Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_29630 Physcomitrium patens HOM05D006540 ORTHO05D008202 7.1e-60 233.8 124 100.0
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 2.2e-13 79.3 100 49.0
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 1.1e-12 77.0 67 61.2
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 2.8e-08 62.4 112 36.6
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 8.3e-08 60.8 97 38.1
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 1.8e-07 59.7 66 48.5
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 2.4e-07 59.3 92 38.0
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 2.4e-07 59.3 92 37.0
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 3.1e-07 58.9 88 39.8
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 3.1e-07 58.9 66 43.9
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 7.0e-07 57.8 97 38.1
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 7.0e-07 57.8 88 38.6
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 7.0e-07 57.8 88 38.6
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 9.2e-07 57.4 92 35.9
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 9.2e-07 57.4 64 45.3
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 1.2e-06 57.0 105 35.2
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 1.6e-06 56.6 97 35.1
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 2.7e-06 55.8 70 42.9
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 2.7e-06 55.8 70 42.9
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 2.7e-06 55.8 101 35.6
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 3.5e-06 55.5 97 37.1
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 3.5e-06 55.5 101 34.7
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 3.5e-06 55.5 97 38.1
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 3.5e-06 55.5 111 36.0
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 4.5e-06 55.1 72 38.9
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 4.5e-06 55.1 66 40.9
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 4.5e-06 55.1 80 37.5
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 4.5e-06 55.1 57 47.4
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 5.9e-06 54.7 82 36.6
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 7.7e-06 54.3 85 36.5
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 7.7e-06 54.3 71 40.8


User provided reference genes

Program Settings