Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_5260 Physcomitrium patens HOM05D011764 ORTHO05D017075 1.1e-128 463.4 241 100.0
Pp3c25_11290 Physcomitrium patens HOM05D011764 ORTHO05D017075 2.5e-37 159.8 334 35.9
Pp3c3_17970 Physcomitrium patens HOM05D015359 ORTHO05D017075 8.0e-15 85.1 114 42.1
Pp3c3_6760 Physcomitrium patens HOM05D014505 ORTHO05D026046 1.2e-13 81.3 161 31.7
Pp3c25_11400 Physcomitrium patens HOM05D015359 ORTHO05D017075 1.5e-13 80.9 155 34.8
Pp3c5_25070 Physcomitrium patens HOM05D015359 ORTHO05D017075 3.3e-13 79.7 87 46.0
Pp3c6_3870 Physcomitrium patens HOM05D015359 ORTHO05D017075 4.4e-13 79.3 87 46.0
Pp3c22_16710 Physcomitrium patens HOM05D011764 ORTHO05D308383 2.4e-11 73.6 82 46.3
Pp3c18_14890 Physcomitrium patens HOM05D000262 ORTHO05D316388 4.1e-11 72.8 77 45.5
Pp3c21_15220 Physcomitrium patens HOM05D000262 ORTHO05D316196 7.0e-11 72.0 77 44.2
Pp3c25_11210 Physcomitrium patens HOM05D011764 ORTHO05D026047 7.0e-11 72.0 178 32.6
Pp3c25_11340 Physcomitrium patens HOM05D014505 ORTHO05D030131 7.0e-11 72.0 123 35.0
Pp3c5_25180 Physcomitrium patens HOM05D011764 ORTHO05D026047 9.1e-11 71.6 103 37.9
Pp3c13_3350 Physcomitrium patens HOM05D014505 ORTHO05D026046 1.2e-10 71.2 161 27.3
Pp3c24_5200 Physcomitrium patens HOM05D011764 ORTHO05D318183 1.2e-10 71.2 69 42.0
Pp3c25_11360 Physcomitrium patens HOM05D014505 ORTHO05D030131 1.6e-10 70.9 106 33.0
Pp3c16_19790 Physcomitrium patens HOM05D014505 ORTHO05D000300 2.0e-10 70.5 102 32.4
Pp3c18_2310 Physcomitrium patens HOM05D014505 ORTHO05D013334 2.0e-10 70.5 173 30.6
Pp3c20_18320 Physcomitrium patens HOM05D011764 ORTHO05D308574 2.0e-10 70.5 63 47.6
Pp3c6_1990 Physcomitrium patens HOM05D016040 ORTHO05D005718 4.5e-10 69.3 121 33.1
Pp3c11_9210 Physcomitrium patens HOM05D011764 ORTHO05D026047 1.7e-09 67.4 114 31.6
Pp3c6_12850 Physcomitrium patens HOM05D015359 ORTHO05D050340 2.2e-09 67.0 60 46.7
Pp3c6_5150 Physcomitrium patens HOM05D011764 ORTHO05D026047 2.9e-09 66.6 114 31.6
Pp3c19_4360 Physcomitrium patens HOM05D020085 ORTHO05D000300 3.8e-09 66.2 68 42.6
Pp3c14_22910 Physcomitrium patens HOM05D011764 ORTHO05D316852 6.5e-09 65.5 75 42.7
Pp3c6_4360 Physcomitrium patens HOM05D016040 ORTHO05D005718 6.5e-09 65.5 104 32.7
Pp3c15_10550 Physcomitrium patens HOM05D011764 ORTHO05D318157 8.5e-09 65.1 75 42.7
Pp3c21_6960 Physcomitrium patens HOM05D020085 ORTHO05D311222 1.1e-08 64.7 66 40.9
Pp3c25_14480 Physcomitrium patens HOM05D016040 ORTHO05D005718 1.5e-08 64.3 103 34.0
Zm00001eb001530 Zea mays HOM05D000262 ORTHO05D005718 5.5e-08 62.4 73 43.8
Pp3c9_9100 Physcomitrium patens HOM05D011764 ORTHO05D310360 9.4e-08 61.6 75 40.0
Pp3c19_20160 Physcomitrium patens HOM05D016040 ORTHO05D317457 1.2e-07 61.2 70 40.0
Mapoly0180s0012 Marchantia polymorpha HOM05D010122 ORTHO05D013334 1.6e-07 60.8 121 32.2
Pp3c19_4310 Physcomitrium patens HOM05D000262 ORTHO05D000300 2.1e-07 60.5 66 42.4
Pp3c19_4313 Physcomitrium patens HOM05D000262 ORTHO05D000300 2.1e-07 60.5 66 42.4
Pp3c5_14790 Physcomitrium patens HOM05D014505 ORTHO05D050340 2.1e-07 60.5 158 27.8
Mapoly0023s0034 Marchantia polymorpha HOM05D000262 ORTHO05D000399 3.6e-07 59.7 72 38.9
Pp3c27_8170 Physcomitrium patens HOM05D049237 ORTHO05D314981 4.7e-07 59.3 82 41.5
Os03g0120400 Oryza sativa ssp. japonica HOM05D000262 ORTHO05D005718 8.0e-07 58.5 72 40.3
Nn3g18768 Nelumbo nucifera HOM05D000262 ORTHO05D005718 1.4e-06 57.8 94 34.0
Pp3c3_6890 Physcomitrium patens HOM05D014505 ORTHO05D026046 1.4e-06 57.8 185 27.0
Mapoly0180s0015 Marchantia polymorpha HOM05D010122 ORTHO05D013334 1.8e-06 57.4 66 39.4
Mapoly0180s0017 Marchantia polymorpha HOM05D010122 ORTHO05D013334 1.8e-06 57.4 66 39.4
CDE02G3827 Ceratophyllum demersum HOM05D000262 ORTHO05D005718 3.0e-06 56.6 81 38.3
AUR62007086 Chenopodium quinoa HOM05D000262 ORTHO05D005718 3.0e-06 56.6 78 38.5
AUR62019949 Chenopodium quinoa HOM05D000262 ORTHO05D005718 3.0e-06 56.6 78 38.5
Mapoly0180s0014 Marchantia polymorpha HOM05D010122 ORTHO05D013334 3.0e-06 56.6 66 37.9
Mapoly0180s0018 Marchantia polymorpha HOM05D010122 ORTHO05D013334 3.0e-06 56.6 66 37.9
Mapoly0180s0021 Marchantia polymorpha HOM05D010122 ORTHO05D013334 3.0e-06 56.6 66 37.9
MSTRG.13691 Avicennia marina HOM05D000262 ORTHO05D005718 6.8e-06 55.5 71 36.6
EL10Ac5g12392 Beta vulgaris HOM05D000262 ORTHO05D005718 6.8e-06 55.5 78 35.9
CANSAT78G1328 Cannabis sativa HOM05D000262 ORTHO05D000300 6.8e-06 55.5 87 29.9
Pp3c16_23930 Physcomitrium patens HOM05D015359 ORTHO05D017075 6.8e-06 55.5 108 34.3
HanXRQChr12g0375901 Helianthus annuus HOM05D000262 ORTHO05D000300 8.8e-06 55.1 87 29.9
MD13G1026800 Malus domestica HOM05D000262 ORTHO05D000300 8.8e-06 55.1 80 33.8
Oeu022024.1 Olea europaea HOM05D000262 ORTHO05D005718 8.8e-06 55.1 69 37.7
Pp3c22_7540 Physcomitrium patens HOM05D010122 ORTHO05D000300 8.8e-06 55.1 69 37.7
Pp3c6_3830 Physcomitrium patens HOM05D011764 ORTHO05D030131 8.8e-06 55.1 76 32.9


User provided reference genes

Program Settings