Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 0.0e+00 1111.7 547 100.0
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.9e-230 802.0 550 71.8
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 5.5e-112 409.1 568 41.0
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 2.7e-95 353.6 559 35.4
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 3.6e-95 353.2 574 38.5
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 4.6e-95 352.8 487 38.8
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 3.0e-94 350.1 560 37.7
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 5.1e-94 349.4 562 37.2
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 5.1e-94 349.4 562 36.8
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 6.7e-94 349.0 559 37.2
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 1.1e-93 348.2 564 37.8
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.5e-93 347.8 567 38.1
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 1.5e-93 347.8 560 35.7
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 2.0e-93 347.4 560 36.6
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 5.7e-93 345.9 482 39.6
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 7.4e-93 345.5 567 36.0
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 3.7e-92 343.2 561 36.5
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 6.3e-92 342.4 560 35.7
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 1.1e-91 341.7 558 36.4
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.8e-91 340.9 555 37.3
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 2.4e-91 340.5 565 36.5
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 3.1e-91 340.1 570 35.6
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 9.1e-91 338.6 560 36.8
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 1.2e-90 338.2 560 36.4
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.5e-90 337.8 567 35.6
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 4.5e-90 336.3 566 35.2
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 5.9e-90 335.9 492 38.0
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 5.9e-90 335.9 563 35.2
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 1.0e-89 335.1 559 35.2
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.3e-89 334.7 560 36.2
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.2e-89 334.0 564 34.9
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 2.2e-89 334.0 565 34.0
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 2.9e-89 333.6 562 35.1
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 5.0e-89 332.8 537 36.3
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 6.5e-89 332.4 562 36.3
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 1.1e-88 331.6 566 34.8
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 1.9e-88 330.9 560 35.5
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 2.5e-88 330.5 533 36.4
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.2e-88 329.7 562 35.9
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 5.5e-88 329.3 564 34.2
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 5.5e-88 329.3 561 35.3
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 7.2e-88 328.9 562 35.8
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 7.2e-88 328.9 538 36.6
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 9.4e-88 328.6 561 34.4
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 9.4e-88 328.6 562 34.5
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 1.2e-87 328.2 560 35.7
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 1.6e-87 327.8 562 35.8
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 2.1e-87 327.4 569 35.9
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 7.9e-87 325.5 562 36.7
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 7.9e-87 325.5 559 34.3
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 7.9e-87 325.5 558 34.6
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 7.9e-87 325.5 564 34.6
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 1.0e-86 325.1 559 35.4
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.0e-86 325.1 560 35.5
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 1.4e-86 324.7 572 34.4
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 1.4e-86 324.7 572 35.7
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 1.4e-86 324.7 561 37.6
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 1.4e-86 324.7 538 36.2
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 1.8e-86 324.3 562 34.7
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 2.3e-86 323.9 585 34.2
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 5.2e-86 322.8 566 34.6
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 2.0e-85 320.9 572 35.0
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.6e-85 320.5 565 33.5
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 5.7e-85 319.3 569 33.4
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 5.7e-85 319.3 556 35.3
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 1.3e-84 318.2 562 36.7
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 2.8e-84 317.0 562 33.6
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 3.7e-84 316.6 557 33.8
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 6.3e-84 315.8 586 35.7
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 8.2e-84 315.5 557 34.6
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 8.2e-84 315.5 571 35.4
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 1.1e-83 315.1 567 37.2
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.1e-83 315.1 567 33.9
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.8e-83 314.3 560 34.3
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 1.8e-83 314.3 567 33.9
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 1.8e-83 314.3 564 33.3
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 1.6e-82 311.2 483 39.5
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 4.5e-82 309.7 560 34.5
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 4.5e-82 309.7 501 35.9
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 4.5e-82 309.7 575 35.3
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 1.0e-81 308.5 563 33.2
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 2.2e-81 307.4 564 35.8
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 8.5e-81 305.4 561 32.6
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 8.5e-81 305.4 599 34.1
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 8.5e-81 305.4 562 33.3
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 1.1e-80 305.1 561 34.4
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.5e-80 304.7 563 33.0
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 1.5e-80 304.7 561 34.6
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 1.9e-80 304.3 560 32.7
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 2.5e-80 303.9 567 33.7
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 5.5e-80 302.8 494 35.0
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 4.7e-79 299.7 580 33.4
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 4.7e-79 299.7 473 35.1
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 4.7e-79 299.7 561 34.2
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 8.8e-78 295.4 607 33.1
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 5.7e-77 292.7 564 33.9
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 5.7e-77 292.7 354 42.7
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 9.7e-77 292.0 443 37.7
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 2.0e-74 284.3 561 31.6
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 3.8e-73 280.0 327 42.5
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 5.0e-73 279.6 275 51.3
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 6.5e-73 279.3 491 32.8
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 1.1e-67 261.9 567 31.9
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 3.1e-59 233.8 485 29.7
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 4.0e-54 216.9 469 31.3
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 3.9e-49 200.3 224 46.9
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 3.0e-41 174.1 412 29.6
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 7.5e-37 159.5 223 38.6
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 4.9e-28 130.2 107 54.2
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.6e-18 98.6 76 57.9
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 1.6e-18 98.6 198 30.8
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 2.1e-07 61.6 49 57.1


User provided reference genes

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