Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_26630 Physcomitrium patens HOM05D016606 ORTHO05D018318 3.7e-117 424.9 213 100.0
Pp3c13_12040 Physcomitrium patens HOM05D016606 ORTHO05D018318 1.0e-66 257.3 194 63.4
Mapoly0013s0125 Marchantia polymorpha HOM05D016606 ORTHO05D018318 2.6e-62 242.7 207 58.0
AagrBONN_evm.TU.Sc2ySwM_228.4582 Anthoceros agrestis HOM05D016606 ORTHO05D018318 4.2e-60 235.3 198 55.6
AagrBONN_evm.TU.Sc2ySwM_368.978 Anthoceros agrestis HOM05D016606 ORTHO05D018318 2.1e-59 233.0 196 59.2
CBR_g22374 Chara braunii HOM05D016606 ORTHO05D018318 1.7e-40 170.2 178 44.4
AagrBONN_evm.TU.Sc2ySwM_228.4584 Anthoceros agrestis HOM05D016606 ORTHO05D018318 2.1e-11 73.6 60 56.7
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 1.2e-09 67.8 167 28.1
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 5.8e-09 65.5 156 28.2
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 1.3e-08 64.3 156 28.2
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.2e-08 63.5 158 28.5
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 4.9e-08 62.4 156 30.1
Nn4g23575 Nelumbo nucifera HOM05D006847 ORTHO05D008685 4.9e-08 62.4 147 30.6
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 8.3e-08 61.6 147 29.3
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.1e-07 61.2 161 26.1
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 1.1e-07 61.2 155 26.5
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 1.1e-07 61.2 156 28.2
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 1.1e-07 61.2 158 27.2
PRCOL_00004088 Prasinoderma coloniale HOM05D016606 ORTHO05D018318 1.1e-07 61.2 149 31.5
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.4e-07 60.8 161 26.1
Cre06.g263550 Chlamydomonas reinhardtii HOM05D006847 ORTHO05D008685 1.4e-07 60.8 107 34.6
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 1.4e-07 60.8 161 26.7
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 1.9e-07 60.5 156 27.6
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 1.9e-07 60.5 159 27.7
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 2.4e-07 60.1 148 26.4
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 2.4e-07 60.1 159 27.7
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 2.4e-07 60.1 156 28.2
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 3.2e-07 59.7 156 28.2
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 3.2e-07 59.7 175 28.0
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 3.2e-07 59.7 156 26.9
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 4.1e-07 59.3 156 28.2
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 4.1e-07 59.3 157 26.8
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 4.1e-07 59.3 156 29.5
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 4.1e-07 59.3 158 24.7
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 4.1e-07 59.3 158 25.3
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 7.1e-07 58.5 158 26.6
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 7.1e-07 58.5 163 28.8
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 7.1e-07 58.5 162 28.4
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 9.2e-07 58.2 158 26.6
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 9.2e-07 58.2 161 25.5
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 9.2e-07 58.2 156 27.6
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 9.2e-07 58.2 156 26.9
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 9.2e-07 58.2 158 26.6
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 1.2e-06 57.8 170 26.5
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.2e-06 57.8 156 26.9
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 1.2e-06 57.8 156 27.6
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 2.7e-06 56.6 156 26.3
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.7e-06 56.6 149 26.8
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 3.5e-06 56.2 147 26.5
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 3.5e-06 56.2 157 28.7
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 3.5e-06 56.2 158 25.9
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 3.5e-06 56.2 157 26.1
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 3.5e-06 56.2 177 26.0
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 4.6e-06 55.8 161 26.1
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 4.6e-06 55.8 153 25.5
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 6.0e-06 55.5 159 26.4
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 6.0e-06 55.5 148 29.7


User provided reference genes

Program Settings