Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 9.8e-178 626.7 321 100.0
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 1.6e-50 204.1 253 47.0
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 5.4e-35 152.5 269 38.3
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 2.8e-31 140.2 126 54.8
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 3.6e-31 139.8 133 50.4
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 1.4e-30 137.9 136 49.3
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 2.0e-29 134.0 133 48.9
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 5.8e-29 132.5 242 37.2
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 7.6e-29 132.1 235 35.3
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 7.6e-29 132.1 118 54.2
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 9.9e-29 131.7 251 35.9
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 1.3e-28 131.3 117 53.8
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 1.3e-28 131.3 133 48.1
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 1.3e-28 131.3 120 50.8
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 1.7e-28 131.0 132 47.0
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 1.7e-28 131.0 152 45.4
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 2.2e-28 130.6 121 52.9
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 2.9e-28 130.2 235 36.6
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 2.9e-28 130.2 134 47.8
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 2.9e-28 130.2 231 35.5
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 3.8e-28 129.8 125 50.4
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 3.8e-28 129.8 149 45.6
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 8.4e-28 128.6 225 37.3
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 1.1e-27 128.3 129 48.1
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 2.4e-27 127.1 126 47.6
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 3.2e-27 126.7 248 36.3
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 3.2e-27 126.7 126 50.8
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 3.2e-27 126.7 115 53.0
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.2e-27 126.7 115 53.0
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 3.2e-27 126.7 228 37.7
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 4.2e-27 126.3 256 34.8
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 5.4e-27 125.9 124 48.4
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 5.4e-27 125.9 117 51.3
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 7.1e-27 125.6 258 32.9
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 7.1e-27 125.6 115 52.2
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 9.3e-27 125.2 221 38.9
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 1.2e-26 124.8 219 37.4
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 1.2e-26 124.8 131 48.9
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 1.2e-26 124.8 258 34.1
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 1.2e-26 124.8 251 33.9
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 1.2e-26 124.8 152 46.1
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 1.6e-26 124.4 139 48.2
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 2.1e-26 124.0 191 39.8
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 2.7e-26 123.6 120 50.8
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 3.5e-26 123.2 124 47.6
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 3.5e-26 123.2 124 47.6
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 3.5e-26 123.2 124 47.6
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.5e-26 123.2 228 35.1
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 3.5e-26 123.2 228 35.5
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 4.6e-26 122.9 129 46.5
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 4.6e-26 122.9 245 35.9
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 4.6e-26 122.9 234 35.0
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 4.6e-26 122.9 118 50.0
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 4.6e-26 122.9 234 35.9
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 4.6e-26 122.9 160 47.5
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 6.0e-26 122.5 114 49.1
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 7.8e-26 122.1 114 49.1
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.0e-25 121.7 227 36.6
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 1.0e-25 121.7 221 38.5
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 1.7e-25 120.9 216 38.0
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 2.3e-25 120.6 124 48.4
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 2.3e-25 120.6 112 50.0
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 2.3e-25 120.6 129 46.5
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 2.3e-25 120.6 229 36.2
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 3.0e-25 120.2 244 33.2
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 3.9e-25 119.8 129 46.5
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 3.9e-25 119.8 224 35.7
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 5.1e-25 119.4 129 46.5
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 5.1e-25 119.4 115 50.4
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 5.1e-25 119.4 146 43.8
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 8.7e-25 118.6 122 49.2
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 2.5e-24 117.1 245 34.7
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 2.5e-24 117.1 130 46.9
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 2.5e-24 117.1 124 48.4
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 9.6e-24 115.2 123 48.0
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 9.6e-24 115.2 243 33.7
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 9.6e-24 115.2 241 33.2
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 1.3e-23 114.8 151 43.0
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 2.8e-23 113.6 128 43.0
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 3.6e-23 113.2 224 35.7
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 2.4e-22 110.5 122 46.7
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 1.5e-21 107.8 222 36.5
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 3.4e-21 106.7 226 34.5
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 7.6e-21 105.5 136 44.1
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 2.9e-20 103.6 225 36.0
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 1.1e-19 101.7 190 35.8
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 7.1e-19 99.0 102 47.1
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 1.0e-17 95.1 197 34.0
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 7.3e-16 89.0 211 30.3
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 3.6e-15 86.7 134 38.1
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 3.6e-15 86.7 97 45.4
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 1.1e-14 85.1 110 43.6
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 4.5e-13 79.7 109 39.4
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 3.2e-11 73.6 128 37.5


User provided reference genes

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