Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 0.0e+00 1199.5 612 100.0
Pp3c27_2440 Physcomitrium patens HOM05D004267 ORTHO05D026610 7.8e-83 312.4 342 51.5
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 5.1e-66 256.5 167 68.9
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 1.2e-59 235.3 167 67.7
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 1.1e-52 212.2 168 60.1
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 4.6e-51 206.8 167 59.3
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 1.0e-50 205.7 168 58.9
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 8.7e-50 202.6 167 58.1
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 2.8e-48 197.6 167 55.7
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 2.8e-48 197.6 167 59.3
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 4.0e-47 193.7 167 55.7
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 1.5e-46 191.8 128 66.4
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 1.5e-46 191.8 167 56.9
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 2.0e-46 191.4 167 55.7
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 3.4e-46 190.7 167 56.3
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 4.5e-46 190.3 167 56.3
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 7.6e-46 189.5 166 56.0
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 7.6e-46 189.5 167 53.3
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 9.9e-46 189.1 167 53.9
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 1.3e-45 188.7 167 56.3
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 2.2e-45 188.0 191 52.4
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 2.2e-45 188.0 191 52.4
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 3.8e-45 187.2 167 53.3
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 4.9e-45 186.8 167 52.7
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 6.4e-45 186.4 167 53.3
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 6.4e-45 186.4 167 53.3
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 1.1e-44 185.7 167 55.7
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 1.1e-44 185.7 167 54.5
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 1.1e-44 185.7 167 55.7
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 1.4e-44 185.3 168 53.6
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 1.4e-44 185.3 167 53.3
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 1.9e-44 184.9 167 52.7
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 1.9e-44 184.9 167 54.5
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 2.4e-44 184.5 171 52.6
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 2.4e-44 184.5 168 53.0
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 2.4e-44 184.5 167 52.7
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 3.2e-44 184.1 164 54.3
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 4.2e-44 183.7 168 53.0
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 4.2e-44 183.7 164 54.9
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 4.2e-44 183.7 167 52.1
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 7.1e-44 183.0 167 52.7
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 7.1e-44 183.0 167 52.7
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 9.3e-44 182.6 168 52.4
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 9.3e-44 182.6 168 52.4
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 9.3e-44 182.6 167 50.9
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 9.3e-44 182.6 167 54.5
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 1.2e-43 182.2 168 51.8
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 1.2e-43 182.2 168 52.4
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 1.2e-43 182.2 168 52.4
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 1.2e-43 182.2 168 52.4
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 1.6e-43 181.8 168 52.4
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 2.1e-43 181.4 168 51.8
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 2.1e-43 181.4 166 51.8
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 2.7e-43 181.0 164 53.0
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 2.7e-43 181.0 168 52.4
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 2.7e-43 181.0 167 53.3
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 2.7e-43 181.0 167 53.3
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 2.7e-43 181.0 167 52.1
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 2.7e-43 181.0 167 52.7
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 4.6e-43 180.3 167 52.1
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 6.0e-43 179.9 166 51.2
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 7.9e-43 179.5 166 51.2
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 7.9e-43 179.5 167 52.1
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 7.9e-43 179.5 167 52.1
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 7.9e-43 179.5 167 52.1
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 1.0e-42 179.1 167 50.9
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 2.3e-42 177.9 166 50.6
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.0e-42 177.6 166 51.2
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 5.1e-42 176.8 168 53.0
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 6.7e-42 176.4 164 52.4
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 8.7e-42 176.0 166 51.2
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 1.5e-41 175.3 167 50.3
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 1.9e-41 174.9 167 50.3
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 1.9e-41 174.9 167 50.9
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 2.5e-41 174.5 178 49.4
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 2.5e-41 174.5 167 47.9
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 3.3e-41 174.1 167 49.7
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 4.3e-41 173.7 167 47.3
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 4.3e-41 173.7 167 51.5
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 4.3e-41 173.7 167 49.7
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 2.1e-40 171.4 145 53.8
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 2.1e-40 171.4 167 49.1
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 4.8e-40 170.2 167 53.9
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 4.8e-40 170.2 167 49.1
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 6.2e-40 169.9 167 50.3
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 6.2e-40 169.9 167 50.3
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 8.2e-40 169.5 167 49.1
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 1.4e-39 168.7 167 47.9
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.4e-39 168.7 179 46.9
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 1.8e-39 168.3 189 46.6
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 2.4e-39 167.9 167 47.3
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 2.4e-39 167.9 167 51.5
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 2.4e-39 167.9 187 48.7
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 3.1e-39 167.5 167 49.1
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 4.0e-39 167.2 168 48.8
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 4.0e-39 167.2 164 48.2
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 5.3e-39 166.8 167 49.1
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 5.3e-39 166.8 167 47.9
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 1.2e-38 165.6 165 49.1
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 1.2e-38 165.6 167 49.1
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 5.8e-38 163.3 182 46.7
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 7.6e-38 162.9 166 49.4
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 1.0e-37 162.5 189 44.4
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 1.7e-37 161.8 203 42.4
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 2.9e-37 161.0 164 46.3
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 6.5e-37 159.8 166 47.6
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 1.9e-36 158.3 189 42.9
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 7.1e-36 156.4 167 48.5
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 9.3e-36 156.0 164 49.4
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 7.9e-35 152.9 125 53.6
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 1.8e-34 151.8 137 54.7
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 6.7e-34 149.8 134 52.2
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 2.5e-33 147.9 127 52.0
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 4.3e-33 147.1 166 41.6
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 9.7e-33 146.0 219 37.0
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 3.7e-32 144.1 178 41.0
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 6.3e-32 143.3 131 47.3
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 8.2e-32 142.9 175 42.3
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.4e-31 142.1 134 50.0
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.8e-31 141.7 133 50.4
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 4.1e-31 140.6 164 47.0
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 6.9e-31 139.8 122 50.8
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 1.2e-30 139.0 119 52.1
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.0e-29 136.0 130 50.0
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 5.5e-28 130.2 164 41.5
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 2.1e-27 128.3 165 41.2
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 2.3e-26 124.8 163 41.1
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.3e-25 120.9 145 41.4
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 1.3e-24 119.0 107 49.5
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.3e-24 119.0 167 37.7
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 9.1e-23 112.8 147 41.5
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 7.7e-22 109.8 167 38.9
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 2.9e-21 107.8 124 46.8
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 1.4e-20 105.5 97 50.5
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 1.4e-20 105.5 97 50.5
Cre09.g395800 Chlamydomonas reinhardtii HOM05D004267 ORTHO05D005267 9.4e-20 102.8 170 38.2
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 3.0e-18 97.8 98 50.0
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.7e-16 92.0 165 34.5
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 1.7e-16 92.0 97 49.5
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 4.8e-16 90.5 165 33.3
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 1.2e-14 85.9 101 39.6
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 6.5e-13 80.1 91 42.9
Aqoxy7G03867 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 8.5e-13 79.7 127 35.4
MCO11G136 Micromonas commoda HOM05D004267 ORTHO05D005267 8.5e-13 79.7 172 31.4
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 8.5e-13 79.7 78 44.9
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 3.2e-12 77.8 78 44.9
Oeu057699.1 Olea europaea HOM05D004267 ORTHO05D005267 9.4e-12 76.3 112 37.5
AUR62002213 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.5e-09 68.9 50 58.0
AUR62010512 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.5e-09 68.9 50 58.0
AUR62018016 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.5e-09 68.9 50 58.0
BcaC07g42315 Brassica carinata HOM05D004267 ORTHO05D005267 2.6e-09 68.2 183 30.1
Mapoly0014s0132 Marchantia polymorpha HOM05D037527 ORTHO05D026610 2.6e-09 68.2 336 24.1
AUR62022800 Chenopodium quinoa HOM05D004267 ORTHO05D005267 4.4e-09 67.4 51 56.9
Nitab4.5_0001927g0060 Nicotiana tabacum HOM05D004267 ORTHO05D005267 4.4e-09 67.4 114 31.6
AUR62007889 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.8e-08 64.7 50 56.0
Nitab4.5_0001927g0070 Nicotiana tabacum HOM05D004267 ORTHO05D005267 6.3e-08 63.5 53 47.2
AUR62044607 Chenopodium quinoa HOM05D004267 ORTHO05D005267 8.2e-08 63.2 50 56.0
AUR62034857 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.8e-07 62.0 50 54.0


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