35 154.8 516 27.7
Pp3c27_4590 Physcomitrium patens HOM05D000054 ORTHO05D000286 3.8e-34 150.6 557 27.3
Pp3c20_5240 Physcomitrium patens HOM05D009263 ORTHO05D011372 5.5e-33 146.7 573 27.4
Mapoly0110s0042 Marchantia polymorpha HOM05D023156 ORTHO05D011372 2.7e-32 144.4 571 26.6
Pp3c10_2820 Physcomitrium patens HOM05D000054 ORTHO05D000286 4.7e-32 143.7 513 28.1
Pp3c9_4100 Physcomitrium patens HOM05D009263 ORTHO05D030457 8.8e-31 139.4 423 28.8
Mapoly0123s0042 Marchantia polymorpha HOM05D009263 ORTHO05D022912 1.4e-28 132.1 559 25.6
AagrBONN_evm.TU.Sc2ySwM_368.875 Anthoceros agrestis HOM05D009263 ORTHO05D011372 1.8e-28 131.7 412 30.3
Mapoly0200s0010 Marchantia polymorpha HOM05D023156 ORTHO05D011372 2.4e-28 131.3 418 25.6
SMO367G0281 Selaginella moellendorffii HOM05D011783 ORTHO05D011372 3.1e-28 131.0 553 26.4
AagrBONN_evm.TU.Sc2ySwM_368.869 Anthoceros agrestis HOM05D009263 ORTHO05D011372 5.3e-28 130.2 518 28.0
SMO367G0618 Selaginella moellendorffii HOM05D011783 ORTHO05D011372 9.1e-28 129.4 472 27.5
SMO367G0156 Selaginella moellendorffii HOM05D011783 ORTHO05D011372 1.6e-27 128.6 554 26.5
Pp3c10_2812 Physcomitrium patens HOM05D000054 ORTHO05D000286 2.0e-27 128.3 506 26.1
Mapoly0009s0220 Marchantia polymorpha HOM05D009263 ORTHO05D022912 2.9e-26 124.4 491 28.1
Mapoly0009s0226 Marchantia polymorpha HOM05D009263 ORTHO05D022912 1.9e-25 121.7 583 25.7
Mapoly0123s0041 Marchantia polymorpha HOM05D009263 ORTHO05D022912 1.9e-25 121.7 589 25.8
Mapoly0638s0001 Marchantia polymorpha HOM05D009263 ORTHO05D022912 9.4e-25 119.4 427 27.6
Pp3c22_5320 Physcomitrium patens HOM05D009263 ORTHO05D319260 9.4e-25 119.4 583 24.9
Pp3c6_25020 Physcomitrium patens HOM05D000054 ORTHO05D000286 1.6e-24 118.6 437 26.3
SMO367G0778 Selaginella moellendorffii HOM05D011783 ORTHO05D011372 5.2e-23 113.6 478 27.2
Pp3c16_12180 Physcomitrium patens HOM05D000054 ORTHO05D311762 1.0e-18 99.4 389 27.0
CBR_g34189 Chara braunii HOM05D009263 ORTHO05D011372 1.7e-18 98.6 533 25.1
Pp3c2_5170 Physcomitrium patens HOM05D009263 ORTHO05D312357 2.1e-16 91.7 491 23.4
SMO275G0042 Selaginella moellendorffii HOM05D011783 ORTHO05D017331 1.3e-13 82.4 409 24.7
Pp3c17_14540 Physcomitrium patens HOM05D009263 ORTHO05D317039 7.7e-11 73.2 214 29.4
Mapoly0621s0003 Marchantia polymorpha HOM05D023156 ORTHO05D011372 2.5e-09 68.2 321 25.9
CBR_g5640 Chara braunii HOM05D003330 ORTHO05D003805 1.8e-07 62.0 440 22.0


User provided reference genes

Program Settings