Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.3e-179 632.1 315 100.0
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 6.7e-131 471.1 319 74.0
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 1.9e-77 293.5 196 67.9
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 9.0e-75 284.6 252 57.9
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 2.4e-59 233.4 186 56.5
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 6.4e-57 225.3 188 57.4
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 8.4e-57 224.9 186 58.1
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 1.9e-56 223.8 190 56.8
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 3.2e-56 223.0 182 59.3
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 5.5e-56 222.2 188 55.3
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 5.5e-56 222.2 184 57.6
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 1.6e-55 220.7 190 55.3
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 1.6e-55 220.7 195 54.4
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 2.1e-55 220.3 188 55.3
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 2.7e-55 219.9 182 56.6
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 2.7e-55 219.9 190 54.7
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 2.7e-55 219.9 215 52.1
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 2.7e-55 219.9 190 56.8
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 2.7e-55 219.9 184 56.5
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 2.7e-55 219.9 188 56.4
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 3.5e-55 219.5 190 54.2
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 4.6e-55 219.2 190 54.2
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 4.6e-55 219.2 190 54.2
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 6.0e-55 218.8 215 51.6
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 1.3e-54 217.6 192 55.2
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 1.8e-54 217.2 196 53.6
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 1.8e-54 217.2 203 52.7
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 1.8e-54 217.2 190 55.3
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 2.3e-54 216.9 198 53.5
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 2.3e-54 216.9 198 53.5
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 2.3e-54 216.9 198 53.5
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 2.3e-54 216.9 198 53.5
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 2.3e-54 216.9 190 54.2
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 5.1e-54 215.7 182 55.5
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 5.1e-54 215.7 194 53.6
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 5.1e-54 215.7 239 49.4
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 6.7e-54 215.3 185 56.8
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 6.7e-54 215.3 192 53.6
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 8.7e-54 214.9 197 53.8
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 8.7e-54 214.9 188 55.3
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 1.1e-53 214.5 196 54.6
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 1.1e-53 214.5 239 46.4
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.1e-53 214.5 188 53.2
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 1.1e-53 214.5 188 55.3
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 1.5e-53 214.2 227 48.9
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 1.5e-53 214.2 191 53.9
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 1.5e-53 214.2 190 53.7
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 2.5e-53 213.4 188 55.3
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 4.3e-53 212.6 182 57.7
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 4.3e-53 212.6 194 54.1
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 5.6e-53 212.2 213 51.6
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 5.6e-53 212.2 211 50.2
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 7.4e-53 211.8 192 55.2
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 7.4e-53 211.8 236 48.7
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 7.4e-53 211.8 191 54.5
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 1.3e-52 211.1 185 54.1
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 1.3e-52 211.1 185 54.1
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 1.3e-52 211.1 191 53.4
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 1.6e-52 210.7 191 55.0
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 1.6e-52 210.7 209 49.3
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 2.1e-52 210.3 206 51.0
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 2.8e-52 209.9 204 50.5
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 3.7e-52 209.5 188 54.3
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 4.8e-52 209.1 241 46.1
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 8.2e-52 208.4 189 53.4
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 1.1e-51 208.0 180 54.4
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 1.1e-51 208.0 211 50.7
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 1.1e-51 208.0 180 55.6
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 1.4e-51 207.6 183 56.3
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.8e-51 207.2 194 51.0
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.8e-51 207.2 188 54.3
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 5.3e-51 205.7 182 55.5
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 5.3e-51 205.7 182 54.4
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 9.0e-51 204.9 180 55.0
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 2.0e-50 203.8 209 49.3
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 4.5e-50 202.6 208 50.5
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.9e-49 199.9 198 51.0
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 4.9e-49 199.1 189 51.9
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 4.9e-49 199.1 202 50.5
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 1.1e-48 198.0 220 48.2
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 1.3e-46 191.0 168 53.6
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 3.9e-46 189.5 166 53.6
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 8.7e-46 188.3 289 40.8
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.1e-45 188.0 283 41.3
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.5e-45 187.6 182 52.7
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 9.7e-45 184.9 189 50.3
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 1.6e-44 184.1 223 43.9
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 3.7e-44 183.0 203 47.3
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.2e-41 173.7 194 46.4
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 5.0e-41 172.6 161 52.2
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 8.5e-41 171.8 220 47.3
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 7.2e-40 168.7 151 53.0
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.6e-39 166.0 261 39.5
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 1.0e-38 164.9 149 53.7
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 3.0e-38 163.3 149 54.4
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 3.3e-37 159.8 174 48.3
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 1.7e-36 157.5 129 55.8
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 2.2e-36 157.1 151 55.0
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 6.9e-35 152.1 129 58.9
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.3e-33 147.9 199 42.7
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 1.3e-33 147.9 224 37.9
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 3.9e-30 136.3 157 44.6
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 1.1e-29 134.8 129 54.3
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 7.4e-29 132.1 188 40.4
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 8.2e-28 128.6 176 42.0
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 8.0e-23 112.1 176 36.9
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 3.3e-21 106.7 245 31.0
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.7e-20 104.4 93 51.6
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 1.7e-20 104.4 189 34.9
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 6.3e-20 102.4 93 51.6
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.8e-19 100.9 88 51.1
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 1.6e-18 97.8 93 49.5
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 6.5e-17 92.4 85 54.1


User provided reference genes

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