Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_28680 Physcomitrium patens HOM05D031018 ORTHO05D050351 0.0e+00 1195.6 801 100.0
Pp3c6_28690 Physcomitrium patens HOM05D031018 ORTHO05D050351 0.0e+00 1172.1 812 97.7
Mapoly0003s0084 Marchantia polymorpha HOM05D031018 ORTHO05D001999 2.3e-10 72.0 303 28.7
Thhalv10021132m.g Eutrema salsugineum HOM05D001169 ORTHO05D001002 1.2e-09 69.7 152 32.2
CARHR086720 Cardamine hirsuta HOM05D001169 ORTHO05D001002 4.4e-09 67.8 146 32.2
Sp3g10380 Schrenkiella parvula HOM05D001169 ORTHO05D001002 4.8e-08 64.3 138 32.6
BraA05t22516Z Brassica rapa HOM05D001169 ORTHO05D001002 1.8e-07 62.4 145 31.0
BolC5t34232H Brassica oleracea HOM05D001169 ORTHO05D001002 2.4e-07 62.0 128 32.0
C05p55630 Brassica napus HOM05D001169 ORTHO05D001002 3.1e-07 61.6 145 30.3
A05p37190 Brassica napus HOM05D001169 ORTHO05D001002 4.1e-07 61.2 145 31.0
Sc21g0000240 Simmondsia chinensis HOM05D001169 ORTHO05D001002 5.3e-07 60.8 132 31.8
Aa31LG3G6350 Aethionema arabicum HOM05D001169 ORTHO05D001002 7.0e-07 60.5 88 37.5
Aa31LG5G11480 Aethionema arabicum HOM05D001042 ORTHO05D002657 7.0e-07 60.5 129 33.3
C01p53140 Brassica napus HOM05D001169 ORTHO05D001002 9.1e-07 60.1 144 31.2
Duzib168G0957 Durio zibethinus HOM05D000033 ORTHO05D004067 9.1e-07 60.1 152 28.3
Aa31LG11G7730 Aethionema arabicum HOM05D001169 ORTHO05D001002 1.2e-06 59.7 145 32.4
BcaB04g21093 Brassica carinata HOM05D001169 ORTHO05D001002 1.6e-06 59.3 140 31.4
Eucgr.A02433 Eucalyptus grandis HOM05D001169 ORTHO05D001002 1.6e-06 59.3 128 29.7
Gohir.A10G028200 Gossypium hirsutum HOM05D000029 ORTHO05D001395 1.6e-06 59.3 135 33.3
Gohir.D10G028600 Gossypium hirsutum HOM05D000029 ORTHO05D001395 1.6e-06 59.3 135 33.3
Gorai.011G030400 Gossypium raimondii HOM05D000029 ORTHO05D001395 1.6e-06 59.3 135 33.3
Carub.0003s1150 Capsella rubella HOM05D001169 ORTHO05D001002 2.7e-06 58.5 74 43.2
Zm00001eb184760 Zea mays HOM05D000021 ORTHO05D000010 3.5e-06 58.2 132 31.8
AL3G23810 Arabidopsis lyrata HOM05D001169 ORTHO05D001002 4.5e-06 57.8 74 43.2
CARHR206280 Cardamine hirsuta HOM05D001169 ORTHO05D001002 4.5e-06 57.8 125 31.2
THA.LOC104809922 Tarenaya hassleriana HOM05D001169 ORTHO05D001002 4.5e-06 57.8 146 32.2
arahy.Tifrunner.gnm1.ann1.0WT4Y2 Arachis hypogaea HOM05D001169 ORTHO05D001002 5.9e-06 57.4 157 30.6
CSS0025407 Camellia sinensis var. sinensis HOM05D001169 ORTHO05D001002 5.9e-06 57.4 68 41.2
CARHR206290 Cardamine hirsuta HOM05D001169 ORTHO05D001002 5.9e-06 57.4 73 39.7
Duzib147G0665 Durio zibethinus HOM05D000168 ORTHO05D001942 5.9e-06 57.4 90 38.9
Aqoxy6G00089 Aquilegia oxysepala HOM05D000029 ORTHO05D006810 7.7e-06 57.0 137 32.1
CSS0025282 Camellia sinensis var. sinensis HOM05D001169 ORTHO05D001002 7.7e-06 57.0 68 41.2
Ciclev10032086m.g Citrus clementina HOM05D001169 ORTHO05D001002 7.7e-06 57.0 120 33.3
Hund19182 Selenicereus undatus HOM05D001169 ORTHO05D001002 7.7e-06 57.0 120 30.0
Zm00001eb020600 Zea mays HOM05D001169 ORTHO05D001002 7.7e-06 57.0 156 31.4


User provided reference genes

Program Settings