Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_12290 Physcomitrium patens HOM05D004003 ORTHO05D004595 8.3e-140 500.4 251 100.0
Mapoly0111s0029 Marchantia polymorpha HOM05D004003 ORTHO05D004595 6.5e-52 208.4 135 73.3
AagrBONN_evm.TU.Sc2ySwM_344.4010 Anthoceros agrestis HOM05D004003 ORTHO05D004595 8.8e-49 198.0 134 71.6
SEGI_14933 Sequoiadendron giganteum HOM05D004003 ORTHO05D004595 4.4e-48 195.7 134 70.9
EL10Ac2g03211 Beta vulgaris HOM05D004003 ORTHO05D004595 4.1e-46 189.1 134 68.7
Hund13071 Selenicereus undatus HOM05D004003 ORTHO05D004595 4.1e-46 189.1 134 67.9
MELO3C006949.2 Cucumis melo HOM05D004003 ORTHO05D004595 7.0e-46 188.3 134 67.9
arahy.Tifrunner.gnm1.ann1.R03NAB Arachis hypogaea HOM05D004003 ORTHO05D004595 9.1e-46 188.0 134 65.7
Nn6g32413 Nelumbo nucifera HOM05D004003 ORTHO05D004595 9.1e-46 188.0 134 67.9
ATR0721G154 Amborella trichopoda HOM05D004003 ORTHO05D004595 1.2e-45 187.6 130 69.2
CsaV3_3G017590 Cucumis sativus L. HOM05D004003 ORTHO05D004595 1.2e-45 187.6 134 67.2
Gohir.D11G013100 Gossypium hirsutum HOM05D004003 ORTHO05D004595 2.6e-45 186.4 134 68.7
Sed0009881 Sechium edule HOM05D004003 ORTHO05D004595 2.6e-45 186.4 134 67.9
arahy.Tifrunner.gnm1.ann1.SB31NP Arachis hypogaea HOM05D004003 ORTHO05D004595 4.5e-45 185.7 134 64.9
Sed0014667 Sechium edule HOM05D004003 ORTHO05D004595 4.5e-45 185.7 134 67.2
Aqoxy7G00202 Aquilegia oxysepala HOM05D004003 ORTHO05D004595 5.9e-45 185.3 134 67.2
COL.COLO4_30289 Corchorus olitorius HOM05D004003 ORTHO05D004595 7.7e-45 184.9 134 67.2
Rhsim09G0201100 Rhododendron simsii HOM05D004003 ORTHO05D004595 7.7e-45 184.9 134 65.7
TAR629G0127 Trochodendron aralioides HOM05D004003 ORTHO05D004595 7.7e-45 184.9 134 67.2
CSS0000705 Camellia sinensis var. sinensis HOM05D004003 ORTHO05D004595 1.0e-44 184.5 134 65.7
Duzib084G0289 Durio zibethinus HOM05D004003 ORTHO05D004595 1.0e-44 184.5 134 67.2
GSVIVG01028820001 Vitis vinifera HOM05D004003 ORTHO05D004595 1.0e-44 184.5 134 66.4
ClCG05G008500 Citrullus lanatus HOM05D004003 ORTHO05D004595 1.3e-44 184.1 134 65.7
DCAR_010652 Daucus carota HOM05D004003 ORTHO05D004595 1.3e-44 184.1 136 66.9
Actinidia08590 Actinidia chinensis HOM05D004003 ORTHO05D004595 1.7e-44 183.7 134 64.9
Gohir.A11G012800 Gossypium hirsutum HOM05D004003 ORTHO05D004595 1.7e-44 183.7 134 67.2
Hma1.2p1_1713F.1_g298900 Hydrangea macrophylla HOM05D004003 ORTHO05D004595 1.7e-44 183.7 134 64.9
THA.LOC104800278 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 1.7e-44 183.7 134 67.2
Thecc.03G186200 Theobroma cacao HOM05D004003 ORTHO05D004595 1.7e-44 183.7 134 67.9
Gorai.007G013400 Gossypium raimondii HOM05D004003 ORTHO05D004595 2.2e-44 183.3 136 68.4
Duzib205G1856 Durio zibethinus HOM05D004003 ORTHO05D004595 2.9e-44 183.0 134 66.4
Eucgr.A02717 Eucalyptus grandis HOM05D004003 ORTHO05D004595 2.9e-44 183.0 134 65.7
Lalb_Chr03g0034981 Lupinus albus HOM05D004003 ORTHO05D004595 2.9e-44 183.0 134 64.9
MD07G1280400 Malus domestica HOM05D004003 ORTHO05D004595 2.9e-44 183.0 134 65.7
TWI23G0858 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 2.9e-44 183.0 134 66.4
AUR62037745 Chenopodium quinoa HOM05D004003 ORTHO05D004595 3.8e-44 182.6 134 65.7
Manes.06G153700 Manihot esculenta HOM05D004003 ORTHO05D004595 3.8e-44 182.6 134 66.4
CDE05G0545 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 5.0e-44 182.2 135 65.9
Cc02_g02230 Coffea canephora HOM05D004003 ORTHO05D004595 5.0e-44 182.2 136 64.0
Gohir.D12G255500 Gossypium hirsutum HOM05D004003 ORTHO05D004595 5.0e-44 182.2 134 65.7
Gohir.D12G255550 Gossypium hirsutum HOM05D004003 ORTHO05D004595 5.0e-44 182.2 134 65.7
THA.LOC104825117 Tarenaya hassleriana HOM05D004003 ORTHO05D004595 5.0e-44 182.2 134 67.2
Dinv35269 Davidia involucrata HOM05D004003 ORTHO05D004595 6.5e-44 181.8 134 64.9
Gohir.A12G253200 Gossypium hirsutum HOM05D004003 ORTHO05D004595 6.5e-44 181.8 134 65.7
Lalb_Chr19g0130491 Lupinus albus HOM05D004003 ORTHO05D004595 6.5e-44 181.8 134 64.2
Manes.14G021000 Manihot esculenta HOM05D004003 ORTHO05D004595 6.5e-44 181.8 134 65.7
Ah.11g045360 Amaranthus hybridus HOM05D004003 ORTHO05D004595 8.5e-44 181.4 134 65.7
CDE05G3305 Ceratophyllum demersum HOM05D004003 ORTHO05D004595 8.5e-44 181.4 135 65.2
Glyma.09G129000 Glycine max HOM05D004003 ORTHO05D004595 8.5e-44 181.4 134 65.7
Gorai.008G273600 Gossypium raimondii HOM05D004003 ORTHO05D004595 8.5e-44 181.4 134 65.7
SGA_v2.0_scaffold10G05280 Striga asiatica HOM05D004003 ORTHO05D004595 8.5e-44 181.4 136 65.4
Actinidia03142 Actinidia chinensis HOM05D004003 ORTHO05D004595 1.1e-43 181.0 134 65.7
Thhalv10026409m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 1.1e-43 181.0 134 66.4
Sp7g25950 Schrenkiella parvula HOM05D004003 ORTHO05D004595 1.1e-43 181.0 134 65.7
Actinidia31844 Actinidia chinensis HOM05D004003 ORTHO05D004595 1.9e-43 180.3 134 64.9
AL8G27280 Arabidopsis lyrata HOM05D004003 ORTHO05D004595 1.9e-43 180.3 134 66.4
Carub.0008s1300 Capsella rubella HOM05D004003 ORTHO05D004595 1.9e-43 180.3 134 65.7
CiPaw.06G004300 Carya illinoinensis HOM05D004003 ORTHO05D004595 1.9e-43 180.3 134 64.2
Thhalv10014849m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 1.9e-43 180.3 134 65.7
PGR042G1718 Punica granatum HOM05D004003 ORTHO05D004595 1.9e-43 180.3 134 66.4
BcaC01g06202 Brassica carinata HOM05D004003 ORTHO05D004595 3.2e-43 179.5 134 65.7
A03p15550 Brassica napus HOM05D004003 ORTHO05D004595 3.2e-43 179.5 134 65.7
C03p18160 Brassica napus HOM05D004003 ORTHO05D004595 3.2e-43 179.5 134 65.7
BolC3t14217H Brassica oleracea HOM05D004003 ORTHO05D004595 3.2e-43 179.5 134 65.7
Rhsim03G0192400 Rhododendron simsii HOM05D004003 ORTHO05D004595 3.2e-43 179.5 129 65.9
SalBow2G3526 Salvia bowleyana HOM05D004003 ORTHO05D004595 3.2e-43 179.5 136 63.2
Sc14g0006860 Simmondsia chinensis HOM05D004003 ORTHO05D004595 3.2e-43 179.5 134 63.4
BcaB01g04212 Brassica carinata HOM05D004003 ORTHO05D004595 4.2e-43 179.1 134 65.7
BraA03t10847Z Brassica rapa HOM05D004003 ORTHO05D004595 4.2e-43 179.1 134 65.7
Ca_20595_v3 Cicer arietinum L. HOM05D004003 ORTHO05D004595 4.2e-43 179.1 134 62.7
FvH4_7g30480 Fragaria vesca HOM05D004003 ORTHO05D004595 4.2e-43 179.1 134 64.9
FAN01G1512 Fragaria x ananassa HOM05D004003 ORTHO05D004595 4.2e-43 179.1 134 64.9
FAN06G3020 Fragaria x ananassa HOM05D004003 ORTHO05D004595 4.2e-43 179.1 134 64.9
FAN10G2159 Fragaria x ananassa HOM05D004003 ORTHO05D004595 4.2e-43 179.1 134 64.9
Phvul.004G105700 Phaseolus vulgaris HOM05D004003 ORTHO05D004595 4.2e-43 179.1 134 64.2
RcHm_v2.0_Chr1g0378851 Rosa chinensis HOM05D004003 ORTHO05D004595 4.2e-43 179.1 134 64.9
MD01G1210300 Malus domestica HOM05D004003 ORTHO05D004595 5.5e-43 178.7 134 65.7
Sp6g15000 Schrenkiella parvula HOM05D004003 ORTHO05D004595 5.5e-43 178.7 134 65.7
VMungo0464G2050 Vigna mungo HOM05D004003 ORTHO05D004595 5.5e-43 178.7 134 64.9
CARHR265770 Cardamine hirsuta HOM05D004003 ORTHO05D004595 7.2e-43 178.3 134 65.7
CBR_g31069 Chara braunii HOM05D004003 ORTHO05D004595 7.2e-43 178.3 133 64.7
Oeu061668.1 Olea europaea HOM05D004003 ORTHO05D004595 7.2e-43 178.3 136 64.0
Prupe.2G302600 Prunus persica HOM05D004003 ORTHO05D004595 7.2e-43 178.3 134 64.2
A02p11580 Brassica napus HOM05D004003 ORTHO05D004595 9.4e-43 177.9 134 64.9
BraA02t06220Z Brassica rapa HOM05D004003 ORTHO05D004595 9.4e-43 177.9 134 64.9
FAN03G0349 Fragaria x ananassa HOM05D004003 ORTHO05D004595 9.4e-43 177.9 134 64.2
FAN03G2611 Fragaria x ananassa HOM05D004003 ORTHO05D004595 9.4e-43 177.9 134 64.2
FAN06G1184 Fragaria x ananassa HOM05D004003 ORTHO05D004595 9.4e-43 177.9 134 64.2
Psat0s1604g0040 Pisum sativum HOM05D004003 ORTHO05D004595 9.4e-43 177.9 134 61.9
QL09p012375 Quercus lobata HOM05D004003 ORTHO05D004595 9.4e-43 177.9 134 64.2
A10p10290 Brassica napus HOM05D004003 ORTHO05D004595 1.2e-42 177.6 134 64.9
BraA10t43109Z Brassica rapa HOM05D004003 ORTHO05D004595 1.2e-42 177.6 134 64.9
Lj2g0001989 Lotus japonicus HOM05D004003 ORTHO05D004595 1.2e-42 177.6 134 63.4
Atru.chr1.335 Acer truncatum HOM05D004003 ORTHO05D004595 1.6e-42 177.2 134 64.9
BcaB08g35638 Brassica carinata HOM05D004003 ORTHO05D004595 1.6e-42 177.2 134 64.9
Ciclev10006072m.g Citrus clementina HOM05D004003 ORTHO05D004595 1.6e-42 177.2 134 64.2
Dinv28379 Davidia involucrata HOM05D004003 ORTHO05D004595 1.6e-42 177.2 134 64.2
Lj1A1007T57 Lonicera japonica HOM05D004003 ORTHO05D004595 1.6e-42 177.2 136 64.7
Lj1A1007T58 Lonicera japonica HOM05D004003 ORTHO05D004595 1.6e-42 177.2 136 64.7
PSO017G3679 Papaver somniferum HOM05D004003 ORTHO05D004595 1.6e-42 177.2 136 63.2
Aa31LG3G9080 Aethionema arabicum HOM05D004003 ORTHO05D004595 2.1e-42 176.8 134 64.2
Lsat_1_v5_gn_2_131500 Lactuca sativa HOM05D004003 ORTHO05D004595 2.1e-42 176.8 139 62.6
PSO478G4828 Papaver somniferum HOM05D004003 ORTHO05D004595 2.1e-42 176.8 137 62.8
AT5G52840 Arabidopsis thaliana HOM05D004003 ORTHO05D004595 2.7e-42 176.4 134 64.9
MSTRG.8697 Avicennia marina HOM05D004003 ORTHO05D004595 2.7e-42 176.4 136 62.5
FAN10G2319 Fragaria x ananassa HOM05D004003 ORTHO05D004595 2.7e-42 176.4 134 64.2
BcaC04g20535 Brassica carinata HOM05D004003 ORTHO05D004595 4.7e-42 175.6 134 64.9
C09p42440 Brassica napus HOM05D004003 ORTHO05D004595 4.7e-42 175.6 134 64.9
Psat5g299680 Pisum sativum HOM05D004003 ORTHO05D004595 4.7e-42 175.6 134 61.2
DCAR_020275 Daucus carota HOM05D004003 ORTHO05D004595 6.1e-42 175.3 136 65.4
Lsat_1_v5_gn_9_56860 Lactuca sativa HOM05D004003 ORTHO05D004595 6.1e-42 175.3 138 62.3
TPR.G27150 Trifolium pratense HOM05D004003 ORTHO05D004595 6.1e-42 175.3 134 60.4
Oeu003331.1 Olea europaea HOM05D004003 ORTHO05D004595 8.0e-42 174.9 136 62.5
CANSAT21G1389 Cannabis sativa HOM05D004003 ORTHO05D004595 1.0e-41 174.5 134 64.9
CANSAT21G1446 Cannabis sativa HOM05D004003 ORTHO05D004595 1.0e-41 174.5 134 64.9
Migut.F01081 Erythranthe guttata HOM05D004003 ORTHO05D004595 1.0e-41 174.5 136 61.8
TWI14G1326 Tripterygium wilfordii HOM05D004003 ORTHO05D004595 1.0e-41 174.5 137 63.5
BcaB05g21985 Brassica carinata HOM05D004003 ORTHO05D004595 1.4e-41 174.1 134 64.2
Nitab4.5_0011314g0010 Nicotiana tabacum HOM05D004003 ORTHO05D004595 1.8e-41 173.7 136 63.2
Peaxi162Scf00444g00034 Petunia axillaris HOM05D004003 ORTHO05D004595 1.8e-41 173.7 136 61.0
CAN.G126.15 Capsicum annuum HOM05D004003 ORTHO05D004595 2.3e-41 173.3 136 64.0
HanXRQChr15g0494181 Helianthus annuus HOM05D004003 ORTHO05D004595 2.3e-41 173.3 138 60.1
Potri.004G071900 Populus trichocarpa HOM05D004003 ORTHO05D004595 2.3e-41 173.3 130 65.4
unitig_0.g1158 Utricularia gibba HOM05D004003 ORTHO05D004595 2.3e-41 173.3 136 62.5
Medtr6g053280 Medicago truncatula HOM05D004003 ORTHO05D004595 3.0e-41 172.9 134 60.4
Solyc03g007660.4 Solanum lycopersicum HOM05D004003 ORTHO05D004595 3.0e-41 172.9 136 64.0
Sopen03g003590 Solanum pennellii HOM05D004003 ORTHO05D004595 3.0e-41 172.9 136 64.0
Nitab4.5_0000472g0260 Nicotiana tabacum HOM05D004003 ORTHO05D004595 5.2e-41 172.2 136 63.2
ECA232G1033 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.1e-40 171.0 138 60.1
HPP92_001384 Vanilla planifolia HOM05D004003 ORTHO05D004595 1.5e-40 170.6 139 61.2
Zm00001eb015010 Zea mays HOM05D004003 ORTHO05D004595 2.0e-40 170.2 142 61.3
Sabra04G0047300 Salix brachista HOM05D004003 ORTHO05D004595 4.4e-40 169.1 130 65.4
Sabra17G0124400 Salix brachista HOM05D004003 ORTHO05D004595 4.4e-40 169.1 130 63.1
Solyc06g036350.3 Solanum lycopersicum HOM05D004003 ORTHO05D004595 1.3e-39 167.5 136 61.8
Sopen06g012130 Solanum pennellii HOM05D004003 ORTHO05D004595 1.3e-39 167.5 136 61.8
PGSC0003DMG400028905 Solanum tuberosum HOM05D004003 ORTHO05D004595 1.7e-39 167.2 136 61.0
Potri.017G149100 Populus trichocarpa HOM05D004003 ORTHO05D004595 2.2e-39 166.8 130 63.1
Os03g0313000 Oryza sativa ssp. japonica HOM05D004003 ORTHO05D004595 2.8e-39 166.4 142 59.9
C02p19300 Brassica napus HOM05D004003 ORTHO05D004595 8.2e-39 164.9 134 62.7
BolC2t08066H Brassica oleracea HOM05D004003 ORTHO05D004595 8.2e-39 164.9 134 62.7
ECA233G0998 Erigeron canadensis HOM05D004003 ORTHO05D004595 7.0e-38 161.8 138 57.2
vmacro06614 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 1.3e-36 157.5 190 46.3
SMO119G0129 Selaginella moellendorffii HOM05D004003 ORTHO05D004595 1.4e-33 147.5 120 60.0
AUR62042233 Chenopodium quinoa HOM05D004003 ORTHO05D004595 2.3e-33 146.7 134 55.2
PSO478G1314 Papaver somniferum HOM05D004003 ORTHO05D004595 1.8e-30 137.1 111 57.7
BolC9t57124H Brassica oleracea HOM05D004003 ORTHO05D004595 1.2e-29 134.4 134 52.2
Ah.10g032500 Amaranthus hybridus HOM05D004003 ORTHO05D004595 1.6e-29 134.0 143 48.3
HanXRQChr10g0304961 Helianthus annuus HOM05D004003 ORTHO05D004595 1.6e-29 134.0 107 65.4
Haze_00063 Corylus avellana HOM05D004003 ORTHO05D004595 1.1e-27 127.9 97 61.9
TAR636G0624 Trochodendron aralioides HOM05D004003 ORTHO05D004595 4.7e-26 122.5 97 59.8
Zm00001eb395850 Zea mays HOM05D004003 ORTHO05D004595 4.7e-26 122.5 111 60.4
MD00G1172600 Malus domestica HOM05D004003 ORTHO05D004595 1.8e-25 120.6 117 52.1
BcaC03g14495 Brassica carinata HOM05D004003 ORTHO05D004595 1.7e-23 114.0 88 65.9
RcHm_v2.0_Chr1g0362161 Rosa chinensis HOM05D004003 ORTHO05D004595 1.4e-22 110.9 86 66.3
Ah.03g141030 Amaranthus hybridus HOM05D004003 ORTHO05D004595 5.9e-21 105.5 111 50.5
Thhalv10015894m.g Eutrema salsugineum HOM05D004003 ORTHO05D004595 7.7e-21 105.1 115 52.2
MD13G1261600 Malus domestica HOM05D004003 ORTHO05D004595 7.7e-21 105.1 94 54.3
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 5.0e-20 102.4 105 55.2
MCO01G593 Micromonas commoda HOM05D004003 ORTHO05D004595 2.3e-17 93.6 104 48.1
MCO01G594 Micromonas commoda HOM05D004003 ORTHO05D004595 2.3e-17 93.6 104 48.1
Psat6g098040 Pisum sativum HOM05D000395 ORTHO05D004595 2.3e-17 93.6 95 52.6
vmacro09809 Vaccinium macrocarpon HOM05D004003 ORTHO05D004595 2.3e-17 93.6 113 41.6
Dinv24022 Davidia involucrata HOM05D004003 ORTHO05D004595 8.3e-15 85.1 72 58.3
ECA240G1980 Erigeron canadensis HOM05D004003 ORTHO05D004595 4.1e-14 82.8 104 41.3
ECA240G4361 Erigeron canadensis HOM05D004003 ORTHO05D004595 4.1e-14 82.8 104 41.3
ECA240G4047 Erigeron canadensis HOM05D004003 ORTHO05D004595 2.3e-12 77.0 102 39.2
Haze_26197 Corylus avellana HOM05D004003 ORTHO05D004595 5.0e-12 75.9 95 38.9
ECA238G0868 Erigeron canadensis HOM05D004003 ORTHO05D004595 1.1e-11 74.7 134 33.6
CAN.G204.11 Capsicum annuum HOM05D004003 ORTHO05D004595 1.9e-11 73.9 55 61.8
Cre13.g568800 Chlamydomonas reinhardtii HOM05D004003 ORTHO05D004595 9.5e-11 71.6 99 39.4
Rhsim03G0124900 Rhododendron simsii HOM05D004003 ORTHO05D004595 1.2e-08 64.7 55 60.0
PRCOL_00006691 Prasinoderma coloniale HOM05D004003 ORTHO05D004595 5.4e-06 55.8 99 39.4


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