Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 8.3e-241 836.6 428 100.0
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 1.3e-145 520.4 351 70.9
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 7.2e-136 488.0 324 71.9
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 1.2e-135 487.3 335 68.7
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 1.6e-135 486.9 354 67.2
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 1.6e-135 486.9 322 72.0
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 2.1e-135 486.5 350 68.0
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 1.0e-134 484.2 326 69.6
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 3.0e-134 482.6 350 66.6
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 4.0e-134 482.3 320 71.6
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.2e-133 480.7 349 68.8
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.6e-133 479.6 340 68.8
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.6e-133 479.6 339 67.8
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.4e-133 479.2 319 70.8
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 3.4e-133 479.2 349 68.2
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 7.5e-133 478.0 350 68.0
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 1.3e-132 477.2 354 66.7
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.2e-132 476.5 349 65.6
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 3.7e-132 475.7 319 70.5
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 4.9e-132 475.3 319 70.5
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 6.3e-132 474.9 319 69.6
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 3.1e-131 472.6 335 67.2
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 4.1e-131 472.2 326 67.2
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 9.2e-131 471.1 317 70.0
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 9.2e-131 471.1 318 68.9
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.2e-130 470.7 320 69.1
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 1.6e-130 470.3 343 65.6
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 1.6e-130 470.3 337 67.4
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 2.0e-130 469.9 319 69.9
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 2.7e-130 469.5 337 67.4
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 3.5e-130 469.2 354 65.0
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 4.5e-130 468.8 332 67.5
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 5.9e-130 468.4 345 66.7
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 5.9e-130 468.4 319 68.7
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 7.8e-130 468.0 321 70.1
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 7.8e-130 468.0 349 65.0
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.0e-129 467.6 339 66.7
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 1.0e-129 467.6 345 67.0
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 1.3e-129 467.2 349 65.3
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 2.3e-129 466.5 347 64.8
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 2.9e-129 466.1 320 69.7
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 2.9e-129 466.1 319 68.7
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 2.9e-129 466.1 349 64.5
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 3.9e-129 465.7 319 68.7
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 5.0e-129 465.3 355 65.4
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 6.6e-129 464.9 320 70.3
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 6.6e-129 464.9 339 65.8
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 8.6e-129 464.5 341 66.9
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 8.6e-129 464.5 349 65.6
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 8.6e-129 464.5 320 68.8
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 1.1e-128 464.2 347 65.1
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.1e-128 464.2 319 68.3
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.9e-128 463.4 326 67.5
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.9e-128 463.4 334 67.1
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 1.2e-127 460.7 343 64.4
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 1.2e-127 460.7 345 63.8
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 1.6e-127 460.3 340 64.1
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 1.6e-127 460.3 307 71.7
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 2.1e-127 459.9 321 66.7
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 2.1e-127 459.9 340 65.3
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 2.1e-127 459.9 356 63.8
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 2.1e-127 459.9 349 65.3
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 2.8e-127 459.5 340 64.7
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 2.8e-127 459.5 340 64.7
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 2.8e-127 459.5 348 63.2
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 4.7e-127 458.8 332 67.2
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 1.0e-126 457.6 340 64.1
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.4e-126 457.2 340 64.4
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.4e-126 457.2 341 65.4
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 2.3e-126 456.4 305 70.8
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 6.8e-126 454.9 340 63.8
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 1.5e-125 453.8 340 64.1
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 1.5e-125 453.8 340 63.8
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 2.0e-125 453.4 347 63.4
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.4e-125 452.6 309 70.9
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 4.4e-125 452.2 340 63.8
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 6.4e-124 448.4 341 63.9
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 7.0e-123 444.9 357 61.9
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 9.2e-123 444.5 306 68.6
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 3.5e-122 442.6 317 67.5
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 6.0e-122 441.8 346 62.1
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 6.6e-121 438.3 344 63.4
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 6.6e-121 438.3 333 62.8
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.1e-118 431.0 347 61.1
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 2.3e-118 429.9 349 64.8
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.0e-113 414.5 319 63.6
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.3e-110 403.3 264 73.1
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 6.6e-105 385.2 319 60.8
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 1.2e-103 380.9 254 72.8
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 9.9e-101 371.3 387 54.0
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 1.5e-93 347.4 347 53.3
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 9.9e-93 344.7 230 71.3
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.2e-91 339.7 319 54.5
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 4.2e-91 339.3 317 54.3
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 3.5e-90 336.3 251 66.9
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 4.6e-90 335.9 223 72.2
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 1.1e-88 331.3 500 40.8
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.6e-82 310.8 257 60.7
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 2.9e-76 290.0 189 71.4
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 1.6e-71 274.2 221 59.7
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 2.1e-71 273.9 342 47.7
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.3e-68 264.6 456 37.9
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.5e-66 256.5 162 71.0
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 1.8e-62 244.2 320 45.0
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.1e-59 235.0 178 63.5
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.7e-56 222.6 141 75.9
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 1.1e-51 208.4 373 37.5
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 1.4e-49 201.4 346 36.7
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 9.7e-48 195.3 127 74.0
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 2.4e-46 190.7 131 69.5
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.1e-42 177.6 100 80.0
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.2e-32 145.2 97 69.1
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 3.4e-32 143.7 84 79.8
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 3.5e-29 133.7 88 71.6
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.2e-21 108.6 59 79.7
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 5.7e-16 89.7 76 55.3
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.0e-12 79.0 56 67.9
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 4.0e-09 67.0 44 65.9
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 1.7e-07 61.6 62 46.8
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 9.2e-06 55.8 30 80.0


User provided reference genes

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