Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 1.4e-153 546.2 265 100.0
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 8.1e-69 264.6 207 64.7
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.1e-60 236.1 240 55.8
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 8.9e-60 234.6 231 56.3
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 8.9e-60 234.6 231 56.3
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 3.4e-59 232.6 180 62.2
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 9.9e-59 231.1 238 52.5
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 9.9e-59 231.1 180 63.3
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 1.7e-58 230.3 254 52.8
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 2.2e-58 229.9 184 62.0
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 2.2e-58 229.9 184 62.0
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 2.2e-58 229.9 238 52.1
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 2.9e-58 229.6 230 54.8
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.9e-58 228.8 181 62.4
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 4.9e-58 228.8 184 61.4
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 1.1e-57 227.6 194 59.8
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 1.1e-57 227.6 184 59.8
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 1.4e-57 227.3 182 62.6
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 1.4e-57 227.3 238 54.6
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 1.9e-57 226.9 236 54.7
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 1.9e-57 226.9 228 53.9
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 4.2e-57 225.7 186 59.7
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 4.2e-57 225.7 184 62.0
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 5.4e-57 225.3 196 60.7
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 9.2e-57 224.6 183 61.2
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 9.2e-57 224.6 183 61.2
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 9.2e-57 224.6 252 51.2
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 1.2e-56 224.2 163 67.5
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 1.6e-56 223.8 239 53.1
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 1.6e-56 223.8 216 56.0
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 1.6e-56 223.8 186 59.1
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 2.1e-56 223.4 257 52.9
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 2.7e-56 223.0 223 55.2
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.5e-56 222.6 184 63.0
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.5e-56 222.6 184 63.0
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 3.5e-56 222.6 184 60.9
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 3.5e-56 222.6 194 58.2
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 3.5e-56 222.6 194 59.8
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 4.6e-56 222.2 183 59.0
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 4.6e-56 222.2 183 61.2
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 6.0e-56 221.9 179 59.8
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 6.0e-56 221.9 237 53.2
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 6.0e-56 221.9 182 61.0
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 7.8e-56 221.5 181 61.3
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 7.8e-56 221.5 229 52.0
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 1.0e-55 221.1 251 51.8
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 1.0e-55 221.1 251 51.8
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 1.0e-55 221.1 184 62.5
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 1.3e-55 220.7 184 60.9
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.3e-55 220.7 184 62.5
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.7e-55 220.3 184 62.5
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 1.7e-55 220.3 231 51.1
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.7e-55 220.3 194 57.2
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.7e-55 220.3 194 57.2
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 3.0e-55 219.5 201 57.7
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 3.9e-55 219.2 182 60.4
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 3.9e-55 219.2 228 53.9
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 3.9e-55 219.2 188 58.5
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 5.1e-55 218.8 255 51.4
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.1e-55 218.8 255 51.4
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 6.6e-55 218.4 191 59.2
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 6.6e-55 218.4 240 51.7
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 6.6e-55 218.4 188 56.9
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 6.6e-55 218.4 239 51.9
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 8.7e-55 218.0 189 56.1
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 1.1e-54 217.6 193 58.0
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 1.9e-54 216.9 205 56.1
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 1.9e-54 216.9 241 50.6
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 3.3e-54 216.1 186 58.1
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 3.3e-54 216.1 184 60.3
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 4.3e-54 215.7 182 59.3
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 4.3e-54 215.7 198 58.1
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 5.6e-54 215.3 227 52.4
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 7.3e-54 214.9 182 58.2
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 9.6e-54 214.5 195 57.9
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 1.6e-53 213.8 184 58.2
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 2.1e-53 213.4 268 46.6
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 2.8e-53 213.0 167 61.1
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 2.8e-53 213.0 244 49.6
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 6.2e-53 211.8 159 64.2
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 6.2e-53 211.8 235 48.5
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 6.2e-53 211.8 172 58.7
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 3.1e-52 209.5 226 51.3
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 3.1e-52 209.5 259 47.9
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 3.1e-52 209.5 259 47.9
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 3.1e-52 209.5 258 47.7
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 4.0e-52 209.1 155 61.9
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 5.3e-52 208.8 235 47.7
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 1.2e-51 207.6 234 47.4
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 1.2e-51 207.6 242 49.6
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 2.0e-51 206.8 267 45.7
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 1.3e-50 204.1 171 58.5
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.7e-50 203.8 214 50.9
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 2.2e-50 203.4 242 46.3
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 1.4e-49 200.7 181 53.6
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 1.4e-49 200.7 181 53.6
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 1.9e-49 200.3 181 53.6
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 1.9e-49 200.3 181 53.6
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 2.1e-48 196.8 155 63.9
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 3.5e-48 196.1 226 47.3
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 6.0e-48 195.3 266 42.9
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.7e-47 193.7 174 56.9
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 4.5e-43 179.1 110 76.4
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 9.9e-43 177.9 120 68.3
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 1.8e-39 167.2 131 61.8
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 1.1e-36 157.9 237 43.5
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 1.3e-34 151.0 128 60.9
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 5.5e-33 145.6 184 46.2
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 3.5e-32 142.9 130 54.6
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.3e-31 141.0 111 62.2
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 1.5e-30 137.5 133 51.1
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 1.5e-30 137.5 90 67.8
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 5.3e-28 129.0 89 67.4
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 9.0e-28 128.3 152 46.1
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 1.7e-18 97.4 54 81.5
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 2.1e-16 90.5 96 52.1
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 4.6e-16 89.4 93 50.5
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 1.5e-11 74.3 70 51.4
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.5e-11 74.3 47 68.1
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 1.4e-07 61.2 31 87.1
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 1.5e-06 57.8 87 36.8


User provided reference genes

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