Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_2110 Physcomitrium patens HOM05D006909 ORTHO05D008682 8.9e-125 450.3 228 100.0
Pp3c18_13100 Physcomitrium patens HOM05D006909 ORTHO05D008682 1.1e-90 337.0 201 88.6
Pp3c21_4250 Physcomitrium patens HOM05D006909 ORTHO05D008682 1.1e-58 230.7 201 62.7
Mapoly0080s0075 Marchantia polymorpha HOM05D006909 ORTHO05D008682 4.4e-23 112.5 144 44.4
Actinidia25726 Actinidia chinensis HOM05D006909 ORTHO05D008682 8.1e-17 91.7 114 39.5
Glyma.17G200700 Glycine max HOM05D006909 ORTHO05D008682 1.8e-16 90.5 120 40.0
Oeu027782.1 Olea europaea HOM05D006909 ORTHO05D008682 3.1e-16 89.7 119 41.2
CSS0024909 Camellia sinensis var. sinensis HOM05D006909 ORTHO05D008682 4.0e-16 89.4 119 38.7
Haze_21677 Corylus avellana HOM05D006909 ORTHO05D008682 4.0e-16 89.4 111 42.3
ATR0626G002 Amborella trichopoda HOM05D006909 ORTHO05D008682 5.2e-16 89.0 151 36.4
Glyma.11G174701 Glycine max HOM05D006909 ORTHO05D008682 5.2e-16 89.0 120 39.2
CiPaw.07G215300 Carya illinoinensis HOM05D006909 ORTHO05D008682 6.8e-16 88.6 111 40.5
Prupe.1G463100 Prunus persica HOM05D006909 ORTHO05D008682 6.8e-16 88.6 137 38.0
QL12p024608 Quercus lobata HOM05D006909 ORTHO05D008682 6.8e-16 88.6 162 32.7
Cc01_g06550 Coffea canephora HOM05D006909 ORTHO05D008682 8.9e-16 88.2 116 39.7
RcHm_v2.0_Chr4g0410411 Rosa chinensis HOM05D006909 ORTHO05D008682 8.9e-16 88.2 112 42.0
Lalb_Chr24g0402391 Lupinus albus HOM05D006909 ORTHO05D008682 2.0e-15 87.0 125 40.0
AagrBONN_evm.TU.Sc2ySwM_228.2691 Anthoceros agrestis HOM05D002736 ORTHO05D003882 2.6e-15 86.7 137 38.0
Glyma.14G132000 Glycine max HOM05D006909 ORTHO05D008682 3.4e-15 86.3 117 38.5
HanXRQChr06g0174091 Helianthus annuus HOM05D006909 ORTHO05D008682 3.4e-15 86.3 119 42.0
FvH4_4g12330 Fragaria vesca HOM05D006909 ORTHO05D008682 4.4e-15 85.9 111 41.4
FAN12G0257 Fragaria x ananassa HOM05D006909 ORTHO05D008682 4.4e-15 85.9 111 41.4
FAN12G1566 Fragaria x ananassa HOM05D006909 ORTHO05D008682 4.4e-15 85.9 111 41.4
Phvul.001G088800 Phaseolus vulgaris HOM05D006909 ORTHO05D008682 4.4e-15 85.9 117 38.5
Psat6g031680 Pisum sativum HOM05D006909 ORTHO05D008682 4.4e-15 85.9 122 40.2
VMungo1383G0586 Vigna mungo HOM05D006909 ORTHO05D008682 4.4e-15 85.9 117 38.5
Manes.02G165700 Manihot esculenta HOM05D006909 ORTHO05D008682 5.8e-15 85.5 104 43.3
Medtr1g010080 Medicago truncatula HOM05D006909 ORTHO05D008682 5.8e-15 85.5 125 38.4
SalBow4G1645 Salvia bowleyana HOM05D006909 ORTHO05D008682 5.8e-15 85.5 118 38.1
HPP92_015785 Vanilla planifolia HOM05D006909 ORTHO05D008682 5.8e-15 85.5 138 34.8
Ciclev10009318m.g Citrus clementina HOM05D006909 ORTHO05D008682 7.5e-15 85.1 122 39.3
Cfa013243 Carpinus fangiana HOM05D006909 ORTHO05D008682 9.8e-15 84.7 121 38.0
CBR_g8618 Chara braunii HOM05D006909 ORTHO05D008682 9.8e-15 84.7 111 45.9
FAN07G1520 Fragaria x ananassa HOM05D006909 ORTHO05D008682 9.8e-15 84.7 110 41.8
Lj8A414G13 Lonicera japonica HOM05D006909 ORTHO05D008682 9.8e-15 84.7 118 37.3
Atru.chr7.2714 Acer truncatum HOM05D006909 ORTHO05D008682 1.7e-14 84.0 89 47.2
MSTRG.25805 Avicennia marina HOM05D006909 ORTHO05D008682 1.7e-14 84.0 118 35.6
Peaxi162Scf00213g01514 Petunia axillaris HOM05D006909 ORTHO05D008682 1.7e-14 84.0 119 40.3
TAR383G0789 Trochodendron aralioides HOM05D006909 ORTHO05D008682 1.7e-14 84.0 116 37.9
SalBow8G2968 Salvia bowleyana HOM05D006909 ORTHO05D008682 2.2e-14 83.6 140 34.3
vmacro09260 Vaccinium macrocarpon HOM05D006909 ORTHO05D008682 2.2e-14 83.6 118 38.1
vmacro22917 Vaccinium macrocarpon HOM05D006909 ORTHO05D008682 2.2e-14 83.6 118 38.1
HPP92_015794 Vanilla planifolia HOM05D006909 ORTHO05D008682 2.2e-14 83.6 138 34.8
FAN17G1137 Fragaria x ananassa HOM05D006909 ORTHO05D008682 2.9e-14 83.2 110 40.9
SGA_v2.0_scaffold27G11701 Striga asiatica HOM05D006909 ORTHO05D008682 2.9e-14 83.2 118 37.3
Ca_12886_v3 Cicer arietinum L. HOM05D006909 ORTHO05D008682 3.7e-14 82.8 128 35.9
Nitab4.5_0004102g0010 Nicotiana tabacum HOM05D006909 ORTHO05D008682 3.7e-14 82.8 119 39.5
Dinv37475 Davidia involucrata HOM05D006909 ORTHO05D008682 4.9e-14 82.4 118 36.4
GSVIVG01035598001 Vitis vinifera HOM05D006909 ORTHO05D008682 1.9e-13 80.5 118 35.6
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 3.2e-13 79.7 120 38.3
Aqoxy7G02568 Aquilegia oxysepala HOM05D006909 ORTHO05D008682 4.1e-13 79.3 114 37.7
ClCG08G012800 Citrullus lanatus HOM05D006909 ORTHO05D008682 4.1e-13 79.3 116 35.3
Migut.A00519 Erythranthe guttata HOM05D006909 ORTHO05D008682 4.1e-13 79.3 142 34.5
Sopen08g023090 Solanum pennellii HOM05D006909 ORTHO05D008682 4.1e-13 79.3 119 38.7
CAN.G195.13 Capsicum annuum HOM05D006909 ORTHO05D008682 5.4e-13 79.0 118 39.0
CsaV3_2G031550 Cucumis sativus L. HOM05D006909 ORTHO05D008682 5.4e-13 79.0 99 40.4
SEGI_25566 Sequoiadendron giganteum HOM05D006909 ORTHO05D008682 7.1e-13 78.6 116 36.2
EL10Ac2g03655 Beta vulgaris HOM05D006909 ORTHO05D008682 9.2e-13 78.2 117 35.0
DCAR_000695 Daucus carota HOM05D006909 ORTHO05D008682 9.2e-13 78.2 120 39.2
MD08G1133200 Malus domestica HOM05D006909 ORTHO05D008682 9.2e-13 78.2 105 40.0
Nn8g41256 Nelumbo nucifera HOM05D006909 ORTHO05D008682 9.2e-13 78.2 100 41.0
Nitab4.5_0004792g0040 Nicotiana tabacum HOM05D006909 ORTHO05D008682 9.2e-13 78.2 118 39.0
Lj8A418T18 Lonicera japonica HOM05D006909 ORTHO05D008682 1.2e-12 77.8 122 35.2
Eucgr.C03977 Eucalyptus grandis HOM05D006909 ORTHO05D008682 1.6e-12 77.4 110 33.6
Solyc08g074450.3 Solanum lycopersicum HOM05D006909 ORTHO05D008682 1.6e-12 77.4 119 37.8
PGSC0003DMG402029598 Solanum tuberosum HOM05D006909 ORTHO05D008682 1.6e-12 77.4 101 40.6
THA.LOC104803576 Tarenaya hassleriana HOM05D006909 ORTHO05D008682 1.6e-12 77.4 109 37.6
AUR62020694 Chenopodium quinoa HOM05D006909 ORTHO05D008682 2.1e-12 77.0 117 35.9
CANSAT25G3210 Cannabis sativa HOM05D006909 ORTHO05D008682 2.7e-12 76.6 117 35.0
MELO3C011204.2 Cucumis melo HOM05D006909 ORTHO05D008682 3.5e-12 76.3 99 38.4
Lj5g0027238 Lotus japonicus HOM05D006909 ORTHO05D008682 3.5e-12 76.3 100 41.0
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 4.6e-12 75.9 119 35.3
Sed0010876 Sechium edule HOM05D006909 ORTHO05D008682 4.6e-12 75.9 99 38.4
Hund08932 Selenicereus undatus HOM05D006909 ORTHO05D008682 4.6e-12 75.9 117 34.2
Thecc.09G001700 Theobroma cacao HOM05D006909 ORTHO05D008682 4.6e-12 75.9 130 32.3
COL.COLO4_18637 Corchorus olitorius HOM05D006909 ORTHO05D008682 6.0e-12 75.5 120 35.8
Sc06g0001370 Simmondsia chinensis HOM05D006909 ORTHO05D008682 6.0e-12 75.5 117 35.0
PGSC0003DMG401029598 Solanum tuberosum HOM05D006909 ORTHO05D008682 6.0e-12 75.5 98 39.8
Gohir.D05G068800 Gossypium hirsutum HOM05D006909 ORTHO05D008682 7.8e-12 75.1 142 31.0
Potri.005G179800 Populus trichocarpa HOM05D006909 ORTHO05D008682 1.0e-11 74.7 116 37.9
Gorai.009G069700 Gossypium raimondii HOM05D006909 ORTHO05D008682 1.3e-11 74.3 105 36.2
Sed0021174 Sechium edule HOM05D006909 ORTHO05D008682 1.3e-11 74.3 100 37.0
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 1.7e-11 73.9 99 40.4
Gohir.A05G066300 Gossypium hirsutum HOM05D006909 ORTHO05D008682 2.3e-11 73.6 141 32.6
CARHR239020 Cardamine hirsuta HOM05D006909 ORTHO05D008682 3.9e-11 72.8 126 36.5
AUR62028031 Chenopodium quinoa HOM05D006909 ORTHO05D008682 5.1e-11 72.4 91 39.6
PSO170G1397 Papaver somniferum HOM05D006909 ORTHO05D008682 6.6e-11 72.0 89 40.4
Sc06g0000050 Simmondsia chinensis HOM05D006909 ORTHO05D008682 8.6e-11 71.6 100 37.0
Zm00001eb035450 Zea mays HOM05D006909 ORTHO05D008682 8.6e-11 71.6 99 39.4
Thhalv10026012m.g Eutrema salsugineum HOM05D006909 ORTHO05D008682 1.1e-10 71.2 106 34.9
Aa31LG2G19230 Aethionema arabicum HOM05D006909 ORTHO05D008682 1.5e-10 70.9 136 29.4
PSO063G6267 Papaver somniferum HOM05D006909 ORTHO05D008682 3.3e-10 69.7 119 35.3
SMO114G0147 Selaginella moellendorffii HOM05D006909 ORTHO05D008682 1.2e-09 67.8 87 41.4
AT4G31115 Arabidopsis thaliana HOM05D006909 ORTHO05D008682 1.6e-09 67.4 123 32.5
BcaNung01544 Brassica carinata HOM05D006909 ORTHO05D008682 2.1e-09 67.0 124 31.5
Cpa.g.sc117.16 Carica papaya HOM05D006909 ORTHO05D008682 2.1e-09 67.0 165 27.3
Sp7g28990 Schrenkiella parvula HOM05D006909 ORTHO05D008682 2.1e-09 67.0 142 31.0
A03p60540 Brassica napus HOM05D006909 ORTHO05D008682 2.8e-09 66.6 104 33.7
Carub.0007s0942 Capsella rubella HOM05D006909 ORTHO05D008682 2.8e-09 66.6 90 38.9
AL7G20960 Arabidopsis lyrata HOM05D006909 ORTHO05D008682 3.6e-09 66.2 123 33.3
Os08g0521800 Oryza sativa ssp. japonica HOM05D006909 ORTHO05D008682 4.7e-09 65.9 99 39.4
C07p58450 Brassica napus HOM05D006909 ORTHO05D008682 1.1e-08 64.7 73 41.1
BraA03t15093Z Brassica rapa HOM05D006909 ORTHO05D008682 3.1e-08 63.2 73 42.5
BcaNung02722 Brassica carinata HOM05D006909 ORTHO05D008682 4.0e-08 62.8 71 40.8
BolC7t46299H Brassica oleracea HOM05D006909 ORTHO05D008682 4.0e-08 62.8 71 40.8
CDE02G4188 Ceratophyllum demersum HOM05D006909 ORTHO05D008682 5.8e-07 58.9 58 46.6


User provided reference genes

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