Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 3.8e-174 614.8 318 100.0
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 8.4e-81 304.7 257 63.4
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 3.2e-80 302.8 275 59.6
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 3.2e-80 302.8 221 71.0
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 3.2e-80 302.8 221 71.0
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 5.5e-80 302.0 220 70.5
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.2e-79 300.8 208 70.7
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 2.7e-79 299.7 212 72.2
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 6.0e-79 298.5 222 70.3
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 6.0e-79 298.5 222 70.3
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 6.0e-79 298.5 271 62.7
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 6.0e-79 298.5 220 69.5
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 7.9e-79 298.1 222 67.6
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 7.9e-79 298.1 221 68.8
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.0e-78 297.7 224 69.2
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.8e-78 297.0 224 67.0
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 1.8e-78 297.0 221 69.2
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.3e-78 296.6 205 73.2
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 3.0e-78 296.2 276 58.0
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 3.0e-78 296.2 215 70.7
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.0e-78 296.2 201 74.1
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 3.0e-78 296.2 221 67.9
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 3.0e-78 296.2 221 68.3
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 3.0e-78 296.2 221 68.8
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.9e-78 295.8 226 69.0
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 3.9e-78 295.8 221 67.4
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 3.9e-78 295.8 221 69.2
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 3.9e-78 295.8 222 68.0
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 5.1e-78 295.4 220 68.2
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 5.1e-78 295.4 220 68.6
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 6.7e-78 295.0 273 58.6
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 6.7e-78 295.0 223 67.3
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 8.7e-78 294.7 273 58.2
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 8.7e-78 294.7 237 65.0
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.1e-77 294.3 215 70.2
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.1e-77 294.3 227 66.1
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 2.5e-77 293.1 244 63.9
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 2.5e-77 293.1 300 55.0
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 4.3e-77 292.4 220 67.7
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 5.7e-77 292.0 222 65.8
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 5.7e-77 292.0 229 63.8
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 7.4e-77 291.6 219 67.6
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 7.4e-77 291.6 202 72.3
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 7.4e-77 291.6 221 67.9
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 9.7e-77 291.2 283 56.2
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 9.7e-77 291.2 217 68.2
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 1.3e-76 290.8 273 58.6
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 1.6e-76 290.4 223 67.3
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 1.6e-76 290.4 223 67.3
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 1.6e-76 290.4 223 67.3
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 1.6e-76 290.4 223 67.3
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 2.8e-76 289.7 222 68.0
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 2.8e-76 289.7 219 67.6
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 3.7e-76 289.3 210 70.0
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 4.8e-76 288.9 224 64.7
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 4.8e-76 288.9 230 67.0
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 8.2e-76 288.1 235 63.4
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 8.2e-76 288.1 224 65.2
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.1e-75 287.7 264 60.2
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 1.1e-75 287.7 221 66.5
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 1.4e-75 287.3 263 59.3
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.8e-75 287.0 226 65.9
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 3.1e-75 286.2 221 65.2
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 4.1e-75 285.8 210 69.0
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 4.1e-75 285.8 253 59.7
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 4.1e-75 285.8 221 64.7
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 4.1e-75 285.8 231 65.8
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 5.3e-75 285.4 221 65.6
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 5.3e-75 285.4 221 65.6
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 5.3e-75 285.4 221 65.6
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 9.0e-75 284.6 220 66.8
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.5e-74 283.9 221 65.6
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.6e-74 283.1 221 65.2
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 3.4e-74 282.7 243 60.9
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 3.4e-74 282.7 221 64.3
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 5.9e-74 282.0 236 61.4
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 5.9e-74 282.0 202 69.3
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 7.7e-74 281.6 220 67.3
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 7.7e-74 281.6 208 67.3
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.3e-73 280.8 202 67.8
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 1.7e-73 280.4 241 62.7
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 2.2e-73 280.0 205 71.2
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 2.2e-73 280.0 210 68.6
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 2.2e-73 280.0 297 54.2
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 6.5e-73 278.5 263 57.0
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 8.5e-73 278.1 195 70.8
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 1.4e-72 277.3 220 64.5
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 1.9e-72 276.9 190 70.5
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 1.9e-72 276.9 231 63.2
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 3.2e-72 276.2 220 65.0
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 3.2e-72 276.2 218 66.5
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 4.2e-72 275.8 218 65.1
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 4.2e-72 275.8 202 66.8
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 4.2e-72 275.8 213 65.3
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 5.5e-72 275.4 225 63.1
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 2.7e-71 273.1 201 68.7
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 6.1e-71 271.9 252 59.1
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 3.0e-70 269.6 192 68.8
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 3.7e-68 262.7 185 71.4
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 1.4e-67 260.8 229 60.7
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 7.7e-66 255.0 209 61.2
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 3.8e-65 252.7 292 48.6
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.2e-63 247.7 269 49.4
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 2.1e-63 246.9 178 71.3
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 2.3e-62 243.4 213 61.0
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 7.4e-61 238.4 200 57.5
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.0e-53 213.8 167 66.5
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 4.4e-53 212.6 157 68.8
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 9.7e-53 211.5 152 71.1
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.7e-52 210.7 193 53.4
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 7.7e-50 201.8 204 51.5
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 7.7e-50 201.8 154 68.8
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 8.0e-47 191.8 162 59.3
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 1.4e-46 191.0 159 59.1
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 8.3e-44 181.8 141 65.2
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 2.7e-42 176.8 114 74.6
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.2e-41 173.7 116 71.6
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.8e-35 154.1 221 42.1
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 9.8e-29 131.7 120 58.3
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.0e-19 99.0 116 46.6
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 4.6e-18 96.3 73 63.0
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 2.3e-06 57.4 58 56.9


User provided reference genes

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