Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c6_1170 Physcomitrium patens HOM05D002956 ORTHO05D008031 1.7e-44 182.2 88 100.0
Pp3c3_3430 Physcomitrium patens HOM05D002956 ORTHO05D008031 1.4e-30 136.0 106 66.0
Prupe.4G260400 Prunus persica HOM05D002956 ORTHO05D008031 8.5e-15 83.6 72 56.9
Nn7g36838 Nelumbo nucifera HOM05D002956 ORTHO05D008031 2.1e-13 79.0 81 48.1
Aqoxy2G00442 Aquilegia oxysepala HOM05D002956 ORTHO05D008031 3.6e-13 78.2 72 48.6
CANSAT54G1478 Cannabis sativa HOM05D002956 ORTHO05D008031 3.6e-13 78.2 79 50.6
PSO384G3941 Papaver somniferum HOM05D002956 ORTHO05D008031 4.6e-13 77.8 72 51.4
FvH4_3g28160 Fragaria vesca HOM05D002956 ORTHO05D008031 6.1e-13 77.4 72 51.4
Sp4g08660 Schrenkiella parvula HOM05D002956 ORTHO05D008031 6.1e-13 77.4 69 52.2
THA.LOC104826460 Tarenaya hassleriana HOM05D002956 ORTHO05D008031 3.0e-12 75.1 72 47.2
PSO339G2954 Papaver somniferum HOM05D002956 ORTHO05D008031 5.1e-12 74.3 67 52.2
Eucgr.J00675 Eucalyptus grandis HOM05D002956 ORTHO05D008031 6.7e-12 73.9 78 48.7
CiPaw.14G111000 Carya illinoinensis HOM05D002956 ORTHO05D008031 1.1e-11 73.2 81 45.7
Phvul.005G020600 Phaseolus vulgaris HOM05D002956 ORTHO05D008031 1.5e-11 72.8 75 45.3
Gohir.D07G125600 Gossypium hirsutum HOM05D002956 ORTHO05D008031 2.0e-11 72.4 72 50.0
Potri.009G068400 Populus trichocarpa HOM05D002956 ORTHO05D008031 2.0e-11 72.4 72 51.4
Duzib150G0193 Durio zibethinus HOM05D002956 ORTHO05D008031 4.3e-11 71.2 72 51.4
TWI31G0384 Tripterygium wilfordii HOM05D002956 ORTHO05D008031 5.7e-11 70.9 101 42.6
Gohir.A07G121300 Gossypium hirsutum HOM05D002956 ORTHO05D008031 7.4e-11 70.5 72 50.0
Thhalv10002083m.g Eutrema salsugineum HOM05D002956 ORTHO05D008031 1.3e-10 69.7 72 48.6
Os07g0641600 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D008031 1.3e-10 69.7 72 45.8
PGR119G0612 Punica granatum HOM05D002956 ORTHO05D008031 3.7e-10 68.2 81 44.4
Glyma.08G154800 Glycine max HOM05D002956 ORTHO05D008031 8.2e-10 67.0 75 41.3
Manes.02G137300 Manihot esculenta HOM05D002956 ORTHO05D008031 1.1e-09 66.6 74 50.0
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 1.8e-09 65.9 76 44.7
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 2.4e-09 65.5 72 47.2
Aa31LG5G8970 Aethionema arabicum HOM05D002956 ORTHO05D008031 3.1e-09 65.1 73 46.6
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 5.3e-09 64.3 72 47.2
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 9.1e-09 63.5 75 45.3
vmacro04047 Vaccinium macrocarpon HOM05D002956 ORTHO05D008031 9.1e-09 63.5 89 38.2
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 1.5e-08 62.8 76 43.4
CARHR118990 Cardamine hirsuta HOM05D002956 ORTHO05D008031 1.5e-08 62.8 80 41.2
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 2.0e-08 62.4 72 45.8
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 7.7e-08 60.5 75 41.3
Psat4g143640 Pisum sativum HOM05D002956 ORTHO05D008031 7.7e-08 60.5 66 42.4
AL4G20000 Arabidopsis lyrata HOM05D002956 ORTHO05D008031 1.0e-07 60.1 78 42.3
QL01p016670 Quercus lobata HOM05D002956 ORTHO05D008031 1.0e-07 60.1 98 36.7
Lj6g0022582 Lotus japonicus HOM05D002956 ORTHO05D008031 1.3e-07 59.7 75 42.7
SEGI_28475 Sequoiadendron giganteum HOM05D002956 ORTHO05D008031 1.3e-07 59.7 82 36.6
ATR0307G044 Amborella trichopoda HOM05D002956 ORTHO05D008031 1.7e-07 59.3 77 40.3
ClCG02G022710 Citrullus lanatus HOM05D002956 ORTHO05D008031 2.9e-07 58.5 109 34.9
CBR_g39846 Chara braunii HOM05D002956 ORTHO05D008031 3.8e-07 58.2 71 43.7
Lalb_Chr15g0078511 Lupinus albus HOM05D002956 ORTHO05D008031 3.8e-07 58.2 71 42.3
TPR.G11875 Trifolium pratense HOM05D002757 ORTHO05D008031 3.8e-07 58.2 75 40.0
MBI19_g19211_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D008031 8.5e-07 57.0 104 36.5
Sed0014482 Sechium edule HOM05D002956 ORTHO05D008031 1.9e-06 55.8 95 37.9
Sabra09G0051500 Salix brachista HOM05D002956 ORTHO05D008031 2.5e-06 55.5 94 37.2
DCAR_006894 Daucus carota HOM05D002956 ORTHO05D008031 3.2e-06 55.1 78 39.7
Sc23g0005760 Simmondsia chinensis HOM05D001920 ORTHO05D004895 5.5e-06 54.3 54 48.1
Ciclev10018203m.g Citrus clementina HOM05D002956 ORTHO05D008031 9.4e-06 53.5 72 40.3
Lsat_1_v5_gn_5_63100 Lactuca sativa HOM05D002956 ORTHO05D008031 9.4e-06 53.5 81 40.7


User provided reference genes

Program Settings