Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_18530 Physcomitrium patens HOM05D004716 ORTHO05D005646 0.0e+00 1256.1 630 100.0
Pp3c5_6660 Physcomitrium patens HOM05D004716 ORTHO05D005646 0.0e+00 1080.1 630 85.4
Mapoly0014s0164 Marchantia polymorpha HOM05D004716 ORTHO05D005646 1.1e-230 803.5 651 65.7
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis HOM05D004716 ORTHO05D005646 5.7e-206 721.5 670 58.2
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 1.2e-187 660.6 639 55.7
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 4.9e-165 585.5 662 48.8
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 4.2e-164 582.4 653 50.1
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 4.2e-164 582.4 643 52.1
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 2.7e-163 579.7 650 49.4
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 3.5e-163 579.3 645 50.1
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 3.5e-163 579.3 647 49.6
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 3.5e-163 579.3 647 49.6
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 3.5e-163 579.3 645 49.8
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 4.6e-163 578.9 633 50.4
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 7.8e-163 578.2 658 50.2
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 3.0e-162 576.2 667 48.7
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 3.9e-162 575.9 647 50.4
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 8.7e-162 574.7 645 49.5
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 1.1e-161 574.3 653 49.3
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 1.9e-161 573.5 658 48.0
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 4.3e-161 572.4 644 49.7
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 4.3e-161 572.4 648 49.7
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 7.3e-161 571.6 644 50.2
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 1.3e-160 570.9 642 49.1
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 2.8e-160 569.7 643 48.7
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 2.8e-160 569.7 634 50.9
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 2.8e-160 569.7 653 49.0
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 6.2e-160 568.5 653 49.8
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 3.1e-159 566.2 606 52.3
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 4.0e-159 565.8 654 48.6
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 9.0e-159 564.7 639 49.5
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 9.0e-159 564.7 648 47.8
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 1.5e-158 563.9 647 49.1
AUR62026717 Chenopodium quinoa HOM05D004716 ORTHO05D005646 2.6e-158 563.1 644 48.8
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 2.6e-158 563.1 653 49.0
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 2.6e-158 563.1 637 50.4
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 3.4e-158 562.8 639 50.4
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 4.4e-158 562.4 661 48.6
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 4.4e-158 562.4 651 47.9
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 9.9e-158 561.2 646 48.1
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.7e-157 560.5 637 50.4
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 2.2e-157 560.1 642 48.8
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 2.2e-157 560.1 646 49.7
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 2.2e-157 560.1 647 48.4
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 2.9e-157 559.7 649 48.1
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 3.8e-157 559.3 637 50.2
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 3.8e-157 559.3 650 49.1
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 6.4e-157 558.5 651 48.7
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.1e-156 557.8 638 50.6
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 1.1e-156 557.8 639 48.4
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 1.4e-156 557.4 645 48.8
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 2.4e-156 556.6 647 48.5
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 3.2e-156 556.2 647 48.5
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 1.2e-155 554.3 640 48.6
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 2.1e-155 553.5 631 50.2
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 3.5e-155 552.7 647 49.1
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 4.6e-155 552.4 649 47.8
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 7.9e-155 551.6 645 47.9
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 1.0e-154 551.2 638 48.1
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 1.7e-154 550.4 649 47.1
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 6.6e-154 548.5 648 46.5
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 8.7e-154 548.1 673 46.1
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 1.1e-153 547.7 644 49.1
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.1e-153 547.7 649 47.6
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 1.9e-153 547.0 638 48.1
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 2.5e-153 546.6 659 48.1
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 3.3e-153 546.2 646 49.2
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 3.3e-153 546.2 644 48.9
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 3.3e-153 546.2 650 47.4
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 4.3e-153 545.8 645 48.7
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 4.3e-153 545.8 656 48.3
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 5.6e-153 545.4 647 48.4
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 9.6e-153 544.7 650 48.0
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 1.3e-152 544.3 639 47.1
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 1.3e-152 544.3 646 47.1
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 1.3e-152 544.3 644 47.4
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 1.6e-152 543.9 644 48.6
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 1.6e-152 543.9 644 48.6
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 2.1e-152 543.5 638 47.2
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 2.8e-152 543.1 635 47.1
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 6.2e-152 542.0 653 47.9
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 1.4e-151 540.8 520 54.0
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 1.8e-151 540.4 639 46.8
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.4e-151 540.0 639 46.6
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 5.3e-151 538.9 646 47.1
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 6.9e-151 538.5 655 47.3
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 9.0e-151 538.1 651 47.9
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 9.0e-151 538.1 648 48.5
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 2.6e-150 536.6 643 46.2
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 4.5e-150 535.8 644 46.4
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 1.3e-149 534.3 644 48.1
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 1.3e-149 534.3 649 46.5
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 6.4e-149 531.9 655 46.4
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 2.4e-148 530.0 654 47.4
Sed0004003 Sechium edule HOM05D004716 ORTHO05D005646 5.5e-148 528.9 516 52.5
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 2.1e-147 526.9 638 46.4
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 2.7e-147 526.6 638 45.9
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 1.0e-146 524.6 654 46.2
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 1.3e-146 524.2 651 48.1
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 3.0e-146 523.1 639 46.2
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 1.5e-145 520.8 651 45.3
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 2.1e-144 516.9 643 47.3
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 2.1e-144 516.9 643 44.9
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 3.7e-144 516.2 637 46.5
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 1.8e-143 513.8 654 46.9
Zm00001eb422340 Zea mays HOM05D004716 ORTHO05D005646 1.8e-143 513.8 647 46.5
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 6.9e-143 511.9 770 41.0
TPR.G36694 Trifolium pratense HOM05D004716 ORTHO05D005646 3.4e-142 509.6 530 50.4
Nn1g06102 Nelumbo nucifera HOM05D004716 ORTHO05D005646 7.6e-142 508.4 487 54.2
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 5.5e-140 502.3 517 50.9
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 3.0e-138 496.5 632 44.9
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 1.1e-135 488.0 550 48.7
CBR_g11170 Chara braunii HOM05D004716 ORTHO05D005646 4.1e-135 486.1 558 48.2
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.5e-132 476.9 643 44.9
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 9.3e-132 474.9 489 51.3
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 1.0e-130 471.5 636 43.1
CSS0049856 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 1.5e-129 467.6 461 53.1
ATR0772G093 Amborella trichopoda HOM05D004716 ORTHO05D005646 1.5e-126 457.6 461 51.4
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 4.5e-126 456.1 682 41.5
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 1.7e-125 454.1 641 44.6
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 2.9e-125 453.4 654 42.8
Sc02g0004170 Simmondsia chinensis HOM05D004716 ORTHO05D005646 1.1e-124 451.4 458 51.1
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 4.2e-124 449.5 648 42.0
Ca_25988_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 3.3e-121 439.9 398 54.5
Cpa.g.sc21.190 Carica papaya HOM05D004716 ORTHO05D005646 4.7e-115 419.5 430 50.7
Oeu014493.1 Olea europaea HOM05D004716 ORTHO05D005646 3.7e-112 409.8 364 56.9
Psat6g193200 Pisum sativum HOM05D004716 ORTHO05D005646 6.3e-112 409.1 318 62.9
Zm00001eb422260 Zea mays HOM05D004716 ORTHO05D005646 8.0e-107 392.1 312 60.6
Psat6g193040 Pisum sativum HOM05D004716 ORTHO05D005646 2.3e-106 390.6 304 61.8
Os04g0421800 Oryza sativa ssp. japonica HOM05D004716 ORTHO05D005646 3.5e-102 376.7 296 60.5
vmacro21155 Vaccinium macrocarpon HOM05D004716 ORTHO05D005646 9.4e-100 368.6 311 57.9
HanXRQChr10g0277841 Helianthus annuus HOM05D004716 ORTHO05D005646 1.1e-84 318.5 305 55.4
Zm00001eb422280 Zea mays HOM05D004716 ORTHO05D005646 6.1e-83 312.8 255 58.4
Zm00001eb422320 Zea mays HOM05D004716 ORTHO05D005646 6.1e-83 312.8 255 58.4
PRCOL_00002924 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 5.6e-60 236.5 428 37.9
Actinidia10653 Actinidia chinensis HOM05D004716 ORTHO05D005646 8.9e-50 202.6 229 52.0
Cre06.g286600 Chlamydomonas reinhardtii HOM05D004716 ORTHO05D005646 6.0e-30 136.7 290 35.5
CAN.G309.90 Capsicum annuum HOM05D004716 ORTHO05D005646 3.1e-26 124.4 177 41.8
ATR0772G018 Amborella trichopoda HOM05D004716 ORTHO05D005646 5.8e-25 120.2 219 38.4
Cpa.g.sc21.191 Carica papaya HOM05D004716 ORTHO05D005646 5.8e-25 120.2 189 44.4
PRCOL_00004133 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 1.4e-23 115.5 341 30.5
VMungo0464G1352 Vigna mungo HOM05D004716 ORTHO05D005646 2.7e-22 111.3 266 32.7
SEGI_31186 Sequoiadendron giganteum HOM05D004716 ORTHO05D005646 1.3e-21 109.0 160 45.0
Actinidia13988 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.1e-18 99.4 87 54.0
Actinidia10651 Actinidia chinensis HOM05D004716 ORTHO05D005646 3.0e-13 81.3 179 35.2
TAR636G3535 Trochodendron aralioides HOM05D004716 ORTHO05D005646 2.4e-10 71.6 99 39.4
Ca_25987_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.9e-07 62.0 159 33.3


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