Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.4e-246 855.1 462 100.0
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 2.4e-246 855.1 462 100.0
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 7.5e-46 189.1 446 36.8
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 8.6e-42 175.6 294 42.2
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 3.6e-32 143.7 172 47.7
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 7.8e-27 125.9 217 36.4
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 1.7e-26 124.8 206 37.9
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 2.3e-26 124.4 182 41.8
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 3.0e-26 124.0 458 29.7
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 1.5e-25 121.7 200 39.0
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 1.9e-25 121.3 218 39.0
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 4.3e-25 120.2 204 38.2
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 5.6e-25 119.8 209 37.8
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 5.6e-25 119.8 184 40.2
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 5.6e-25 119.8 198 39.4
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 5.6e-25 119.8 213 35.7
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 7.3e-25 119.4 222 36.0
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 7.3e-25 119.4 212 39.2
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 7.3e-25 119.4 207 37.7
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 7.3e-25 119.4 200 38.5
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 7.3e-25 119.4 182 41.2
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 9.5e-25 119.0 235 36.2
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 1.1e-23 115.5 220 35.5
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 1.1e-23 115.5 213 38.0
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 3.1e-23 114.0 200 39.0
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 5.2e-23 113.2 207 35.3
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 6.8e-23 112.8 267 31.8
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 6.8e-23 112.8 174 37.4
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 6.8e-23 112.8 179 40.2
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 6.8e-23 112.8 273 33.0
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 1.2e-22 112.1 230 35.2
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 1.5e-22 111.7 241 32.0
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 1.5e-22 111.7 198 35.4
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 2.0e-22 111.3 210 35.2
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 2.6e-22 110.9 222 32.4
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 3.4e-22 110.5 178 39.3
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 4.4e-22 110.2 174 40.2
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 5.8e-22 109.8 177 35.6
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 7.6e-22 109.4 185 36.8
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 9.9e-22 109.0 176 38.1
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 2.2e-21 107.8 221 33.5
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 2.9e-21 107.5 219 34.7
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 3.8e-21 107.1 225 34.2
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 1.1e-20 105.5 231 31.2
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 1.4e-20 105.1 204 36.8
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 1.4e-20 105.1 264 31.4
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 2.4e-20 104.4 272 30.1
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 2.4e-20 104.4 178 34.8
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 1.2e-19 102.1 184 34.2
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 1.2e-19 102.1 268 32.5
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 1.6e-19 101.7 279 31.9
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 2.1e-19 101.3 230 33.5
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 2.7e-19 100.9 208 34.6
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 7.8e-19 99.4 208 32.7
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 1.3e-18 98.6 131 44.3
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 2.3e-18 97.8 178 36.0
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 1.5e-17 95.1 209 34.0
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 2.5e-17 94.4 170 33.5
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 3.3e-17 94.0 264 30.3
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 7.3e-17 92.8 216 33.3
Pp3c16_23250 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.6e-16 91.7 325 31.4
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 1.1e-15 89.0 356 28.9
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 1.2e-14 85.5 205 30.7
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 7.6e-14 82.8 141 36.2
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 1.7e-13 81.6 267 28.1
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 5.6e-09 66.6 338 26.0
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 9.9e-06 55.8 41 56.1


User provided reference genes

Program Settings