Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 9.6e-98 360.1 181 100.0
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 7.7e-47 191.0 138 71.7
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 3.1e-40 169.1 160 54.4
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 7.0e-40 167.9 176 52.8
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 1.4e-35 153.7 162 46.9
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 2.0e-34 149.8 123 59.3
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.1e-32 144.1 161 48.4
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 4.1e-32 142.1 137 51.1
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 5.4e-32 141.7 152 49.3
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 9.2e-32 141.0 185 45.4
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 2.7e-31 139.4 161 47.8
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 7.8e-31 137.9 174 46.0
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.0e-30 137.5 178 44.9
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 1.7e-30 136.7 161 46.6
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 1.7e-30 136.7 162 46.3
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 2.3e-30 136.3 172 45.3
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 5.0e-30 135.2 161 46.0
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 5.0e-30 135.2 140 50.0
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 5.0e-30 135.2 163 44.8
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 5.0e-30 135.2 136 48.5
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 5.0e-30 135.2 138 47.1
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 8.6e-30 134.4 161 44.7
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.1e-29 134.0 172 45.3
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.5e-29 133.7 161 46.0
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.9e-29 133.3 161 44.7
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.9e-29 133.3 172 44.8
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 2.5e-29 132.9 163 45.4
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 2.5e-29 132.9 161 44.7
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 2.5e-29 132.9 161 46.0
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 3.3e-29 132.5 141 48.2
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 4.3e-29 132.1 161 45.3
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 5.6e-29 131.7 161 44.7
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 5.6e-29 131.7 189 41.3
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 5.6e-29 131.7 132 50.8
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 5.6e-29 131.7 132 50.0
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 7.3e-29 131.3 165 44.2
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.2e-28 130.6 120 51.7
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.2e-28 130.6 172 44.2
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 1.2e-28 130.6 184 42.9
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 1.6e-28 130.2 161 44.7
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 2.1e-28 129.8 120 50.0
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 2.1e-28 129.8 137 48.9
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 2.8e-28 129.4 158 44.9
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 2.8e-28 129.4 161 42.9
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 2.8e-28 129.4 161 42.9
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 2.8e-28 129.4 172 43.0
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 2.8e-28 129.4 120 51.7
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 3.6e-28 129.0 161 43.5
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 3.6e-28 129.0 161 43.5
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 3.6e-28 129.0 161 43.5
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 3.6e-28 129.0 161 44.7
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 3.6e-28 129.0 156 46.2
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 3.6e-28 129.0 159 45.3
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 4.7e-28 128.6 174 42.0
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 6.2e-28 128.3 184 42.9
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 8.0e-28 127.9 161 44.1
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 8.0e-28 127.9 119 49.6
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 8.0e-28 127.9 161 44.1
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 8.0e-28 127.9 161 44.1
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 8.0e-28 127.9 161 44.1
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.1e-27 127.5 118 50.0
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 1.1e-27 127.5 174 44.3
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.1e-27 127.5 120 51.7
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 1.1e-27 127.5 120 52.5
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.4e-27 127.1 124 50.8
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.4e-27 127.1 120 52.5
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.4e-27 127.1 119 51.3
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.8e-27 126.7 161 44.1
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 1.8e-27 126.7 124 50.8
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.8e-27 126.7 124 50.8
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.8e-27 126.7 124 50.8
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.8e-27 126.7 124 50.8
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.8e-27 126.7 161 43.5
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 2.3e-27 126.3 161 42.2
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 4.0e-27 125.6 160 43.1
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 5.2e-27 125.2 137 46.7
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 6.8e-27 124.8 161 43.5
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 8.9e-27 124.4 137 45.3
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 8.9e-27 124.4 120 50.8
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.5e-26 123.6 120 51.7
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 3.4e-26 122.5 137 45.3
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 4.4e-26 122.1 164 42.1
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 5.8e-26 121.7 184 41.8
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 5.8e-26 121.7 118 49.2
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 9.8e-26 120.9 161 42.9
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 9.8e-26 120.9 143 46.2
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 9.8e-26 120.9 126 46.8
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 9.8e-26 120.9 120 48.3
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.3e-25 120.6 120 48.3
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.3e-25 120.6 120 48.3
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 2.9e-25 119.4 168 42.3
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 2.9e-25 119.4 129 46.5
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.7e-25 119.0 130 48.5
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.1e-24 117.5 154 43.5
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 5.4e-24 115.2 120 50.8
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 7.0e-24 114.8 160 41.9
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.3e-22 110.5 154 40.3
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 2.5e-21 106.3 120 45.8
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 4.3e-21 105.5 224 33.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 2.8e-20 102.8 120 44.2
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 8.9e-19 97.8 128 40.6
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 5.8e-18 95.1 99 50.5
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 4.9e-17 92.0 173 37.6
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 8.3e-17 91.3 150 38.7
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.1e-16 90.9 132 42.4
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.9e-16 90.1 109 42.2
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 1.6e-15 87.0 89 43.8
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 3.5e-15 85.9 85 51.8
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 5.1e-14 82.0 80 51.2
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 8.9e-11 71.2 132 34.1
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 1.2e-10 70.9 118 34.7
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 2.9e-09 66.2 105 31.4
Cre17.g696200 Chlamydomonas reinhardtii HOM05D006513 ORTHO05D008150 7.8e-07 58.2 131 26.0
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 2.3e-06 56.6 46 54.3
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 3.9e-06 55.8 82 42.7


User provided reference genes

Program Settings