Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 5.1e-236 820.8 463 100.0
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 3.5e-83 313.2 396 51.8
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 4.2e-73 279.6 396 44.9
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 4.1e-68 263.1 412 41.7
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 5.4e-68 262.7 339 46.9
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 1.6e-67 261.2 399 42.6
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 4.5e-67 259.6 393 43.3
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 5.9e-67 259.2 401 42.1
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.3e-66 258.1 402 42.5
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 5.0e-66 256.1 316 47.5
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 5.0e-66 256.1 409 40.8
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 5.0e-66 256.1 354 44.6
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 6.5e-66 255.8 339 45.7
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 6.5e-66 255.8 342 45.3
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 6.5e-66 255.8 400 42.8
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 2.5e-65 253.8 472 37.3
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 2.5e-65 253.8 367 43.6
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 2.5e-65 253.8 402 42.0
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 2.5e-65 253.8 374 42.5
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 3.2e-65 253.4 398 43.0
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 3.2e-65 253.4 402 41.8
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 3.2e-65 253.4 401 42.1
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 4.2e-65 253.1 402 41.0
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 4.2e-65 253.1 342 45.0
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 1.6e-64 251.1 316 45.6
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 2.1e-64 250.8 345 44.3
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 2.8e-64 250.4 316 46.2
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 3.6e-64 250.0 369 43.6
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 4.7e-64 249.6 341 45.7
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 6.1e-64 249.2 324 46.3
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 6.1e-64 249.2 367 42.8
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 8.0e-64 248.8 410 40.7
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 8.0e-64 248.8 394 41.9
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 1.0e-63 248.4 355 43.4
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 1.4e-63 248.1 403 40.7
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.8e-63 247.7 411 41.1
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 1.8e-63 247.7 343 42.9
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 1.8e-63 247.7 350 45.7
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 2.3e-63 247.3 393 42.0
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 3.0e-63 246.9 342 44.2
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 5.2e-63 246.1 350 45.1
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 1.2e-62 245.0 391 42.2
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.5e-62 244.6 428 40.2
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 1.5e-62 244.6 370 42.7
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 3.4e-62 243.4 368 42.9
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 5.7e-62 242.7 380 42.9
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 5.7e-62 242.7 429 37.5
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 7.5e-62 242.3 340 42.9
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 7.5e-62 242.3 429 37.5
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 9.8e-62 241.9 385 41.0
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 1.7e-61 241.1 410 39.0
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 2.8e-61 240.4 381 41.5
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 1.4e-60 238.0 390 39.5
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 1.8e-60 237.7 406 38.7
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 5.4e-60 236.1 387 41.9
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 2.7e-59 233.8 405 39.5
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 3.5e-59 233.4 372 40.9
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 3.5e-59 233.4 376 41.8
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 3.5e-59 233.4 410 40.0
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 1.0e-58 231.9 400 39.8
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 2.9e-58 230.3 376 41.0
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 3.8e-58 229.9 332 42.5
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 8.6e-58 228.8 335 43.3
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 7.3e-57 225.7 390 39.5
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 7.3e-57 225.7 385 40.0
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 2.1e-56 224.2 324 42.3
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 2.8e-56 223.8 404 38.4
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 4.7e-56 223.0 330 42.4
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 4.7e-56 223.0 368 39.7
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 4.7e-56 223.0 352 38.4
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 6.1e-56 222.6 378 41.3
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 2.3e-55 220.7 387 38.8
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 2.3e-55 220.7 278 47.5
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 8.9e-55 218.8 343 39.4
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 1.2e-54 218.4 314 44.6
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 8.0e-48 195.7 350 38.0
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 2.2e-45 187.6 233 47.2
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 2.4e-44 184.1 394 40.4
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 5.4e-44 183.0 355 39.2
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 1.6e-43 181.4 218 45.9
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 2.0e-43 181.0 400 39.5
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 1.3e-42 178.3 233 44.2
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 3.6e-40 170.2 354 35.0
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 6.2e-40 169.5 211 44.5
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 2.3e-39 167.5 322 34.5
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.5e-38 164.9 304 36.8
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 1.0e-34 152.1 270 37.0
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 1.3e-34 151.8 133 59.4
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 2.6e-30 137.5 243 39.5
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 2.6e-30 137.5 409 28.6
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 6.4e-29 132.9 121 60.3
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 6.6e-26 122.9 112 54.5
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 3.3e-25 120.6 190 40.0
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 1.6e-24 118.2 282 32.3
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 6.2e-24 116.3 110 54.5
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 2.2e-21 107.8 100 58.0
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 6.4e-21 106.3 190 37.9
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 7.1e-20 102.8 217 36.4
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 1.3e-18 98.6 77 50.6
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 1.1e-17 95.5 200 35.0
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 1.4e-15 88.6 405 26.7
Os07g0287100 Oryza sativa ssp. japonica HOM05D007236 ORTHO05D009150 2.5e-09 67.8 185 33.5
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 4.5e-06 57.0 107 35.5


User provided reference genes

Program Settings