Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 1.8e-140 502.7 273 100.0
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 2.0e-38 163.7 288 41.7
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 4.3e-33 146.0 246 41.1
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 5.3e-31 139.0 140 56.4
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 3.4e-30 136.3 258 37.2
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 1.3e-29 134.4 256 37.1
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 2.9e-29 133.3 254 37.8
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 6.4e-29 132.1 251 38.2
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 4.2e-28 129.4 258 37.2
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 7.1e-28 128.6 253 37.5
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.6e-27 127.5 254 35.8
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 1.6e-27 127.5 255 36.1
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.1e-27 127.1 278 34.5
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 2.7e-27 126.7 276 35.9
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 3.5e-27 126.3 271 34.3
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 4.6e-27 125.9 248 35.5
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 6.0e-27 125.6 257 37.0
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 6.0e-27 125.6 250 35.2
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 1.0e-26 124.8 239 38.5
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 1.0e-26 124.8 247 35.6
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 1.0e-26 124.8 252 34.9
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 1.3e-26 124.4 248 41.5
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 1.8e-26 124.0 259 35.1
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 2.3e-26 123.6 256 34.8
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 3.0e-26 123.2 273 33.3
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 6.7e-26 122.1 260 33.8
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 6.7e-26 122.1 239 36.8
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 6.7e-26 122.1 253 36.0
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 6.7e-26 122.1 246 36.6
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 6.7e-26 122.1 269 33.8
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 8.7e-26 121.7 268 34.3
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 1.1e-25 121.3 246 32.5
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 1.9e-25 120.6 237 35.9
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 2.5e-25 120.2 272 33.8
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 2.5e-25 120.2 246 32.1
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 2.5e-25 120.2 268 34.3
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 2.5e-25 120.2 245 35.1
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 2.5e-25 120.2 265 34.7
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 3.3e-25 119.8 245 35.5
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 4.3e-25 119.4 237 35.9
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 4.3e-25 119.4 237 35.9
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 5.6e-25 119.0 230 35.2
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 9.6e-25 118.2 266 33.5
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.6e-24 117.5 251 33.5
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 2.1e-24 117.1 260 32.3
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 2.8e-24 116.7 262 32.1
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.8e-24 116.7 251 33.5
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 2.8e-24 116.7 248 34.7
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 3.7e-24 116.3 264 33.0
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 6.2e-24 115.5 242 36.0
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 6.2e-24 115.5 271 34.3
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 1.1e-23 114.8 241 36.1
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.1e-23 114.8 251 33.1
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.1e-23 114.8 269 32.3
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 1.4e-23 114.4 266 33.5
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 2.4e-23 113.6 249 34.5
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 2.4e-23 113.6 258 33.3
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 2.4e-23 113.6 243 37.9
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 3.1e-23 113.2 244 34.0
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 3.1e-23 113.2 267 34.8
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 3.1e-23 113.2 277 32.5
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 4.0e-23 112.8 242 33.9
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 4.0e-23 112.8 250 32.8
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 4.0e-23 112.8 272 33.8
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 4.0e-23 112.8 252 32.1
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 5.3e-23 112.5 278 33.5
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 5.3e-23 112.5 278 33.5
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 5.3e-23 112.5 245 35.9
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 5.3e-23 112.5 230 35.2
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 6.9e-23 112.1 246 36.2
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 1.2e-22 111.3 283 33.9
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 1.2e-22 111.3 260 33.1
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 1.2e-22 111.3 259 33.2
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 1.2e-22 111.3 262 32.4
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 1.2e-22 111.3 227 37.9
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 1.2e-22 111.3 267 34.1
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 1.2e-22 111.3 253 33.6
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 1.5e-22 110.9 278 32.4
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 2.6e-22 110.2 258 34.1
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 3.4e-22 109.8 257 32.3
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 3.4e-22 109.8 249 34.5
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 4.5e-22 109.4 203 34.5
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 4.5e-22 109.4 243 35.4
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 5.8e-22 109.0 240 32.5
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 5.8e-22 109.0 256 34.8
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 5.8e-22 109.0 254 35.8
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 1.0e-21 108.2 219 36.1
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 1.0e-21 108.2 270 33.3
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 1.0e-21 108.2 243 36.6
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 2.2e-21 107.1 241 35.3
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 3.8e-21 106.3 279 31.9
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 3.8e-21 106.3 258 32.6
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 1.1e-20 104.8 242 34.3
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 2.5e-20 103.6 148 42.6
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 2.5e-20 103.6 279 31.2
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 2.5e-20 103.6 259 33.6
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 3.2e-20 103.2 207 35.3
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 3.2e-20 103.2 285 31.2
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 3.2e-20 103.2 249 32.5
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 5.5e-20 102.4 290 32.8
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 5.5e-20 102.4 258 33.3
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 7.1e-20 102.1 261 33.0
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 7.1e-20 102.1 258 35.3
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 7.1e-20 102.1 277 34.7
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 9.3e-20 101.7 246 31.3
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 1.2e-19 101.3 261 33.3
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 1.6e-19 100.9 190 36.8
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 3.5e-19 99.8 252 31.7
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 3.5e-19 99.8 146 39.7
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 1.0e-18 98.2 245 32.2
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 1.3e-18 97.8 253 32.4
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 1.8e-18 97.4 250 32.4
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 1.9e-17 94.0 240 33.3
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 2.5e-17 93.6 167 38.3
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 5.7e-17 92.4 267 31.8
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 2.1e-16 90.5 199 33.7
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 6.2e-16 89.0 97 48.5
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 6.5e-13 79.0 136 41.9
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 2.5e-09 67.0 149 33.6
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 6.3e-08 62.4 87 39.1
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 2.6e-06 57.0 202 31.7


User provided reference genes

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