Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 3.1e-78 295.8 253 100.0
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 7.8e-13 78.6 54 63.0
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 6.6e-12 75.5 53 58.5
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 8.7e-12 75.1 52 61.5
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 8.7e-12 75.1 66 51.5
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 1.5e-11 74.3 51 62.7
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.9e-11 73.9 62 53.2
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 1.9e-11 73.9 57 54.4
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 2.5e-11 73.6 51 62.7
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 2.5e-11 73.6 54 59.3
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 4.3e-11 72.8 58 55.2
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 5.6e-11 72.4 54 57.4
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 5.6e-11 72.4 51 58.8
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 7.3e-11 72.0 46 65.2
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 9.6e-11 71.6 51 58.8
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 9.6e-11 71.6 51 58.8
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 9.6e-11 71.6 51 58.8
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 9.6e-11 71.6 47 63.8
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 9.6e-11 71.6 54 53.7
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 1.2e-10 71.2 51 56.9
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 1.2e-10 71.2 66 48.5
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.2e-10 71.2 66 48.5
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.2e-10 71.2 51 58.8
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.2e-10 71.2 51 58.8
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 1.2e-10 71.2 54 57.4
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 1.6e-10 70.9 67 47.8
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 2.8e-10 70.1 51 58.8
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 2.8e-10 70.1 54 53.7
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 2.8e-10 70.1 53 56.6
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 2.8e-10 70.1 56 53.6
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 3.6e-10 69.7 66 51.5
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.6e-10 69.7 51 56.9
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 3.6e-10 69.7 52 57.7
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 3.6e-10 69.7 51 56.9
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 4.7e-10 69.3 51 56.9
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 4.7e-10 69.3 55 52.7
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 4.7e-10 69.3 51 54.9
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 4.7e-10 69.3 51 56.9
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 4.7e-10 69.3 56 53.6
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 4.7e-10 69.3 67 44.8
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 6.2e-10 68.9 51 56.9
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 6.2e-10 68.9 55 54.5
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 8.1e-10 68.6 56 50.0
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 8.1e-10 68.6 51 54.9
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 8.1e-10 68.6 51 58.8
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 8.1e-10 68.6 51 54.9
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 8.1e-10 68.6 51 54.9
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 8.1e-10 68.6 51 54.9
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 8.1e-10 68.6 51 54.9
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 1.1e-09 68.2 58 53.4
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 1.1e-09 68.2 54 51.9
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 1.1e-09 68.2 51 56.9
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 1.1e-09 68.2 54 51.9
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 1.1e-09 68.2 51 54.9
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 1.4e-09 67.8 51 54.9
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 1.4e-09 67.8 51 54.9
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 1.4e-09 67.8 51 54.9
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.4e-09 67.8 51 52.9
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 1.4e-09 67.8 54 53.7
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 1.4e-09 67.8 62 51.6
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 1.4e-09 67.8 51 54.9
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 1.4e-09 67.8 65 49.2
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 1.4e-09 67.8 52 55.8
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 1.8e-09 67.4 61 52.5
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 1.8e-09 67.4 64 50.0
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 1.8e-09 67.4 51 58.8
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 1.8e-09 67.4 67 44.8
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 1.8e-09 67.4 51 58.8
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 2.4e-09 67.0 51 56.9
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 2.4e-09 67.0 53 52.8
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 2.4e-09 67.0 52 57.7
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 3.1e-09 66.6 54 51.9
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.1e-09 66.6 51 54.9
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 4.0e-09 66.2 51 56.9
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 4.0e-09 66.2 51 52.9
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 5.2e-09 65.9 67 41.8
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 5.2e-09 65.9 51 54.9
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 6.9e-09 65.5 51 54.9
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 6.9e-09 65.5 61 45.9
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 6.9e-09 65.5 54 50.0
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 6.9e-09 65.5 51 52.9
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 6.9e-09 65.5 51 52.9
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 9.0e-09 65.1 54 51.9
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.2e-08 64.7 51 52.9
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 1.5e-08 64.3 51 52.9
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 1.5e-08 64.3 51 52.9
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.5e-08 64.3 51 51.0
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 1.5e-08 64.3 51 56.9
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 2.0e-08 63.9 51 54.9
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 2.0e-08 63.9 51 52.9
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 2.0e-08 63.9 56 55.4
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 2.0e-08 63.9 51 52.9
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 2.6e-08 63.5 51 52.9
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 3.4e-08 63.2 51 52.9
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 3.4e-08 63.2 60 51.7
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 4.4e-08 62.8 51 51.0
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 9.9e-08 61.6 63 46.0
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 1.7e-07 60.8 62 46.8
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 2.9e-07 60.1 47 55.3
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 8.4e-07 58.5 71 40.8
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.4e-06 57.0 51 45.1


User provided reference genes

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