Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 1.4e-54 216.1 111 100.0
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 9.3e-27 123.6 121 57.9
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 8.2e-23 110.5 93 54.8
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 1.1e-22 110.2 104 50.0
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 1.8e-22 109.4 85 60.0
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 2.4e-22 109.0 82 59.8
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 4.0e-22 108.2 97 54.6
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 9.0e-22 107.1 102 49.0
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 9.0e-22 107.1 100 49.0
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 9.0e-22 107.1 100 49.0
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 1.2e-21 106.7 88 55.7
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 1.2e-21 106.7 105 48.6
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 1.2e-21 106.7 85 56.5
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 1.5e-21 106.3 85 55.3
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 1.5e-21 106.3 85 55.3
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 1.5e-21 106.3 85 55.3
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.5e-21 106.3 85 57.6
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 2.0e-21 105.9 85 58.8
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 2.0e-21 105.9 88 54.5
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 2.0e-21 105.9 88 58.0
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 3.4e-21 105.1 85 56.5
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 3.4e-21 105.1 96 55.2
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 4.5e-21 104.8 106 48.1
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 4.5e-21 104.8 85 57.6
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 5.8e-21 104.4 85 55.3
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 7.6e-21 104.0 83 59.0
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 1.0e-20 103.6 97 48.5
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.0e-20 103.6 85 56.5
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.0e-20 103.6 85 56.5
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 1.0e-20 103.6 85 56.5
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 1.0e-20 103.6 108 46.3
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 1.3e-20 103.2 88 53.4
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 1.3e-20 103.2 81 60.5
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 1.7e-20 102.8 82 56.1
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 1.7e-20 102.8 85 55.3
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 1.7e-20 102.8 104 49.0
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 2.2e-20 102.4 92 48.9
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 2.2e-20 102.4 102 46.1
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 2.9e-20 102.1 100 50.0
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 3.8e-20 101.7 100 47.0
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 3.8e-20 101.7 85 52.9
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 3.8e-20 101.7 88 54.5
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 3.8e-20 101.7 92 52.2
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 4.9e-20 101.3 82 57.3
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 4.9e-20 101.3 85 54.1
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 4.9e-20 101.3 88 53.4
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 4.9e-20 101.3 88 54.5
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 6.5e-20 100.9 106 45.3
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 6.5e-20 100.9 88 54.5
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 8.4e-20 100.5 85 54.1
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 8.4e-20 100.5 104 49.0
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.1e-19 100.1 85 56.5
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 1.4e-19 99.8 85 55.3
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 1.9e-19 99.4 106 42.5
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 1.9e-19 99.4 85 51.8
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 2.5e-19 99.0 92 51.1
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 2.5e-19 99.0 95 51.6
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 2.5e-19 99.0 95 51.6
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 2.5e-19 99.0 85 52.9
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 2.5e-19 99.0 85 52.9
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 3.2e-19 98.6 85 51.8
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 3.2e-19 98.6 85 54.1
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 3.2e-19 98.6 105 44.8
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 3.2e-19 98.6 88 51.1
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 5.5e-19 97.8 110 43.6
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 7.1e-19 97.4 87 51.7
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 7.1e-19 97.4 88 51.1
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 7.1e-19 97.4 81 55.6
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 7.1e-19 97.4 81 54.3
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 7.1e-19 97.4 85 50.6
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 9.3e-19 97.1 85 51.8
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 9.3e-19 97.1 82 52.4
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 1.2e-18 96.7 89 51.7
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.2e-18 96.7 86 51.2
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 1.6e-18 96.3 82 52.4
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 1.6e-18 96.3 82 52.4
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 1.6e-18 96.3 81 54.3
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 2.1e-18 95.9 81 53.1
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 2.1e-18 95.9 81 53.1
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 2.1e-18 95.9 81 53.1
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 2.7e-18 95.5 109 41.3
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 3.5e-18 95.1 81 53.1
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 4.6e-18 94.7 85 52.9
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 4.6e-18 94.7 85 52.9
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.6e-18 94.7 85 52.9
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 4.6e-18 94.7 85 52.9
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.6e-18 94.7 85 52.9
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.6e-18 94.7 85 52.9
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 1.0e-17 93.6 89 48.3
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 1.8e-17 92.8 82 48.8
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 6.7e-17 90.9 89 48.3
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 8.7e-17 90.5 82 51.2
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.1e-16 90.1 80 52.5
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 1.5e-16 89.7 89 47.2
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 1.9e-16 89.4 89 46.1
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 7.4e-16 87.4 91 45.1
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 1.3e-15 86.7 82 47.6
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 2.2e-15 85.9 61 63.9
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 2.8e-15 85.5 92 45.7
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 6.3e-15 84.3 76 55.3
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 4.1e-14 81.6 88 47.7
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 7.6e-13 77.4 126 34.9
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 2.5e-11 72.4 80 43.8
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 3.2e-11 72.0 85 40.0
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 3.2e-11 72.0 84 42.9
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 7.2e-11 70.9 88 46.6
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 1.8e-09 66.2 65 49.2
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 3.9e-09 65.1 79 40.5
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 5.1e-09 64.7 79 38.0
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 5.1e-09 64.7 80 38.8
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 5.1e-09 64.7 80 38.8
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 9.7e-08 60.5 58 44.8
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.1e-06 55.5 74 43.2
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 4.1e-06 55.1 51 47.1
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 5.3e-06 54.7 70 44.3
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 9.1e-06 53.9 78 39.7


User provided reference genes

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