Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 2.5e-98 362.1 181 100.0
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 1.4e-27 127.1 118 55.9
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 9.5e-21 104.4 119 44.5
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 2.0e-18 96.7 84 54.8
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 3.9e-14 82.4 132 39.4
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 5.1e-14 82.0 125 37.6
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 6.6e-14 81.6 99 44.4
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 8.6e-14 81.3 111 41.4
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 8.6e-14 81.3 102 46.1
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 8.6e-14 81.3 108 39.8
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.1e-13 80.9 133 41.4
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.1e-13 80.9 133 41.4
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 1.1e-13 80.9 127 40.9
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 1.9e-13 80.1 130 36.2
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 1.9e-13 80.1 130 39.2
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 2.5e-13 79.7 121 38.0
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 2.5e-13 79.7 128 36.7
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 2.5e-13 79.7 93 44.1
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 2.5e-13 79.7 104 43.3
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 3.3e-13 79.3 131 37.4
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 4.3e-13 79.0 108 40.7
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 4.3e-13 79.0 108 40.7
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 4.3e-13 79.0 96 42.7
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 4.3e-13 79.0 114 38.6
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 4.3e-13 79.0 129 38.0
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 5.6e-13 78.6 113 41.6
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 5.6e-13 78.6 108 38.9
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 5.6e-13 78.6 105 43.8
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 5.6e-13 78.6 127 38.6
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 7.3e-13 78.2 109 42.2
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 7.3e-13 78.2 100 43.0
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 9.6e-13 77.8 100 43.0
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 9.6e-13 77.8 108 42.6
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 9.6e-13 77.8 107 41.1
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 1.2e-12 77.4 93 43.0
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.2e-12 77.4 112 41.1
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 1.2e-12 77.4 101 38.6
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.6e-12 77.0 111 41.4
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.6e-12 77.0 136 37.5
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 2.1e-12 76.6 102 43.1
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 2.8e-12 76.3 138 37.7
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 3.6e-12 75.9 107 39.3
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 3.6e-12 75.9 131 37.4
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 3.6e-12 75.9 108 41.7
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 3.6e-12 75.9 100 41.0
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 3.6e-12 75.9 105 41.9
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 3.6e-12 75.9 127 37.8
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 4.7e-12 75.5 95 43.2
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 4.7e-12 75.5 101 40.6
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 4.7e-12 75.5 109 38.5
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 4.7e-12 75.5 93 43.0
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 4.7e-12 75.5 96 41.7
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 6.2e-12 75.1 92 45.7
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 6.2e-12 75.1 124 40.3
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 6.2e-12 75.1 96 39.6
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 8.1e-12 74.7 98 41.8
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 8.1e-12 74.7 98 41.8
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 8.1e-12 74.7 98 41.8
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 1.1e-11 74.3 99 42.4
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 1.1e-11 74.3 111 37.8
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.4e-11 73.9 101 40.6
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 1.4e-11 73.9 94 39.4
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 1.8e-11 73.6 97 42.3
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.8e-11 73.6 96 44.8
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.8e-11 73.6 96 44.8
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.8e-11 73.6 96 44.8
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 2.4e-11 73.2 109 39.4
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 3.1e-11 72.8 124 39.5
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 3.1e-11 72.8 92 44.6
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 4.0e-11 72.4 91 46.2
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 4.0e-11 72.4 96 39.6
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 5.2e-11 72.0 80 43.8
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 6.8e-11 71.6 95 41.1
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 6.8e-11 71.6 122 36.9
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 6.8e-11 71.6 92 42.4
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 8.9e-11 71.2 92 41.3
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.2e-10 70.9 92 42.4
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.2e-10 70.9 83 41.0
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 1.2e-10 70.9 98 42.9
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.2e-10 70.9 103 39.8
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 2.6e-10 69.7 108 39.8
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 2.6e-10 69.7 92 41.3
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 2.6e-10 69.7 111 36.0
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 2.6e-10 69.7 127 37.8
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 3.4e-10 69.3 90 43.3
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 5.8e-10 68.6 94 42.6
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 5.8e-10 68.6 94 37.2
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 5.8e-10 68.6 95 40.0
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 5.8e-10 68.6 118 34.7
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 9.9e-10 67.8 77 42.9
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 9.9e-10 67.8 77 42.9
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 9.9e-10 67.8 110 35.5
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 1.1e-08 64.3 76 42.1
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.4e-08 63.2 72 44.4
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 7.1e-08 61.6 83 38.6
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 2.7e-07 59.7 82 37.8
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 1.3e-06 57.4 78 38.5


User provided reference genes

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