Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.2e-276 953.7 479 100.0
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.7e-174 614.8 469 68.0
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.3e-146 523.9 455 61.3
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.2e-144 517.3 455 60.2
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.8e-142 508.4 465 58.7
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.6e-142 508.1 457 59.5
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 9.3e-140 501.1 459 59.5
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 2.1e-136 490.0 441 58.7
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 4.8e-120 435.6 436 52.8
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 7.6e-118 428.3 366 59.6
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 8.5e-85 318.5 319 49.5
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 8.5e-85 318.5 309 49.5
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 3.2e-84 316.6 327 47.7
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 4.2e-84 316.2 319 48.3
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 7.2e-84 315.5 319 49.5
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 7.2e-84 315.5 308 50.0
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 1.4e-82 311.2 308 48.7
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 2.3e-82 310.5 319 48.3
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 6.7e-82 308.9 310 48.1
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 6.7e-82 308.9 306 49.0
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 1.1e-81 308.1 308 48.4
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-81 308.1 308 48.4
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 1.1e-81 308.1 308 48.7
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 2.0e-81 307.4 308 48.7
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.3e-80 304.7 324 46.0
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 2.8e-80 303.5 333 45.6
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.7e-80 303.1 324 47.5
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 3.7e-80 303.1 305 48.9
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 4.8e-80 302.8 308 46.1
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 4.8e-80 302.8 322 47.5
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 6.3e-80 302.4 339 46.0
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 6.3e-80 302.4 308 48.1
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 1.1e-79 301.6 305 48.5
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.4e-79 301.2 213 70.9
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 7.0e-79 298.9 318 46.9
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.6e-78 297.7 324 44.8
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.6e-78 297.7 329 45.9
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.6e-78 297.7 308 47.7
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 2.7e-78 297.0 338 46.2
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 4.5e-78 296.2 305 47.9
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 4.5e-78 296.2 310 46.8
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 7.7e-78 295.4 317 45.7
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 2.9e-77 293.5 308 47.7
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 3.8e-77 293.1 306 45.8
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 5.0e-77 292.7 308 46.4
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 5.0e-77 292.7 310 48.1
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 6.5e-77 292.4 309 46.6
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 6.5e-77 292.4 308 47.4
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 8.5e-77 292.0 326 45.4
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.1e-76 291.6 324 45.1
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.9e-76 290.8 308 46.1
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 2.5e-76 290.4 308 47.1
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 4.2e-76 289.7 309 46.9
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 4.2e-76 289.7 309 46.9
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.2e-76 289.7 308 47.1
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 4.2e-76 289.7 318 45.9
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 5.5e-76 289.3 308 46.1
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 5.5e-76 289.3 309 46.9
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 7.2e-76 288.9 308 46.1
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 7.2e-76 288.9 308 46.8
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 7.2e-76 288.9 312 47.4
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 7.2e-76 288.9 324 44.8
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 9.4e-76 288.5 324 44.8
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 9.4e-76 288.5 330 45.5
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.2e-75 288.1 317 43.8
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.2e-75 288.1 308 46.4
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.6e-75 287.7 308 46.8
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 1.6e-75 287.7 305 46.2
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.6e-75 287.7 308 46.1
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 1.0e-74 285.0 320 43.4
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 1.4e-74 284.6 311 46.0
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.8e-74 284.3 317 45.4
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 4.0e-74 283.1 323 45.5
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.2e-73 281.6 287 46.3
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 1.2e-73 281.6 317 45.1
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 1.2e-73 281.6 323 45.5
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 2.6e-73 280.4 323 45.5
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 4.4e-73 279.6 312 45.2
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 7.5e-73 278.9 308 43.2
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.3e-72 278.1 305 45.2
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.3e-72 278.1 310 45.8
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 1.7e-72 277.7 288 47.9
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 3.7e-72 276.6 341 41.9
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 4.8e-72 276.2 307 45.0
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 8.3e-72 275.4 273 50.2
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 2.4e-71 273.9 284 47.2
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 3.1e-71 273.5 323 44.3
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 5.4e-71 272.7 323 44.0
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 9.1e-71 271.9 306 43.8
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 2.0e-70 270.8 317 44.2
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.9e-68 264.2 277 47.3
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 4.2e-68 263.1 269 48.3
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 2.7e-67 260.4 302 45.0
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 3.6e-67 260.0 310 41.9
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.4e-66 258.1 306 44.1
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 3.0e-66 256.9 334 40.7
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 4.4e-65 253.1 258 48.1
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 1.8e-63 247.7 311 42.8
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 9.5e-60 235.3 234 50.4
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 3.0e-58 230.3 254 46.1
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 1.2e-57 228.4 320 38.4
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 4.1e-55 219.9 305 40.7
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.7e-54 217.2 240 46.7
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 8.3e-48 195.7 310 34.2
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 4.1e-47 193.4 223 44.8
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 2.3e-45 187.6 312 35.3
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 1.6e-38 164.9 364 30.5
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 4.9e-32 143.3 311 29.9
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 2.3e-21 107.8 103 47.6
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 1.3e-16 92.0 134 38.8
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-10 72.4 113 34.5


User provided reference genes

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