Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_2300 Physcomitrium patens HOM05D003016 ORTHO05D309912 3.2e-53 211.5 105 100.0
Pp3c2_12940 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.1e-32 143.3 103 67.0
Pp3c2_12950 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.1e-32 143.3 103 67.0
Pp3c15_960 Physcomitrium patens HOM05D003016 ORTHO05D000239 5.3e-32 141.0 103 63.1
Pp3c6_5450 Physcomitrium patens HOM05D003016 ORTHO05D000239 7.7e-31 137.1 103 64.1
Pp3c6_8150 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.0e-30 136.7 103 66.0
Pp3c6_11870 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.3e-30 136.3 103 64.1
Pp3c15_16800 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.9e-29 132.5 103 62.1
Pp3c9_10230 Physcomitrium patens HOM05D003016 ORTHO05D311455 5.5e-29 131.0 103 61.2
Pp3c6_5930 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.2e-28 129.8 103 60.2
Pp3c15_2320 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.6e-28 129.4 102 61.8
Pp3c20_15960 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.1e-28 129.0 103 64.1
Pp3c2_13120 Physcomitrium patens HOM05D003016 ORTHO05D000239 3.7e-25 118.2 103 59.2
Pp3c12_3810 Physcomitrium patens HOM05D003016 ORTHO05D313243 1.3e-22 109.8 97 57.7
Pp3c7_21000 Physcomitrium patens HOM05D003016 ORTHO05D317923 6.5e-22 107.5 104 55.8
Pp3c6_5920 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.9e-21 105.9 103 51.5
Pp3c20_20770 Physcomitrium patens HOM05D003016 ORTHO05D009718 5.5e-21 104.4 84 61.9
Pp3c9_16400 Physcomitrium patens HOM05D003016 ORTHO05D000239 2.1e-20 102.4 103 51.5
Pp3c18_4910 Physcomitrium patens HOM05D003016 ORTHO05D313515 8.0e-20 100.5 104 52.9
Pp3c13_15200 Physcomitrium patens HOM05D003016 ORTHO05D009718 5.2e-19 97.8 103 47.6
Pp3c18_4530 Physcomitrium patens HOM05D003016 ORTHO05D009718 8.8e-19 97.1 103 44.7
Pp3c13_21290 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.2e-18 96.7 103 47.6
Pp3c13_2900 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.2e-18 96.7 104 46.2
Pp3c13_2910 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.2e-18 96.7 104 46.2
Pp3c11_21080 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.5e-18 96.3 95 49.5
Pp3c20_20760 Physcomitrium patens HOM05D003016 ORTHO05D000239 2.6e-18 95.5 75 62.7
Pp3c16_23160 Physcomitrium patens HOM05D003016 ORTHO05D009718 3.4e-18 95.1 103 45.6
Pp3c13_15270 Physcomitrium patens HOM05D003016 ORTHO05D009718 4.4e-18 94.7 103 45.6
Pp3c13_19900 Physcomitrium patens HOM05D003016 ORTHO05D000239 4.4e-18 94.7 103 47.6
Pp3c14_1111 Physcomitrium patens HOM05D003016 ORTHO05D009718 9.8e-18 93.6 103 46.6
Pp3c13_3150 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.7e-17 92.8 103 44.7
Pp3c20_22019 Physcomitrium patens HOM05D003016 ORTHO05D318622 2.2e-17 92.4 104 46.2
Pp3c21_15570 Physcomitrium patens HOM05D003016 ORTHO05D009718 6.3e-17 90.9 103 42.7
Pp3c17_21730 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.4e-16 89.0 103 40.8
Pp3c17_21740 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.4e-16 89.0 103 40.8
Pp3c17_20870 Physcomitrium patens HOM05D003016 ORTHO05D009718 4.1e-16 88.2 103 40.8
Pp3c17_20880 Physcomitrium patens HOM05D003016 ORTHO05D009718 4.1e-16 88.2 103 40.8
Pp3c21_6260 Physcomitrium patens HOM05D003016 ORTHO05D000239 9.1e-16 87.0 95 49.5
Pp3c18_2880 Physcomitrium patens HOM05D003016 ORTHO05D009718 2.0e-15 85.9 103 43.7
Pp3c13_21810 Physcomitrium patens HOM05D003016 ORTHO05D000239 3.5e-15 85.1 103 41.7
Pp3c11_3280 Physcomitrium patens HOM05D003016 ORTHO05D314275 5.9e-15 84.3 103 42.7
Pp3c7_21880 Physcomitrium patens HOM05D003016 ORTHO05D312108 7.7e-15 84.0 108 41.7
Pp3c6_5610 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.0e-14 83.6 104 46.2
Pp3c21_18280 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.3e-14 83.2 103 39.8
Pp3c14_13230 Physcomitrium patens HOM05D003016 ORTHO05D312549 1.7e-14 82.8 103 41.7
Pp3c13_22110 Physcomitrium patens HOM05D003016 ORTHO05D316010 3.8e-14 81.6 103 37.9
Pp3c26_2480 Physcomitrium patens HOM05D003016 ORTHO05D309986 3.8e-14 81.6 63 55.6
Pp3c18_2410 Physcomitrium patens HOM05D003016 ORTHO05D009718 5.0e-14 81.3 99 41.4
Pp3c13_2610 Physcomitrium patens HOM05D003016 ORTHO05D009718 8.5e-14 80.5 103 38.8
Pp3c8_2020 Physcomitrium patens HOM05D003016 ORTHO05D310070 1.1e-13 80.1 98 43.9
Pp3c20_21210 Physcomitrium patens HOM05D003016 ORTHO05D000239 5.5e-13 77.8 103 39.8
Pp3c8_2150 Physcomitrium patens HOM05D003016 ORTHO05D009718 5.5e-13 77.8 103 40.8
Pp3c17_14980 Physcomitrium patens HOM05D003016 ORTHO05D318893 7.2e-13 77.4 91 48.4
Pp3c13_21690 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.6e-12 76.3 85 44.7
Pp3c6_6000 Physcomitrium patens HOM05D003016 ORTHO05D318268 1.6e-12 76.3 56 60.7
Pp3c8_17870 Physcomitrium patens HOM05D003016 ORTHO05D314585 1.6e-12 76.3 104 42.3
Pp3c17_8750 Physcomitrium patens HOM05D003016 ORTHO05D000239 6.1e-12 74.3 103 35.9
Pp3c20_15850 Physcomitrium patens HOM05D003016 ORTHO05D000239 8.0e-12 73.9 77 51.9
Pp3c14_6750 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.0e-11 73.6 103 41.7
Pp3c21_3920 Physcomitrium patens HOM05D003016 ORTHO05D000239 1.4e-11 73.2 103 42.7
Pp3c21_8750 Physcomitrium patens HOM05D003016 ORTHO05D009718 8.8e-11 70.5 103 35.9
Pp3c21_8760 Physcomitrium patens HOM05D003016 ORTHO05D000239 8.8e-11 70.5 103 35.9
Pp3c20_21220 Physcomitrium patens HOM05D003016 ORTHO05D009718 1.5e-10 69.7 102 37.3
Pp3c9_24950 Physcomitrium patens HOM05D003016 ORTHO05D318563 2.8e-09 65.5 104 32.7
TPR.G34804 Trifolium pratense HOM05D000011 ORTHO05D000157 1.8e-08 62.8 109 35.8
Pp3c3_11530 Physcomitrium patens HOM05D003016 ORTHO05D318603 2.4e-08 62.4 103 35.9
Pp3c6_5620 Physcomitrium patens HOM05D003016 ORTHO05D310275 4.1e-08 61.6 104 37.5
Pp3c6_12460 Physcomitrium patens HOM05D003016 ORTHO05D310406 9.2e-08 60.5 94 35.1
Pp3c11_23790 Physcomitrium patens HOM05D003016 ORTHO05D308650 1.2e-07 60.1 47 57.4
Medtr3g056200 Medicago truncatula HOM05D000011 ORTHO05D000157 4.5e-07 58.2 109 33.0
Pp3c17_230 Physcomitrium patens HOM05D003016 ORTHO05D313522 4.5e-07 58.2 42 64.3
Pp3c21_14710 Physcomitrium patens HOM05D003016 ORTHO05D316218 5.9e-07 57.8 105 33.3
Phvul.004G008101 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.0e-06 57.0 105 32.4
Medtr3g070590 Medicago truncatula HOM05D000009 ORTHO05D000008 1.3e-06 56.6 106 34.0
Phvul.004G036800 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.3e-06 56.6 104 32.7
Medtr3g071070 Medicago truncatula HOM05D000009 ORTHO05D000008 2.3e-06 55.8 106 34.0
Medtr3g071130 Medicago truncatula HOM05D000009 ORTHO05D000008 2.3e-06 55.8 106 34.0
Phvul.004G005600 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.3e-06 55.8 105 33.3
Phvul.004G007900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.3e-06 55.8 105 32.4
Pp3c25_5920 Physcomitrium patens HOM05D003016 ORTHO05D308189 2.9e-06 55.5 95 30.5
Manes.11G004600 Manihot esculenta HOM05D000009 ORTHO05D000008 3.8e-06 55.1 105 37.1
Phvul.004G009154 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.8e-06 55.1 105 33.3
Potri.T126806 Populus trichocarpa HOM05D000009 ORTHO05D000008 3.8e-06 55.1 104 33.7
Eucgr.J01303 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.0e-06 54.7 105 35.2
Phvul.004G008680 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 6.6e-06 54.3 105 31.4
Phvul.010G025000 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 6.6e-06 54.3 109 32.1
Eucgr.H01027 Eucalyptus grandis HOM05D000009 ORTHO05D000008 8.6e-06 53.9 105 35.2
Phvul.004G009281 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 8.6e-06 53.9 105 31.4
Phvul.011G197400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 8.6e-06 53.9 105 35.2


User provided reference genes

Program Settings