Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 0.0e+00 1434.1 827 100.0
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 2.9e-109 400.6 824 41.4
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 1.2e-57 229.2 811 29.0
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 1.2e-57 229.2 809 29.4
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 5.8e-57 226.9 812 28.2
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 3.2e-55 221.1 821 29.2
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 2.7e-54 218.0 813 28.3
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 3.0e-53 214.5 813 28.7
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 3.0e-53 214.5 804 28.5
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 5.1e-53 213.8 807 27.1
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 6.7e-53 213.4 806 28.0
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 1.1e-52 212.6 808 27.8
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 1.5e-52 212.2 803 26.9
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 4.3e-52 210.7 814 28.4
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 4.3e-52 210.7 815 28.3
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 4.3e-52 210.7 806 27.5
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.6e-52 210.3 809 27.8
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 1.6e-51 208.8 811 27.5
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 2.1e-51 208.4 820 28.4
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 3.7e-51 207.6 807 29.5
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 4.8e-51 207.2 806 27.8
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 4.8e-51 207.2 811 27.4
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 4.8e-51 207.2 813 28.7
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 4.8e-51 207.2 807 29.4
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 8.1e-51 206.5 811 27.1
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 1.1e-50 206.1 812 28.0
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.1e-50 206.1 806 27.5
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 1.8e-50 205.3 808 27.1
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.1e-50 204.5 809 27.4
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 5.3e-50 203.8 819 27.1
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 6.9e-50 203.4 809 27.7
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 9.0e-50 203.0 819 28.8
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 1.2e-49 202.6 805 27.0
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.6e-49 201.4 807 28.6
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 3.4e-49 201.1 813 28.3
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 1.3e-48 199.1 818 26.7
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 1.4e-47 195.7 812 26.0
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.9e-47 195.3 812 26.0
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 1.9e-47 195.3 808 26.4
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 2.4e-47 194.9 812 28.6
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 4.2e-47 194.1 808 28.0
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 7.1e-47 193.4 820 26.3
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 9.3e-47 193.0 808 26.4
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 2.1e-46 191.8 802 26.8
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.1e-46 191.8 832 26.6
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 2.7e-46 191.4 803 27.5
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 2.7e-46 191.4 807 26.0
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 4.6e-46 190.7 808 26.5
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 6.0e-46 190.3 818 26.9
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 1.0e-45 189.5 824 27.3
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.0e-45 189.5 809 26.9
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 1.3e-45 189.1 787 26.0
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.8e-45 188.7 821 26.3
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 6.7e-45 186.8 812 28.0
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 8.7e-45 186.4 791 26.8
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.5e-44 185.7 807 26.8
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 2.5e-44 184.9 817 26.8
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 3.3e-44 184.5 820 27.3
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 3.3e-44 184.5 812 28.2
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 9.6e-44 183.0 883 26.2
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 3.7e-43 181.0 815 27.2
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 3.7e-43 181.0 806 26.9
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 4.8e-43 180.6 806 26.7
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 4.8e-43 180.6 804 27.2
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 1.4e-42 179.1 829 25.3
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 3.1e-42 177.9 813 26.8
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 4.0e-42 177.6 835 26.8
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 4.0e-42 177.6 836 26.6
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.0e-42 177.6 795 28.8
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 9.0e-42 176.4 835 26.9
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.5e-41 175.6 808 26.5
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 3.4e-41 174.5 807 26.4
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 3.4e-41 174.5 800 26.8
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 5.8e-41 173.7 823 28.1
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 5.8e-41 173.7 840 25.6
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 1.3e-40 172.6 807 27.0
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 1.7e-40 172.2 801 25.3
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 1.7e-40 172.2 817 25.8
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 7.1e-39 166.8 582 28.9
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 9.3e-39 166.4 792 28.5
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 7.9e-38 163.3 756 25.5
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 3.0e-37 161.4 582 28.5
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 5.1e-37 160.6 580 27.4
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 8.7e-37 159.8 762 26.4
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.1e-36 159.5 803 25.2
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 5.7e-36 157.1 758 25.5
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 2.8e-35 154.8 584 27.2
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 2.6e-33 148.3 256 40.6
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 4.5e-33 147.5 798 24.6
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 2.2e-32 145.2 624 26.4
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 3.6e-30 137.9 821 24.6
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.1e-28 132.9 201 41.3
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 2.4e-26 125.2 184 42.4
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 4.1e-26 124.4 809 24.1
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 2.6e-25 121.7 826 22.8
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 2.6e-25 121.7 319 33.2
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.4e-25 121.3 815 23.1
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 4.5e-25 120.9 151 48.3
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.6e-22 112.5 147 48.3
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.1e-22 112.1 854 24.7
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 3.6e-22 111.3 319 32.0
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 3.9e-21 107.8 806 23.0
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 5.1e-21 107.5 891 22.8
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 5.1e-21 107.5 166 41.6
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 5.1e-21 107.5 806 23.4
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.1e-20 106.3 405 28.9
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 7.4e-20 103.6 168 39.9
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 1.3e-19 102.8 298 32.2
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 1.8e-18 99.0 298 31.5
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.5e-17 95.9 354 27.7
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 4.5e-17 94.4 301 29.2
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 5.5e-15 87.4 223 31.4
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 9.4e-15 86.7 300 31.7
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.6e-14 84.7 307 30.0
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 3.0e-13 81.6 92 47.8
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 8.8e-13 80.1 665 22.7
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.9e-09 67.4 122 38.5
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 5.9e-09 67.4 640 27.5
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.8e-08 64.7 119 38.7
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 3.8e-08 64.7 76 48.7
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.5e-07 60.8 77 46.8
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 8.0e-06 57.0 50 62.0
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 8.0e-06 57.0 175 29.7


User provided reference genes

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