Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.8e-111 406.0 210 100.0
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 4.8e-48 195.3 211 49.8
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 1.9e-44 183.3 209 48.8
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 1.9e-44 183.3 208 49.5
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 3.2e-44 182.6 212 48.6
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 7.1e-44 181.4 215 46.0
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 4.6e-43 178.7 212 48.6
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 7.9e-43 177.9 213 49.3
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 7.9e-43 177.9 212 47.6
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 2.3e-42 176.4 215 47.9
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 3.9e-42 175.6 212 46.7
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 5.1e-42 175.3 209 47.4
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 6.7e-42 174.9 212 44.8
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 6.7e-42 174.9 208 47.6
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 6.7e-42 174.9 205 51.7
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 1.1e-41 174.1 209 47.8
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 2.5e-41 172.9 210 47.1
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 2.5e-41 172.9 208 48.1
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 2.5e-41 172.9 214 47.2
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 3.3e-41 172.6 212 47.6
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 4.3e-41 172.2 208 48.6
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 4.3e-41 172.2 211 47.9
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 4.3e-41 172.2 205 50.2
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 5.6e-41 171.8 212 47.2
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 5.6e-41 171.8 209 45.5
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 9.6e-41 171.0 213 46.5
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 1.3e-40 170.6 212 47.2
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 1.3e-40 170.6 208 46.6
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 1.6e-40 170.2 211 46.4
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 1.6e-40 170.2 210 47.1
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 1.6e-40 170.2 213 46.9
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 1.6e-40 170.2 207 48.3
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 2.8e-40 169.5 208 47.1
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 2.8e-40 169.5 211 46.0
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 3.7e-40 169.1 209 45.5
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 3.7e-40 169.1 212 45.3
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 3.7e-40 169.1 212 44.8
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 3.7e-40 169.1 213 46.0
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 3.7e-40 169.1 188 51.1
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 4.8e-40 168.7 142 62.7
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 4.8e-40 168.7 211 45.0
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 4.8e-40 168.7 209 46.9
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 6.2e-40 168.3 214 45.3
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 6.2e-40 168.3 212 48.1
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 6.2e-40 168.3 209 45.5
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 6.2e-40 168.3 209 45.9
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 6.2e-40 168.3 209 45.5
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 6.2e-40 168.3 212 43.4
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 6.2e-40 168.3 209 47.4
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 6.2e-40 168.3 207 47.8
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 8.1e-40 167.9 208 46.6
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 1.1e-39 167.5 206 46.1
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 1.4e-39 167.2 210 45.2
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.8e-39 166.8 206 45.6
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 2.4e-39 166.4 213 46.5
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 2.4e-39 166.4 212 47.2
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 2.4e-39 166.4 214 45.3
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 2.4e-39 166.4 209 46.9
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 3.1e-39 166.0 209 44.5
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 3.1e-39 166.0 210 45.2
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 3.1e-39 166.0 206 48.5
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 3.1e-39 166.0 211 47.4
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 3.1e-39 166.0 211 47.4
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 4.0e-39 165.6 206 45.6
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 4.0e-39 165.6 211 46.0
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 5.3e-39 165.2 212 43.4
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 5.3e-39 165.2 212 43.4
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 6.9e-39 164.9 210 46.7
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 6.9e-39 164.9 209 45.9
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 6.9e-39 164.9 181 51.4
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 9.0e-39 164.5 210 46.7
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 9.0e-39 164.5 211 46.9
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 1.2e-38 164.1 210 46.2
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.2e-38 164.1 210 46.2
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.5e-38 163.7 210 46.2
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 2.6e-38 162.9 210 45.2
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 2.6e-38 162.9 209 45.9
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 2.6e-38 162.9 207 45.4
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.4e-38 162.5 198 47.0
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 4.5e-38 162.2 209 45.9
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.5e-38 162.2 210 45.7
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 4.5e-38 162.2 214 45.8
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 4.5e-38 162.2 210 43.8
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 5.8e-38 161.8 212 43.4
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 7.6e-38 161.4 212 43.9
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 1.7e-37 160.2 209 44.5
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 1.7e-37 160.2 210 43.3
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 2.9e-37 159.5 210 43.8
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.4e-36 157.1 210 46.2
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 2.5e-36 156.4 210 42.4
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 4.2e-36 155.6 209 43.5
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 5.5e-36 155.2 208 44.7
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 1.2e-35 154.1 203 43.8
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 4.6e-35 152.1 209 43.5
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 6.0e-35 151.8 212 44.8
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 2.3e-34 149.8 213 44.6
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 3.0e-34 149.4 171 47.4
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 2.5e-33 146.4 210 43.3
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 2.8e-32 142.9 155 50.3
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 4.8e-32 142.1 197 44.2
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 2.2e-29 133.3 309 33.0
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 2.5e-28 129.8 156 48.7
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 5.7e-25 118.6 157 43.3
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 8.5e-21 104.8 105 48.6
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.1e-20 104.4 121 44.6
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 3.4e-14 82.8 86 47.7
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 1.7e-13 80.5 92 43.5
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 3.2e-12 76.3 65 53.8
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 7.2e-12 75.1 65 53.8
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 3.7e-08 62.8 56 57.1
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 8.2e-08 61.6 59 50.8
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.0e-07 58.5 60 46.7
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.2e-06 57.8 80 41.2
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.5e-06 57.4 60 45.0


User provided reference genes

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