Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_12980 Physcomitrium patens HOM05D004273 ORTHO05D031172 0.0e+00 1856.6 917 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2361 Anthoceros agrestis HOM05D004273 ORTHO05D031172 1.3e-62 245.7 218 49.5
Mapoly0091s0075 Marchantia polymorpha HOM05D004273 ORTHO05D031172 1.5e-61 242.3 200 55.0
Medtr4g063605 Medicago truncatula HOM05D004273 ORTHO05D005041 6.3e-12 77.4 185 28.1
FvH4_3g35600 Fragaria vesca HOM05D004273 ORTHO05D005041 8.3e-12 77.0 185 29.2
RcHm_v2.0_Chr5g0063781 Rosa chinensis HOM05D004273 ORTHO05D005041 8.3e-12 77.0 185 29.7
FAN21G1625 Fragaria x ananassa HOM05D004273 ORTHO05D005041 1.1e-11 76.6 185 29.2
Glyma.11G141100 Glycine max HOM05D004273 ORTHO05D005041 1.8e-11 75.9 270 24.8
MD11G1142800 Malus domestica HOM05D004273 ORTHO05D005041 2.4e-11 75.5 185 27.0
MD03G1096600 Malus domestica HOM05D004273 ORTHO05D005041 5.3e-11 74.3 199 27.1
TPR.G10209 Trifolium pratense HOM05D004273 ORTHO05D005041 1.2e-10 73.2 190 25.8
Lj1A156G61 Lonicera japonica HOM05D004273 ORTHO05D005041 2.7e-10 72.0 204 27.0
GSVIVG01025001001 Vitis vinifera HOM05D004273 ORTHO05D005041 2.7e-10 72.0 200 25.5
Hund12542 Selenicereus undatus HOM05D004273 ORTHO05D005041 3.5e-10 71.6 206 27.2
FAN11G1845 Fragaria x ananassa HOM05D004273 ORTHO05D005041 4.5e-10 71.2 191 29.3
Psat7g217720 Pisum sativum HOM05D004273 ORTHO05D005041 1.0e-09 70.1 294 22.4
CAN.G394.46 Capsicum annuum HOM05D004273 ORTHO05D005041 1.3e-09 69.7 173 23.7
Dinv31442 Davidia involucrata HOM05D004273 ORTHO05D005041 1.3e-09 69.7 208 22.6
Lj3g0025927 Lotus japonicus HOM05D004273 ORTHO05D005041 1.7e-09 69.3 185 25.9
FAN16G0116 Fragaria x ananassa HOM05D004273 ORTHO05D005041 2.2e-09 68.9 191 28.8
VMungo1080G0602 Vigna mungo HOM05D004273 ORTHO05D005041 2.2e-09 68.9 186 25.3
arahy.Tifrunner.gnm1.ann1.N7EFUM Arachis hypogaea HOM05D004273 ORTHO05D005041 2.9e-09 68.6 125 29.6
arahy.Tifrunner.gnm1.ann1.T00HES Arachis hypogaea HOM05D004273 ORTHO05D005041 3.8e-09 68.2 125 29.6
Phvul.011G065600 Phaseolus vulgaris HOM05D004273 ORTHO05D005041 3.8e-09 68.2 287 23.0
Manes.04G033100 Manihot esculenta HOM05D004273 ORTHO05D005041 5.0e-09 67.8 186 24.2
Peaxi162Scf00679g00214 Petunia axillaris HOM05D004273 ORTHO05D005041 6.5e-09 67.4 173 23.1
arahy.Tifrunner.gnm1.ann1.0ME452 Arachis hypogaea HOM05D004273 ORTHO05D005041 8.5e-09 67.0 225 21.8
Glyma.15G039800 Glycine max HOM05D004273 ORTHO05D005041 8.5e-09 67.0 209 24.9
arahy.Tifrunner.gnm1.ann1.44D9RB Arachis hypogaea HOM05D004273 ORTHO05D005041 1.5e-08 66.2 282 19.9
Hma1.2p1_0624F.1_g191440 Hydrangea macrophylla HOM05D004273 ORTHO05D005041 1.2e-07 63.2 183 25.1
VMungo1127G1030 Vigna mungo HOM05D004273 ORTHO05D005041 1.2e-07 63.2 185 25.4
Nn2g10411 Nelumbo nucifera HOM05D004273 ORTHO05D005041 1.6e-07 62.8 181 25.4
Glyma.13G334700 Glycine max HOM05D004273 ORTHO05D005041 6.1e-07 60.8 214 22.9


User provided reference genes

Program Settings