Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 9.1e-281 969.5 472 100.0
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 6.5e-146 521.5 428 59.8
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 2.3e-143 513.1 423 56.7
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 7.0e-140 501.5 440 55.7
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 2.2e-138 496.5 411 57.4
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.1e-137 494.2 421 56.1
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 5.5e-137 491.9 439 54.4
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 5.5e-137 491.9 443 54.0
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 2.1e-136 490.0 447 52.3
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 2.1e-136 490.0 434 54.4
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 4.7e-136 488.8 448 53.1
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 6.1e-136 488.4 437 53.5
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.0e-135 487.6 434 54.6
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.0e-135 487.6 418 56.9
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 1.8e-135 486.9 437 53.3
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 1.8e-135 486.9 447 52.1
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.2e-135 485.3 419 54.9
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 6.8e-135 485.0 446 53.1
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.2e-134 484.2 430 55.6
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 1.2e-134 484.2 432 54.6
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 1.5e-134 483.8 418 54.3
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 2.0e-134 483.4 442 53.8
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 4.4e-134 482.3 431 53.1
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 7.5e-134 481.5 414 55.1
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 1.3e-133 480.7 417 54.7
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 2.2e-133 479.9 398 56.5
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 2.2e-133 479.9 423 53.7
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 3.7e-133 479.2 424 55.0
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 4.8e-133 478.8 406 55.2
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.3e-133 478.4 424 54.2
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 8.3e-133 478.0 429 53.4
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 1.1e-132 477.6 418 53.8
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.1e-132 477.6 449 52.1
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 1.8e-132 476.9 445 53.3
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 1.8e-132 476.9 431 54.5
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 2.4e-132 476.5 400 55.8
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 5.4e-132 475.3 423 53.7
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 5.4e-132 475.3 410 54.1
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 5.4e-132 475.3 431 52.4
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 1.2e-131 474.2 414 55.8
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 1.6e-131 473.8 424 54.7
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 2.0e-131 473.4 434 53.0
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 5.9e-131 471.9 434 53.0
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 7.7e-131 471.5 418 55.0
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.0e-130 471.1 441 52.4
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 1.3e-130 470.7 439 51.0
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 2.3e-130 469.9 420 54.3
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 2.9e-130 469.5 432 53.5
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 2.9e-130 469.5 425 53.2
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 3.8e-130 469.2 402 56.0
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 5.0e-130 468.8 413 54.7
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 5.0e-130 468.8 447 50.8
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 6.6e-130 468.4 449 52.1
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 5.5e-129 465.3 429 53.1
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 7.2e-129 464.9 420 54.3
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 9.5e-129 464.5 437 53.1
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 4.7e-128 462.2 438 52.1
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 6.1e-128 461.8 423 52.7
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.0e-127 461.1 424 52.8
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 4.0e-127 459.1 427 52.9
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 5.2e-127 458.8 413 54.5
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 8.9e-127 458.0 414 52.9
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 2.0e-126 456.8 440 51.6
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 2.6e-126 456.4 414 54.1
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 7.5e-126 454.9 415 50.8
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.3e-125 454.1 447 51.0
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.7e-125 453.8 429 51.0
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 2.2e-125 453.4 398 54.0
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 8.3e-125 451.4 415 50.4
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 4.1e-124 449.1 382 55.0
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 1.0e-122 444.5 434 51.2
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 2.3e-122 443.4 419 48.7
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 4.0e-119 432.6 418 51.0
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 9.8e-118 427.9 417 52.3
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.0e-115 420.2 399 50.9
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 4.6e-115 419.1 460 48.5
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.0e-114 417.9 443 48.5
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.0e-114 415.6 419 50.1
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.6e-112 410.6 441 49.0
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.1e-111 407.9 333 58.9
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 7.0e-108 395.2 438 48.2
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 1.6e-107 394.0 429 45.9
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 1.6e-107 394.0 413 47.7
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 6.2e-104 382.1 450 46.2
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 3.7e-101 372.9 351 53.8
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 2.1e-99 367.1 347 51.9
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 3.3e-97 359.8 440 44.1
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.2e-96 357.8 328 52.7
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.6e-96 357.5 328 52.4
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 9.9e-94 348.2 317 52.7
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 7.8e-91 338.6 405 44.2
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.7e-90 335.1 381 45.9
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-89 334.7 401 44.4
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.4e-84 317.0 235 63.8
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 2.4e-76 290.4 223 59.6
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 1.1e-63 248.4 248 49.6
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 3.3e-57 226.9 464 33.2
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 2.0e-54 217.6 247 47.4
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 5.3e-47 193.0 197 46.7
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 7.4e-41 172.6 391 31.5
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.4e-39 167.5 131 61.8
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.4e-39 167.5 131 61.8
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 4.8e-32 143.3 165 44.8
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.0e-29 135.6 181 39.8
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 5.0e-21 106.7 63 74.6
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 1.1e-20 105.5 132 40.9
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.6e-19 101.7 89 55.1
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.1e-15 85.9 140 35.7
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.1e-15 85.9 140 35.7
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 7.7e-14 82.8 127 39.4
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 1.1e-12 79.0 197 31.5
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 3.3e-12 77.4 198 29.8
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 4.7e-11 73.6 228 30.3
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 6.1e-11 73.2 72 52.8
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 6.8e-10 69.7 223 26.9
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.7e-08 65.1 75 45.3
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 3.5e-06 57.4 77 42.9


User provided reference genes

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