Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 3.0e-93 345.1 167 100.0
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.0e-48 197.2 185 62.7
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 8.2e-27 124.4 194 40.7
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.1e-26 124.0 185 42.2
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.1e-26 124.0 185 42.2
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.4e-26 123.6 168 44.0
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 4.1e-26 122.1 168 43.5
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 4.1e-26 122.1 169 42.0
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 2.0e-25 119.8 168 40.5
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.6e-25 119.4 168 40.5
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 4.5e-25 118.6 169 41.4
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 4.5e-25 118.6 168 41.1
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 4.5e-25 118.6 168 41.7
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.9e-25 118.2 178 39.3
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.9e-25 118.2 178 39.9
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 7.7e-25 117.9 192 38.0
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 1.0e-24 117.5 169 41.4
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 1.0e-24 117.5 167 41.9
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.0e-24 117.5 168 40.5
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.3e-24 117.1 192 38.5
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 1.3e-24 117.1 168 41.7
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.3e-24 117.1 168 39.9
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.3e-24 117.1 168 41.1
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.7e-24 116.7 168 41.1
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 1.7e-24 116.7 168 39.9
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 2.2e-24 116.3 168 40.5
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 2.2e-24 116.3 168 39.9
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 2.9e-24 115.9 168 40.5
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 2.9e-24 115.9 179 39.7
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 2.9e-24 115.9 168 39.3
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 3.8e-24 115.5 168 39.9
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 5.0e-24 115.2 202 38.1
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 6.5e-24 114.8 171 38.6
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 6.5e-24 114.8 168 40.5
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 8.5e-24 114.4 168 39.9
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 8.5e-24 114.4 168 40.5
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.1e-23 114.0 168 39.9
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.4e-23 113.6 169 39.6
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.4e-23 113.6 150 42.7
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.9e-23 113.2 189 38.6
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 1.9e-23 113.2 168 39.9
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 1.9e-23 113.2 168 38.1
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 1.9e-23 113.2 168 39.3
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.9e-23 113.2 169 39.6
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 1.9e-23 113.2 168 38.7
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 1.9e-23 113.2 168 41.1
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 2.5e-23 112.8 161 40.4
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 2.5e-23 112.8 168 41.1
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 2.5e-23 112.8 161 41.0
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 3.2e-23 112.5 172 39.0
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 3.2e-23 112.5 168 38.7
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 3.2e-23 112.5 168 40.5
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 4.2e-23 112.1 168 40.5
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 4.2e-23 112.1 168 38.7
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 5.5e-23 111.7 189 37.6
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 5.5e-23 111.7 189 37.6
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 7.2e-23 111.3 161 39.8
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 7.2e-23 111.3 167 39.5
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 7.2e-23 111.3 170 38.8
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 7.2e-23 111.3 168 38.1
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 7.2e-23 111.3 168 38.7
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 7.2e-23 111.3 168 38.7
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 9.4e-23 110.9 167 38.9
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 9.4e-23 110.9 167 38.9
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 9.4e-23 110.9 167 39.5
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.2e-22 110.5 168 38.7
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 1.6e-22 110.2 167 39.5
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 3.6e-22 109.0 191 38.2
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 3.6e-22 109.0 167 38.9
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 3.6e-22 109.0 168 37.5
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 6.1e-22 108.2 168 40.5
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 1.0e-21 107.5 156 41.7
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.0e-21 107.5 168 39.3
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.8e-21 106.7 168 37.5
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 3.0e-21 105.9 167 38.3
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 8.8e-21 104.4 203 34.0
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 1.1e-20 104.0 147 39.5
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.1e-20 104.0 167 37.7
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 1.5e-20 103.6 150 38.0
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 8.2e-19 97.8 164 36.0
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.4e-18 97.1 137 39.4
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 4.1e-18 95.5 186 31.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 5.3e-18 95.1 153 39.2
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 9.1e-18 94.4 103 50.5
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.6e-17 93.6 164 36.6
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 2.0e-17 93.2 112 40.2
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.6e-17 92.8 206 31.6
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.5e-17 92.4 181 34.3
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 3.2e-15 85.9 159 35.2
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 3.6e-14 82.4 150 34.0
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 3.7e-11 72.4 48 66.7
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 2.4e-10 69.7 163 30.1
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.6e-09 67.0 48 60.4
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 5.9e-09 65.1 139 31.7
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.9e-08 62.8 146 29.5
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 6.5e-08 61.6 95 41.1
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 6.5e-08 61.6 47 57.4


User provided reference genes

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