Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 6.2e-82 307.4 151 100.0
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 2.5e-67 258.8 151 84.8
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 3.3e-35 152.1 145 55.9
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 5.7e-27 124.8 145 46.9
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 2.8e-26 122.5 147 49.0
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 4.8e-26 121.7 148 49.3
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 1.4e-25 120.2 137 48.9
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 1.4e-25 120.2 137 48.9
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 1.8e-25 119.8 146 47.3
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 1.8e-25 119.8 147 47.6
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 3.1e-25 119.0 138 46.4
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 6.9e-25 117.9 132 48.5
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 9.1e-25 117.5 147 43.5
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 9.1e-25 117.5 145 44.8
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 1.2e-24 117.1 147 47.6
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 1.2e-24 117.1 145 46.2
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 1.5e-24 116.7 145 44.8
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 1.5e-24 116.7 138 45.7
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 2.0e-24 116.3 145 44.1
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 2.6e-24 115.9 137 45.3
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 2.6e-24 115.9 142 45.8
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 3.4e-24 115.5 147 49.7
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 3.4e-24 115.5 137 46.0
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 3.4e-24 115.5 149 49.0
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 3.4e-24 115.5 149 49.0
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 3.4e-24 115.5 147 44.9
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 3.4e-24 115.5 145 46.2
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 3.4e-24 115.5 137 47.4
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 4.5e-24 115.2 145 45.5
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 5.9e-24 114.8 137 46.7
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 5.9e-24 114.8 133 48.1
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 5.9e-24 114.8 136 47.8
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 5.9e-24 114.8 149 45.0
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 5.9e-24 114.8 132 48.5
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 5.9e-24 114.8 146 45.2
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 7.7e-24 114.4 145 45.5
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 1.0e-23 114.0 145 44.8
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 1.0e-23 114.0 151 43.0
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 1.0e-23 114.0 147 44.9
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 1.7e-23 113.2 146 45.2
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 2.9e-23 112.5 143 44.8
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 3.8e-23 112.1 149 45.6
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 5.0e-23 111.7 148 46.6
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 6.5e-23 111.3 138 46.4
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 6.5e-23 111.3 137 44.5
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 6.5e-23 111.3 136 47.1
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 8.5e-23 110.9 132 47.0
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 8.5e-23 110.9 145 44.1
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 8.5e-23 110.9 137 46.7
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 1.4e-22 110.2 137 45.3
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 1.4e-22 110.2 145 43.4
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 1.4e-22 110.2 149 46.3
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 1.9e-22 109.8 143 43.4
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.9e-22 109.8 143 43.4
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.9e-22 109.8 143 43.4
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 1.9e-22 109.8 146 43.2
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 1.9e-22 109.8 138 46.4
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 2.5e-22 109.4 146 44.5
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 2.5e-22 109.4 132 47.0
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 2.5e-22 109.4 150 45.3
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 2.5e-22 109.4 139 46.0
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 3.2e-22 109.0 148 43.9
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 3.2e-22 109.0 135 45.9
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 3.2e-22 109.0 145 44.1
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 4.2e-22 108.6 133 45.1
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 4.2e-22 108.6 134 44.8
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 5.5e-22 108.2 133 46.6
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 5.5e-22 108.2 132 43.9
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 5.5e-22 108.2 137 43.8
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 7.2e-22 107.8 134 43.3
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 7.2e-22 107.8 137 46.0
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 9.4e-22 107.5 145 46.2
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 9.4e-22 107.5 132 47.7
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 1.2e-21 107.1 132 46.2
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 1.2e-21 107.1 132 46.2
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 1.2e-21 107.1 130 46.9
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 1.2e-21 107.1 134 47.0
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 1.6e-21 106.7 147 43.5
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 1.6e-21 106.7 139 43.9
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 1.6e-21 106.7 157 41.4
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 1.6e-21 106.7 146 41.8
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 2.1e-21 106.3 151 44.4
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 2.1e-21 106.3 134 46.3
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 2.1e-21 106.3 132 48.5
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 2.7e-21 105.9 161 44.7
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 2.7e-21 105.9 152 44.1
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 3.6e-21 105.5 132 45.5
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 4.7e-21 105.1 150 44.0
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 6.1e-21 104.8 134 41.8
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 7.9e-21 104.4 136 44.1
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 7.9e-21 104.4 136 43.4
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 1.0e-20 104.0 136 44.9
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 1.8e-20 103.2 132 43.2
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 2.3e-20 102.8 134 45.5
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 2.3e-20 102.8 143 42.0
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 2.3e-20 102.8 132 43.9
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 3.0e-20 102.4 132 43.9
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 3.9e-20 102.1 129 45.0
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 5.2e-20 101.7 146 41.1
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 6.7e-20 101.3 136 43.4
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 8.8e-20 100.9 127 44.9
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 1.1e-19 100.5 132 45.5
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 2.6e-19 99.4 137 41.6
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 2.6e-19 99.4 159 42.1
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 4.4e-19 98.6 135 44.4
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 5.7e-19 98.2 133 45.9
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 5.7e-19 98.2 139 42.4
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 1.3e-18 97.1 130 42.3
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 2.2e-18 96.3 130 45.4
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 3.7e-18 95.5 131 40.5
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 6.3e-18 94.7 127 43.3
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 6.3e-18 94.7 135 39.3
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 3.1e-17 92.4 131 39.7
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 3.1e-17 92.4 131 41.2
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 5.3e-17 91.7 149 37.6
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 1.2e-16 90.5 86 53.5
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 2.0e-16 89.7 128 39.8
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 3.5e-16 89.0 128 41.4
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 5.9e-16 88.2 87 54.0
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 1.5e-14 83.6 87 49.4
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 2.6e-11 72.8 68 50.0
AagrBONN_evm.TU.Sc2ySwM_340.252 Anthoceros agrestis HOM05D005924 ORTHO05D007290 3.3e-11 72.4 108 46.3
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 1.3e-10 70.5 101 44.6
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 3.1e-09 65.9 105 41.9
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 5.3e-09 65.1 133 39.1
AagrBONN_evm.TU.Sc2ySwM_340.382 Anthoceros agrestis HOM05D005924 ORTHO05D007290 2.0e-08 63.2 152 32.2
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 1.7e-07 60.1 100 43.0
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 2.2e-07 59.7 101 36.6
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 2.5e-06 56.2 100 40.0
CBR_g27765 Chara braunii HOM05D005924 ORTHO05D007290 3.2e-06 55.8 136 34.6


User provided reference genes

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