Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_19640 Physcomitrium patens HOM05D000828 ORTHO05D000623 6.7e-87 323.9 158 100.0
Pp3c11_3190 Physcomitrium patens HOM05D000828 ORTHO05D000623 1.2e-38 163.7 143 54.5
Pp3c26_14620 Physcomitrium patens HOM05D000828 ORTHO05D000623 4.9e-13 78.6 132 33.3
SMO172G0126 Selaginella moellendorffii HOM05D000828 ORTHO05D000623 4.1e-12 75.5 146 32.2
Pp3c13_11750 Physcomitrium patens HOM05D000828 ORTHO05D000623 7.1e-12 74.7 114 31.6
Pp3c3_9650 Physcomitrium patens HOM05D000828 ORTHO05D000623 1.6e-11 73.6 121 32.2
Gohir.D09G005300 Gossypium hirsutum HOM05D000828 ORTHO05D000623 3.5e-11 72.4 150 30.7
Gorai.006G006900 Gossypium raimondii HOM05D000828 ORTHO05D000623 3.5e-11 72.4 150 30.7
Gohir.A09G006200 Gossypium hirsutum HOM05D000828 ORTHO05D000623 7.8e-11 71.2 150 30.7
MBI03_g28303_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 1.7e-10 70.1 128 33.6
Aqoxy4G00302 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 1.1e-09 67.4 134 31.3
Sopen05g034800 Solanum pennellii HOM05D000828 ORTHO05D000623 1.9e-09 66.6 137 33.6
AagrBONN_evm.TU.Sc2ySwM_228.4086 Anthoceros agrestis HOM05D000828 ORTHO05D000623 3.3e-09 65.9 75 42.7
AUR62006898 Chenopodium quinoa HOM05D000828 ORTHO05D000623 4.3e-09 65.5 142 28.2
SMO147G0320 Selaginella moellendorffii HOM05D000828 ORTHO05D000623 4.3e-09 65.5 144 25.0
Solyc05g056410.1 Solanum lycopersicum HOM05D000828 ORTHO05D000623 7.3e-09 64.7 137 32.1
Ah.06g188610 Amaranthus hybridus HOM05D000828 ORTHO05D000623 2.1e-08 63.2 92 32.6
Gohir.D11G327100 Gossypium hirsutum HOM05D000828 ORTHO05D000623 2.1e-08 63.2 139 29.5
COL.COLO4_12110 Corchorus olitorius HOM05D001914 ORTHO05D000623 3.6e-08 62.4 93 38.7
HanXRQChr15g0468961 Helianthus annuus HOM05D000828 ORTHO05D000623 3.6e-08 62.4 117 31.6
DCAR_013177 Daucus carota HOM05D000828 ORTHO05D000623 4.7e-08 62.0 125 33.6
Gorai.007G358000 Gossypium raimondii HOM05D000828 ORTHO05D000623 4.7e-08 62.0 139 28.8
Nn1g04457 Nelumbo nucifera HOM05D000828 ORTHO05D000623 6.2e-08 61.6 95 38.9
Nitab4.5_0000496g0170 Nicotiana tabacum HOM05D000828 ORTHO05D000623 6.2e-08 61.6 138 32.6
PSO135G0104 Papaver somniferum HOM05D000828 ORTHO05D000623 6.2e-08 61.6 122 34.4
PSO675G4187 Papaver somniferum HOM05D000828 ORTHO05D000623 6.2e-08 61.6 121 34.7
QL10p039976 Quercus lobata HOM05D000828 ORTHO05D000623 6.2e-08 61.6 92 35.9
CiPaw.04G077600 Carya illinoinensis HOM05D000828 ORTHO05D000623 8.1e-08 61.2 140 30.7
Sc16g0009650 Simmondsia chinensis HOM05D000828 ORTHO05D000623 8.1e-08 61.2 120 29.2
PGSC0003DMG400038480 Solanum tuberosum HOM05D000828 ORTHO05D000623 8.1e-08 61.2 125 29.6
MELO3C008968.2 Cucumis melo HOM05D000828 ORTHO05D000623 1.1e-07 60.8 87 34.5
Atru.chr4.1104 Acer truncatum HOM05D000828 ORTHO05D000623 1.4e-07 60.5 123 30.9
CsaV3_4G030930 Cucumis sativus L. HOM05D000828 ORTHO05D000623 1.4e-07 60.5 87 33.3
PGSC0003DMG400023327 Solanum tuberosum HOM05D000828 ORTHO05D000623 1.4e-07 60.5 117 32.5
PSO528G0190 Papaver somniferum HOM05D000828 ORTHO05D000623 1.8e-07 60.1 81 37.0
FAN19G1830 Fragaria x ananassa HOM05D000828 ORTHO05D000623 2.3e-07 59.7 113 31.0
Gohir.A11G310700 Gossypium hirsutum HOM05D000828 ORTHO05D000623 2.3e-07 59.7 75 38.7
Hma1.2p1_0134F.1_g061590 Hydrangea macrophylla HOM05D000828 ORTHO05D000623 2.3e-07 59.7 139 30.2
TAR624G0843 Trochodendron aralioides HOM05D000828 ORTHO05D000623 2.3e-07 59.7 81 38.3
TAR628G1544 Trochodendron aralioides HOM05D000828 ORTHO05D000623 2.3e-07 59.7 79 36.7
Aqoxy1G04039 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 3.1e-07 59.3 134 27.6
CDE10G0387 Ceratophyllum demersum HOM05D000828 ORTHO05D000623 3.1e-07 59.3 140 32.1
Sopen03g002130 Solanum pennellii HOM05D000828 ORTHO05D000623 3.1e-07 59.3 125 28.0
ClCG04G001590 Citrullus lanatus HOM05D000828 ORTHO05D000623 4.0e-07 58.9 82 35.4
Migut.A00650 Erythranthe guttata HOM05D000828 ORTHO05D000623 4.0e-07 58.9 131 29.0
Oeu037850.1 Olea europaea HOM05D000828 ORTHO05D000623 4.0e-07 58.9 126 27.8
TAR625G0688 Trochodendron aralioides HOM05D000828 ORTHO05D000623 4.0e-07 58.9 126 28.6
CsaV3_6G050950 Cucumis sativus L. HOM05D000828 ORTHO05D000623 5.2e-07 58.5 120 28.3
HanXRQChr06g0183741 Helianthus annuus HOM05D000828 ORTHO05D000623 5.2e-07 58.5 113 29.2
HanXRQChr15g0476251 Helianthus annuus HOM05D000828 ORTHO05D000623 5.2e-07 58.5 113 29.2
EL10Ac4g09671 Beta vulgaris HOM05D000828 ORTHO05D000623 6.8e-07 58.2 92 33.7
CDE10G0835 Ceratophyllum demersum HOM05D000160 ORTHO05D000914 6.8e-07 58.2 96 33.3
Ciclev10002078m.g Citrus clementina HOM05D000828 ORTHO05D000623 6.8e-07 58.2 81 38.3
Prupe.4G280800 Prunus persica HOM05D000828 ORTHO05D000623 6.8e-07 58.2 94 31.9
vmacro12769 Vaccinium macrocarpon HOM05D000828 ORTHO05D000623 6.8e-07 58.2 79 39.2
EL10Ac4g09670 Beta vulgaris HOM05D000828 ORTHO05D000623 8.9e-07 57.8 119 27.7
Migut.L00272 Erythranthe guttata HOM05D000828 ORTHO05D000623 8.9e-07 57.8 81 34.6
Migut.L00581 Erythranthe guttata HOM05D000828 ORTHO05D000623 8.9e-07 57.8 81 34.6
FvH4_1g25360 Fragaria vesca HOM05D000828 ORTHO05D000623 8.9e-07 57.8 81 35.8
Nitab4.5_0010209g0020 Nicotiana tabacum HOM05D000828 ORTHO05D000623 8.9e-07 57.8 135 29.6
Peaxi162Scf00353g00023 Petunia axillaris HOM05D000828 ORTHO05D000623 8.9e-07 57.8 136 30.1
Peaxi162Scf00734g00029 Petunia axillaris HOM05D000828 ORTHO05D000623 8.9e-07 57.8 115 29.6
TWI31G1014 Tripterygium wilfordii HOM05D000828 ORTHO05D000623 8.9e-07 57.8 121 28.1
GSVIVG01022365001 Vitis vinifera HOM05D000828 ORTHO05D000623 8.9e-07 57.8 113 29.2
Aqoxy6G00246 Aquilegia oxysepala HOM05D000828 ORTHO05D000623 1.2e-06 57.4 125 31.2
FAN23G1352 Fragaria x ananassa HOM05D000828 ORTHO05D000623 1.5e-06 57.0 81 35.8
RcHm_v2.0_Chr2g0123401 Rosa chinensis HOM05D000828 ORTHO05D000623 1.5e-06 57.0 81 37.0
CDE03G0485 Ceratophyllum demersum HOM05D000044 ORTHO05D000623 2.0e-06 56.6 142 28.2
Ca_17612_v3 Cicer arietinum L. HOM05D000828 ORTHO05D000623 2.0e-06 56.6 113 28.3
Lsat_1_v5_gn_1_80561 Lactuca sativa HOM05D000828 ORTHO05D000623 2.0e-06 56.6 88 38.6
Nitab4.5_0003711g0010 Nicotiana tabacum HOM05D000828 ORTHO05D000623 2.0e-06 56.6 127 26.8
MELO3C007209.2 Cucumis melo HOM05D000828 ORTHO05D000623 2.6e-06 56.2 120 27.5
PGR102G0685 Punica granatum HOM05D000828 ORTHO05D000623 2.6e-06 56.2 81 35.8
Ah.02g117590 Amaranthus hybridus HOM05D000828 ORTHO05D000623 3.4e-06 55.8 92 33.7
CAN.G1156.37 Capsicum annuum HOM05D000828 ORTHO05D000623 3.4e-06 55.8 135 25.9
CDE02G3399 Ceratophyllum demersum HOM05D000828 ORTHO05D000623 3.4e-06 55.8 146 26.0
Eucgr.H05080 Eucalyptus grandis HOM05D000828 ORTHO05D000623 3.4e-06 55.8 135 29.6
HanXRQChr12g0380481 Helianthus annuus HOM05D000828 ORTHO05D000623 3.4e-06 55.8 81 35.8
Oeu028236.1 Olea europaea HOM05D000828 ORTHO05D000623 3.4e-06 55.8 92 33.7
Solyc03g006120.4 Solanum lycopersicum HOM05D000828 ORTHO05D000623 3.4e-06 55.8 125 26.4
Actinidia18801 Actinidia chinensis HOM05D000828 ORTHO05D000623 4.4e-06 55.5 124 33.1
Haze_25349 Corylus avellana HOM05D000828 ORTHO05D000623 4.4e-06 55.5 79 35.4
Lsat_1_v5_gn_1_80501 Lactuca sativa HOM05D000828 ORTHO05D000623 4.4e-06 55.5 84 32.1
MD15G1138000 Malus domestica HOM05D000828 ORTHO05D000623 4.4e-06 55.5 89 31.5
arahy.Tifrunner.gnm1.ann1.5PG8C6 Arachis hypogaea HOM05D000828 ORTHO05D000623 5.8e-06 55.1 94 34.0
AUR62000548 Chenopodium quinoa HOM05D000828 ORTHO05D000623 5.8e-06 55.1 79 31.6
Migut.H00833 Erythranthe guttata HOM05D000828 ORTHO05D000623 5.8e-06 55.1 86 39.5
Hma1.2p1_0215F.1_g090900 Hydrangea macrophylla HOM05D000828 ORTHO05D000623 5.8e-06 55.1 156 24.4
MBI07_g09557_MAGBIO Magnolia biondii HOM05D000828 ORTHO05D000623 5.8e-06 55.1 81 34.6
PSO675G6029 Papaver somniferum HOM05D000828 ORTHO05D000623 5.8e-06 55.1 99 36.4
CiPaw.10G060200 Carya illinoinensis HOM05D000828 ORTHO05D000623 7.6e-06 54.7 122 31.1
Cc02_g15150 Coffea canephora HOM05D000828 ORTHO05D000623 7.6e-06 54.7 128 26.6
Migut.M00720 Erythranthe guttata HOM05D000828 ORTHO05D000623 7.6e-06 54.7 87 33.3
Nitab4.5_0000462g0190 Nicotiana tabacum HOM05D000828 ORTHO05D000623 7.6e-06 54.7 122 27.9
Thecc.01G141400 Theobroma cacao HOM05D000828 ORTHO05D000623 7.6e-06 54.7 93 34.4
Oeu050101.1 Olea europaea HOM05D000828 ORTHO05D000623 9.9e-06 54.3 129 26.4
VMungo0720G2011 Vigna mungo HOM05D000382 ORTHO05D000391 9.9e-06 54.3 144 30.6


User provided reference genes

Program Settings