Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 0.0e+00 1089.7 594 100.0
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 1.2e-109 401.4 610 44.1
Mapoly0004s0145 Marchantia polymorpha HOM05D008307 ORTHO05D010374 2.6e-59 234.2 607 32.5
AagrBONN_evm.TU.Sc2ySwM_369.432 Anthoceros agrestis HOM05D008307 ORTHO05D010374 9.7e-46 189.1 336 36.3
SMO329G0060 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 1.9e-38 164.9 329 33.4
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 3.9e-31 140.6 324 29.6
SMO165G0083 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 1.3e-29 135.6 454 26.2
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 6.9e-28 129.8 297 30.0
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 1.8e-23 115.2 197 33.5
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 8.2e-21 106.3 338 25.1
Cfa014722 Carpinus fangiana HOM05D008307 ORTHO05D010374 7.7e-19 99.8 335 25.7
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 2.2e-18 98.2 288 26.7
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 2.9e-18 97.8 305 26.9
QL06p018536 Quercus lobata HOM05D008307 ORTHO05D010374 1.1e-17 95.9 315 27.0
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 1.1e-17 95.9 366 25.4
Haze_11405 Corylus avellana HOM05D008307 ORTHO05D010374 2.5e-17 94.7 335 25.4
Dinv29844 Davidia involucrata HOM05D008307 ORTHO05D010374 1.6e-16 92.0 316 25.6
Peaxi162Scf00041g00209 Petunia axillaris HOM05D008307 ORTHO05D010374 1.6e-16 92.0 414 23.9
Aqoxy7G00920 Aquilegia oxysepala HOM05D008307 ORTHO05D010374 6.7e-15 86.7 320 24.4
RcHm_v2.0_Chr4g0393941 Rosa chinensis HOM05D008307 ORTHO05D010374 1.5e-14 85.5 282 26.2
THA.LOC104822237 Tarenaya hassleriana HOM05D008307 ORTHO05D010374 2.0e-14 85.1 441 21.1
MD16G1220900 Malus domestica HOM05D008307 ORTHO05D010374 3.3e-14 84.3 313 25.6
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 4.8e-13 80.5 152 34.2
Nitab4.5_0000044g0470 Nicotiana tabacum HOM05D008307 ORTHO05D010374 8.2e-13 79.7 326 25.8
Rhsim04G0177000 Rhododendron simsii HOM05D008307 ORTHO05D010374 1.8e-12 78.6 308 24.7
Potri.010G070001 Populus trichocarpa HOM05D008307 ORTHO05D010374 2.4e-12 78.2 317 23.3
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 3.1e-12 77.8 197 26.9
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 2.0e-11 75.1 197 26.4
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 2.7e-11 74.7 230 25.2
FAN22G1022 Fragaria x ananassa HOM05D000478 ORTHO05D010374 7.7e-11 73.2 308 26.0
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 1.0e-10 72.8 368 22.8
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 1.7e-10 72.0 293 23.2
Sopen09g033190 Solanum pennellii HOM05D008307 ORTHO05D010374 2.9e-10 71.2 330 23.3
CARHR099340 Cardamine hirsuta HOM05D008307 ORTHO05D010374 5.0e-10 70.5 280 22.9
Nitab4.5_0007280g0010 Nicotiana tabacum HOM05D008307 ORTHO05D010374 5.0e-10 70.5 334 22.5
PGSC0003DMG400017215 Solanum tuberosum HOM05D008307 ORTHO05D010374 8.5e-10 69.7 326 22.1
CAN.G220.11 Capsicum annuum HOM05D008307 ORTHO05D010374 2.5e-09 68.2 424 22.2
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 2.5e-09 68.2 196 26.0
CSS0044876 Camellia sinensis var. sinensis HOM05D008307 ORTHO05D010374 4.2e-09 67.4 112 34.8
vmacro08510 Vaccinium macrocarpon HOM05D008307 ORTHO05D010374 5.5e-09 67.0 361 23.3
Migut.N00284 Erythranthe guttata HOM05D008307 ORTHO05D010374 2.7e-08 64.7 457 21.2
DCAR_024261 Daucus carota HOM05D008307 ORTHO05D010374 6.1e-08 63.5 154 31.2
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 8.0e-08 63.2 187 24.1
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 8.0e-08 63.2 187 24.1
DCAR_027325 Daucus carota HOM05D008307 ORTHO05D010374 1.0e-07 62.8 144 28.5
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 1.4e-07 62.4 147 25.9
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 5.2e-07 60.5 203 25.1
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 6.8e-07 60.1 145 24.1
BraA07t28701Z Brassica rapa HOM05D008307 ORTHO05D010374 1.2e-06 59.3 162 27.2
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 1.5e-06 58.9 109 32.1
CBR_g73271 Chara braunii HOM05D008307 ORTHO05D010374 1.5e-06 58.9 129 31.0
Thhalv10020149m.g Eutrema salsugineum HOM05D008307 ORTHO05D010374 3.4e-06 57.8 147 23.8
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 5.7e-06 57.0 254 21.3
A07p09070 Brassica napus HOM05D008307 ORTHO05D010374 5.7e-06 57.0 112 30.4


User provided reference genes

Program Settings