Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 3.8e-143 511.5 268 100.0
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 4.3e-110 401.7 270 81.1
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 2.4e-97 359.4 280 72.5
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 3.9e-87 325.5 274 69.3
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 1.4e-81 307.0 268 66.4
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 2.7e-80 302.8 267 64.4
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 7.9e-80 301.2 290 61.7
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.0e-79 300.8 265 64.2
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.3e-79 299.7 290 61.4
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 8.7e-79 297.7 272 63.6
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 1.5e-78 297.0 271 63.1
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.9e-78 296.6 273 62.3
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 2.5e-78 296.2 282 62.1
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 7.4e-78 294.7 273 61.9
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.3e-77 293.9 271 62.7
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 1.6e-77 293.5 274 63.1
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 2.1e-77 293.1 271 62.4
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 8.1e-77 291.2 272 63.6
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.1e-76 290.8 275 63.6
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 4.0e-76 288.9 284 61.6
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 4.0e-76 288.9 273 61.5
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 5.3e-76 288.5 253 65.6
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 9.0e-76 287.7 245 66.5
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 9.0e-76 287.7 245 66.5
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 9.0e-76 287.7 277 61.0
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 9.0e-76 287.7 270 62.6
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 2.0e-75 286.6 245 66.1
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 2.6e-75 286.2 247 68.0
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 3.4e-75 285.8 245 66.1
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 3.4e-75 285.8 246 67.1
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 5.8e-75 285.0 255 63.9
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 5.8e-75 285.0 245 64.9
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 7.6e-75 284.6 254 66.1
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 9.9e-75 284.3 250 64.0
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 6.4e-74 281.6 247 65.6
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 8.4e-74 281.2 289 59.2
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.9e-73 280.0 286 58.4
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 2.5e-73 279.6 252 65.5
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 3.2e-73 279.3 250 65.6
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 3.2e-73 279.3 256 63.7
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.2e-73 279.3 277 61.4
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 4.2e-73 278.9 286 59.8
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 4.2e-73 278.9 283 58.7
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 5.5e-73 278.5 250 64.4
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 5.5e-73 278.5 281 58.7
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 7.1e-73 278.1 273 61.2
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 1.6e-72 276.9 301 57.5
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.6e-72 276.9 289 58.8
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 2.7e-72 276.2 254 63.8
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 3.5e-72 275.8 256 63.3
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 3.5e-72 275.8 270 60.7
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 3.5e-72 275.8 275 61.1
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 7.9e-72 274.6 283 59.0
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 2.3e-71 273.1 286 57.0
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 3.9e-71 272.3 282 57.8
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 3.9e-71 272.3 254 63.8
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 6.7e-71 271.6 277 58.5
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 8.7e-71 271.2 268 60.1
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.5e-70 270.4 249 61.4
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 2.5e-70 269.6 272 59.2
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 3.3e-70 269.2 280 57.9
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 4.3e-70 268.9 297 55.2
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 4.3e-70 268.9 217 70.0
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 9.6e-70 267.7 268 58.6
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 1.6e-69 266.9 277 58.1
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 1.6e-69 266.9 302 55.0
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 1.6e-69 266.9 281 57.7
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 2.8e-69 266.2 246 62.6
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 2.8e-69 266.2 284 57.4
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 3.7e-69 265.8 293 55.6
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 4.8e-69 265.4 246 62.6
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 6.2e-69 265.0 279 57.3
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.2e-69 265.0 279 57.3
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.2e-69 265.0 275 58.2
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 8.2e-69 264.6 282 57.8
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.4e-68 263.8 211 68.7
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 1.4e-68 263.8 277 53.8
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 2.4e-68 263.1 303 53.8
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 5.3e-68 261.9 253 60.9
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 9.0e-68 261.2 303 53.8
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 4.5e-67 258.8 302 54.3
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.5e-67 258.8 279 57.0
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.5e-67 258.8 279 57.0
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 5.8e-67 258.5 308 53.2
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 7.6e-67 258.1 272 57.7
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 1.0e-66 257.7 325 52.3
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 2.9e-66 256.1 296 55.1
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 4.9e-66 255.4 311 52.1
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.2e-64 250.8 302 52.6
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 1.2e-64 250.8 271 56.5
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 6.0e-64 248.4 304 52.3
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 6.7e-63 245.0 269 53.2
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 2.5e-62 243.0 281 54.1
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 9.7e-62 241.1 311 50.5
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 2.8e-61 239.6 214 61.2
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 1.1e-60 237.7 283 52.7
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 2.0e-59 233.4 259 54.4
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.2e-56 224.2 183 66.1
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 7.9e-56 221.5 281 51.6
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 6.7e-55 218.4 392 40.6
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 1.5e-54 217.2 281 50.5
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 7.4e-54 214.9 176 67.6
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 9.7e-54 214.5 177 67.8
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 7.4e-46 188.3 136 75.7
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.8e-44 183.7 154 64.3
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.1e-41 174.5 137 70.1
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 1.9e-41 173.7 132 72.0
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 7.4e-38 161.8 159 59.7
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 1.0e-31 141.4 182 51.6
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 5.7e-30 135.6 112 66.1
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.8e-28 130.6 132 57.6
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 4.7e-24 115.9 77 75.3
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 2.6e-22 110.2 161 45.3
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 4.2e-17 92.8 94 58.5
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 3.4e-14 83.2 249 30.9
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 4.4e-14 82.8 110 50.0
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 2.2e-13 80.5 105 51.4
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 2.0e-06 57.4 72 51.4
Cre10.g423350 Chlamydomonas reinhardtii HOM05D006579 ORTHO05D007783 9.8e-06 55.1 191 29.3


User provided reference genes

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