Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 1.2e-129 466.5 233 100.0
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 8.2e-49 198.0 238 49.6
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 2.8e-25 119.8 191 40.3
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 3.2e-21 106.3 215 33.5
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 1.6e-20 104.0 179 37.4
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 5.3e-16 89.0 198 32.8
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.0e-15 87.0 180 30.6
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 3.5e-15 86.3 180 30.0
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 1.7e-14 84.0 192 29.7
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 2.2e-14 83.6 177 29.9
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.2e-14 83.6 180 28.9
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 2.2e-14 83.6 176 33.0
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 2.9e-14 83.2 182 31.3
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 3.8e-14 82.8 179 30.7
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 5.0e-14 82.4 182 29.7
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 6.5e-14 82.0 171 29.2
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 6.5e-14 82.0 177 29.9
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 6.5e-14 82.0 211 30.8
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 1.1e-13 81.3 208 28.8
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 1.5e-13 80.9 176 30.1
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.5e-13 80.9 211 26.1
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.9e-13 80.5 179 29.1
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 1.9e-13 80.5 177 29.9
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 1.9e-13 80.5 178 33.1
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 3.2e-13 79.7 208 28.4
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 3.2e-13 79.7 177 28.2
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 4.2e-13 79.3 179 30.2
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 4.2e-13 79.3 177 28.8
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 5.5e-13 79.0 174 29.9
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 5.5e-13 79.0 172 29.1
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 7.2e-13 78.6 208 27.9
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 7.2e-13 78.6 175 31.4
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 7.2e-13 78.6 176 32.4
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 9.4e-13 78.2 213 28.6
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 1.2e-12 77.8 191 28.3
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 1.6e-12 77.4 175 30.3
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 2.1e-12 77.0 181 28.7
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.1e-12 77.0 213 28.2
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 3.6e-12 76.3 174 29.3
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 4.7e-12 75.9 174 29.3
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 4.7e-12 75.9 193 28.0
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 6.1e-12 75.5 170 29.4
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 6.1e-12 75.5 216 29.6
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 6.1e-12 75.5 178 28.1
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 8.0e-12 75.1 207 27.1
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 8.0e-12 75.1 183 28.4
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 8.0e-12 75.1 217 28.1
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.0e-11 74.7 181 26.0
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.4e-11 74.3 173 30.6
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 1.4e-11 74.3 179 28.5
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 2.3e-11 73.6 177 28.2
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 3.0e-11 73.2 172 29.1
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 3.0e-11 73.2 176 30.1
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 3.0e-11 73.2 206 29.1
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 4.0e-11 72.8 175 29.7
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 5.2e-11 72.4 181 28.7
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 5.2e-11 72.4 176 26.1
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 6.7e-11 72.0 173 26.6
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 6.7e-11 72.0 225 27.1
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 1.2e-10 71.2 173 26.0
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 1.2e-10 71.2 217 28.1
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 1.5e-10 70.9 210 29.0
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 2.0e-10 70.5 176 25.6
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 2.6e-10 70.1 175 26.9
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 3.3e-10 69.7 179 30.2
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 4.4e-10 69.3 176 26.1
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 9.7e-10 68.2 167 28.1
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 1.3e-09 67.8 172 27.3
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 1.3e-09 67.8 176 29.0
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 2.8e-09 66.6 187 26.7
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 3.7e-09 66.2 184 26.6
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 4.8e-09 65.9 184 27.7
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 4.8e-09 65.9 167 27.5
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 4.8e-09 65.9 189 25.9
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 6.3e-09 65.5 183 26.2
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 1.4e-08 64.3 182 30.8
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 4.1e-08 62.8 175 26.9
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 5.3e-08 62.4 172 26.7
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 9.1e-08 61.6 171 26.9
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 7.7e-07 58.5 181 30.4
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 1.0e-06 58.2 174 27.0
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 5.0e-06 55.8 210 25.7


User provided reference genes

Program Settings