Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.8e-201 705.7 348 100.0
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 5.5e-118 428.3 319 67.7
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.8e-116 423.3 319 65.8
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 4.7e-109 398.7 323 62.2
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 3.0e-108 396.0 323 59.4
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 3.0e-108 396.0 322 59.9
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 4.0e-108 395.6 339 58.1
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 6.8e-108 394.8 318 60.1
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.2e-107 394.0 324 59.9
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 4.4e-107 392.1 324 59.6
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 7.5e-107 391.3 322 59.6
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 7.5e-107 391.3 318 60.1
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.7e-106 390.2 327 59.3
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 4.9e-106 388.7 318 59.4
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 6.4e-106 388.3 334 57.2
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 6.4e-106 388.3 335 57.9
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 8.3e-106 387.9 322 59.3
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 8.3e-106 387.9 325 58.8
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 8.3e-106 387.9 333 57.4
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.1e-105 387.5 318 60.1
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.1e-105 387.5 322 59.0
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.4e-105 387.1 322 59.0
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.4e-105 387.1 318 60.1
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 3.2e-105 386.0 322 58.1
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 3.2e-105 386.0 341 56.6
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 5.4e-105 385.2 318 60.1
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 7.0e-105 384.8 317 59.9
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 1.2e-104 384.0 319 58.9
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.2e-104 384.0 316 59.8
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 1.2e-104 384.0 318 58.2
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 2.7e-104 382.9 330 58.5
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 3.5e-104 382.5 330 58.5
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 4.6e-104 382.1 339 56.3
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 7.8e-104 381.3 324 58.0
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 7.8e-104 381.3 330 57.0
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.7e-103 380.2 318 59.1
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.7e-103 380.2 325 59.7
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 2.3e-103 379.8 318 58.5
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 2.3e-103 379.8 339 56.6
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.3e-103 379.8 327 58.1
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 3.0e-103 379.4 322 58.4
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 3.0e-103 379.4 318 58.8
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 3.9e-103 379.0 319 59.2
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 5.0e-103 378.6 325 57.2
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 5.0e-103 378.6 328 58.2
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.0e-103 378.6 326 58.0
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 6.6e-103 378.3 330 55.8
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-102 377.1 326 57.7
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.5e-102 377.1 335 55.5
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.5e-102 377.1 323 58.5
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.9e-102 376.7 323 57.0
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 2.5e-102 376.3 328 55.8
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 3.3e-102 375.9 319 58.9
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 5.6e-102 375.2 325 56.6
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 9.5e-102 374.4 327 56.0
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.2e-101 374.0 338 54.4
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.2e-101 374.0 318 59.1
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 2.8e-101 372.9 323 57.9
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 2.8e-101 372.9 323 57.6
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 4.7e-101 372.1 319 58.3
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 4.7e-101 372.1 334 56.3
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 6.2e-101 371.7 330 55.5
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 8.0e-101 371.3 318 58.8
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 2.3e-100 369.8 322 58.4
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 3.1e-100 369.4 330 57.3
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 4.0e-100 369.0 327 56.0
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 4.0e-100 369.0 380 50.3
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 5.2e-100 368.6 322 55.9
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 6.8e-100 368.2 327 56.0
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 8.9e-100 367.9 330 56.1
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.4e-99 365.9 379 50.1
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 4.4e-99 365.5 318 56.9
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 4.4e-99 365.5 317 59.0
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 9.8e-99 364.4 349 53.9
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 1.7e-98 363.6 298 61.1
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.4e-97 360.5 326 56.1
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 1.2e-96 357.5 302 58.9
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.6e-96 357.1 297 59.6
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 2.0e-96 356.7 333 55.3
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 6.6e-95 351.7 302 58.3
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 7.3e-94 348.2 303 57.4
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 7.3e-94 348.2 321 54.8
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 8.1e-93 344.7 317 55.5
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.3e-92 343.2 321 54.8
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 4.4e-91 339.0 359 49.3
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 4.4e-91 339.0 359 49.3
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 9.8e-91 337.8 366 48.9
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.9e-89 333.6 353 49.9
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 5.1e-87 325.5 281 57.3
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.1e-86 324.3 286 57.7
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.5e-86 323.9 345 50.1
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.5e-86 323.9 324 53.7
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 5.6e-86 322.0 301 55.1
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 2.8e-85 319.7 318 51.9
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 2.8e-85 319.7 334 49.1
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 4.7e-85 318.9 280 56.8
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.4e-84 317.4 258 60.9
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 1.2e-83 314.3 305 52.8
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.5e-83 313.9 331 50.5
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 3.4e-83 312.8 284 54.6
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 3.4e-83 312.8 307 50.5
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 3.4e-83 312.8 293 53.6
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 9.9e-83 311.2 266 58.6
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 9.9e-83 311.2 377 46.9
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 6.4e-82 308.5 277 56.0
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 7.3e-78 295.0 284 53.9
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 9.6e-78 294.7 314 49.0
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 3.1e-76 289.7 313 51.4
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 1.2e-72 277.7 234 59.8
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 5.1e-71 272.3 236 58.9
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 9.6e-70 268.1 394 41.1
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.3e-66 257.7 226 56.2
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 4.2e-65 252.7 277 50.5
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.1e-60 236.5 222 56.3
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 2.0e-59 233.8 280 47.1
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 1.2e-56 224.6 260 45.4
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 2.3e-55 220.3 325 41.2
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 4.2e-49 199.5 225 48.0
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 3.6e-40 169.9 272 36.8
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 4.8e-37 159.5 132 62.1
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.1e-36 158.3 184 46.2
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 2.4e-28 130.6 126 48.4
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 4.1e-28 129.8 128 50.0
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.0e-26 125.2 132 50.8
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.3e-18 98.2 91 51.6
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 3.1e-12 77.0 71 54.9
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.1e-09 68.6 84 41.7
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 3.2e-09 67.0 39 69.2
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.4e-07 61.6 46 63.0


User provided reference genes

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