Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c4_3150 Physcomitrium patens HOM05D003361 ORTHO05D003760 3.1e-145 519.6 583 100.0
Pp3c8_1510 Physcomitrium patens HOM05D003361 ORTHO05D003760 3.8e-71 273.5 247 73.7
Mapoly0032s0095 Marchantia polymorpha HOM05D003361 ORTHO05D003760 9.2e-49 199.1 303 46.2
SEGI_28212 Sequoiadendron giganteum HOM05D003361 ORTHO05D003760 1.6e-45 188.3 247 57.9
AagrBONN_evm.TU.Sc2ySwM_362.1382 Anthoceros agrestis HOM05D003361 ORTHO05D003760 2.8e-45 187.6 305 56.1
MELO3C023445.2 Cucumis melo HOM05D003361 ORTHO05D003760 3.4e-43 180.6 243 40.3
Actinidia15974 Actinidia chinensis HOM05D003361 ORTHO05D003760 2.2e-42 177.9 241 59.3
Rhsim12G0189300 Rhododendron simsii HOM05D003361 ORTHO05D003760 2.9e-42 177.6 243 58.8
Haze_16605 Corylus avellana HOM05D003361 ORTHO05D003760 1.4e-41 175.3 249 41.4
Nitab4.5_0002322g0060 Nicotiana tabacum HOM05D003361 ORTHO05D003760 2.4e-41 174.5 258 39.5
Hund21595 Selenicereus undatus HOM05D003361 ORTHO05D003760 2.4e-41 174.5 230 58.7
Hund00496 Selenicereus undatus HOM05D003361 ORTHO05D003760 9.2e-41 172.6 230 58.7
AUR62020008 Chenopodium quinoa HOM05D003361 ORTHO05D003760 2.7e-40 171.0 229 55.5
vmacro16874 Vaccinium macrocarpon HOM05D003361 ORTHO05D003760 2.7e-40 171.0 244 58.6
RcHm_v2.0_Chr2g0134401 Rosa chinensis HOM05D003361 ORTHO05D003760 3.5e-40 170.6 248 55.2
MD02G1018400 Malus domestica HOM05D003361 ORTHO05D003760 7.8e-40 169.5 232 58.2
arahy.Tifrunner.gnm1.ann1.MWAB5B Arachis hypogaea HOM05D003361 ORTHO05D003760 1.3e-39 168.7 244 57.4
Cpa.g.sc46.67 Carica papaya HOM05D003361 ORTHO05D003760 1.7e-39 168.3 225 62.2
FAN28G0525 Fragaria x ananassa HOM05D003361 ORTHO05D003760 1.7e-39 168.3 228 59.6
Lj4g0018391 Lotus japonicus HOM05D003361 ORTHO05D003760 1.7e-39 168.3 230 58.7
Sopen03g036300 Solanum pennellii HOM05D003361 ORTHO05D003760 1.7e-39 168.3 228 57.9
FvH4_1g02020 Fragaria vesca HOM05D003361 ORTHO05D003760 2.3e-39 167.9 229 60.3
AUR62011226 Chenopodium quinoa HOM05D003361 ORTHO05D003760 3.0e-39 167.5 229 55.0
Solyc03g117420.4 Solanum lycopersicum HOM05D003361 ORTHO05D003760 3.9e-39 167.2 228 58.3
ATR0767G175 Amborella trichopoda HOM05D003361 ORTHO05D003760 6.6e-39 166.4 225 61.8
Peaxi162Scf00332g00127 Petunia axillaris HOM05D003361 ORTHO05D003760 6.6e-39 166.4 228 58.3
COL.COLO4_33367 Corchorus olitorius HOM05D003361 ORTHO05D003760 8.6e-39 166.0 227 59.0
Manes.04G108700 Manihot esculenta HOM05D003361 ORTHO05D003760 1.1e-38 165.6 228 59.6
Oeu029903.1 Olea europaea HOM05D003361 ORTHO05D003760 1.1e-38 165.6 229 59.0
SMO200G0229 Selaginella moellendorffii HOM05D003361 ORTHO05D003760 1.9e-38 164.9 227 39.6
CiPaw.01G250600 Carya illinoinensis HOM05D003361 ORTHO05D003760 2.5e-38 164.5 226 61.1
Atru.chr7.2012 Acer truncatum HOM05D003361 ORTHO05D003760 3.3e-38 164.1 230 58.7
Gohir.D10G079000 Gossypium hirsutum HOM05D003361 ORTHO05D003760 3.3e-38 164.1 230 59.6
Gorai.011G085800 Gossypium raimondii HOM05D003361 ORTHO05D003760 3.3e-38 164.1 230 59.6
CAN.G407.25 Capsicum annuum HOM05D003361 ORTHO05D003760 4.3e-38 163.7 228 58.3
Prupe.3G092900 Prunus persica HOM05D003361 ORTHO05D003760 5.6e-38 163.3 225 58.2
Sabra06G0044400 Salix brachista HOM05D003361 ORTHO05D003760 5.6e-38 163.3 231 56.3
TWI32G1011 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 5.6e-38 163.3 226 57.5
RcHm_v2.0_Chr2g0087081 Rosa chinensis HOM05D003361 ORTHO05D003760 7.3e-38 162.9 230 58.3
Atru.chr1.2849 Acer truncatum HOM05D003361 ORTHO05D003760 1.2e-37 162.2 237 56.5
Lalb_Chr12g0198401 Lupinus albus HOM05D003361 ORTHO05D003760 1.2e-37 162.2 227 50.7
Manes.11G061100 Manihot esculenta HOM05D003361 ORTHO05D003760 1.2e-37 162.2 230 59.6
Nitab4.5_0001017g0020 Nicotiana tabacum HOM05D003361 ORTHO05D003760 1.2e-37 162.2 230 57.8
Hma1.2p1_0461F.1_g157700 Hydrangea macrophylla HOM05D003361 ORTHO05D003760 2.1e-37 161.4 177 49.2
TWI75G0489 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 2.1e-37 161.4 229 57.6
COL.COLO4_11855 Corchorus olitorius HOM05D003361 ORTHO05D003760 2.8e-37 161.0 225 58.7
Dinv41445 Davidia involucrata HOM05D003361 ORTHO05D003760 2.8e-37 161.0 231 57.1
SalBow7G0810 Salvia bowleyana HOM05D003361 ORTHO05D003760 2.8e-37 161.0 226 58.0
SalBow7G3482 Salvia bowleyana HOM05D003361 ORTHO05D003760 2.8e-37 161.0 226 58.0
CSS0014218 Camellia sinensis var. sinensis HOM05D003361 ORTHO05D003760 3.6e-37 160.6 230 58.3
CiPaw.02G158600 Carya illinoinensis HOM05D003361 ORTHO05D003760 3.6e-37 160.6 234 57.7
Gohir.A10G072100 Gossypium hirsutum HOM05D003361 ORTHO05D003760 3.6e-37 160.6 230 59.1
TAR383G0111 Trochodendron aralioides HOM05D003361 ORTHO05D003760 3.6e-37 160.6 231 58.0
MSTRG.22764 Avicennia marina HOM05D003361 ORTHO05D003760 4.7e-37 160.2 228 57.5
CsaV3_7G032160 Cucumis sativus L. HOM05D003361 ORTHO05D003760 4.7e-37 160.2 225 40.0
DCAR_025527 Daucus carota HOM05D003361 ORTHO05D003760 4.7e-37 160.2 235 40.0
Glyma.17G107400 Glycine max HOM05D003361 ORTHO05D003760 6.2e-37 159.8 228 57.0
Thecc.09G137400 Theobroma cacao HOM05D003361 ORTHO05D003760 6.2e-37 159.8 227 56.4
CARHR016230 Cardamine hirsuta HOM05D003361 ORTHO05D003760 1.0e-36 159.1 226 56.2
Carub.0001s1551 Capsella rubella HOM05D003361 ORTHO05D003760 1.4e-36 158.7 226 56.6
Duzib160G0541 Durio zibethinus HOM05D003361 ORTHO05D003760 1.4e-36 158.7 232 58.2
MD15G1162400 Malus domestica HOM05D003361 ORTHO05D003760 1.4e-36 158.7 173 47.4
Sc08g0006030 Simmondsia chinensis HOM05D003361 ORTHO05D003760 1.4e-36 158.7 227 57.7
GSVIVG01017472001 Vitis vinifera HOM05D003361 ORTHO05D003760 1.4e-36 158.7 228 59.6
BcaC05g25516 Brassica carinata HOM05D003361 ORTHO05D003760 1.8e-36 158.3 226 56.2
Thecc.06G033100 Theobroma cacao HOM05D003361 ORTHO05D003760 2.3e-36 157.9 230 59.1
Gohir.A08G090300 Gossypium hirsutum HOM05D003361 ORTHO05D003760 3.1e-36 157.5 227 56.8
Manes.14G119228 Manihot esculenta HOM05D003361 ORTHO05D003760 3.1e-36 157.5 172 44.8
Duzib235G0043 Durio zibethinus HOM05D003361 ORTHO05D003760 4.0e-36 157.1 230 58.3
Prupe.7G252400 Prunus persica HOM05D003361 ORTHO05D003760 4.0e-36 157.1 227 56.8
GSVIVG01012857001 Vitis vinifera HOM05D003361 ORTHO05D003760 4.0e-36 157.1 229 56.8
Eucgr.J03087 Eucalyptus grandis HOM05D003361 ORTHO05D003760 5.2e-36 156.8 225 58.2
Glyma.13G163500 Glycine max HOM05D003361 ORTHO05D003760 5.2e-36 156.8 227 56.8
AL1G27850 Arabidopsis lyrata HOM05D003361 ORTHO05D003760 6.8e-36 156.4 226 55.3
CANSAT56G3261 Cannabis sativa HOM05D003361 ORTHO05D003760 6.8e-36 156.4 231 57.6
Ca_21637_v3 Cicer arietinum L. HOM05D003361 ORTHO05D003760 6.8e-36 156.4 227 57.7
Thhalv10007169m.g Eutrema salsugineum HOM05D003361 ORTHO05D003760 6.8e-36 156.4 225 54.7
Aqoxy7G02456 Aquilegia oxysepala HOM05D003361 ORTHO05D003760 8.9e-36 156.0 176 47.7
FAN19G1251 Fragaria x ananassa HOM05D002026 ORTHO05D002291 8.9e-36 156.0 224 58.5
Gohir.D08G101300 Gossypium hirsutum HOM05D003361 ORTHO05D003760 1.2e-35 155.6 227 55.9
Gorai.004G109300 Gossypium raimondii HOM05D003361 ORTHO05D003760 1.2e-35 155.6 227 55.9
ClCG09G003110 Citrullus lanatus HOM05D003361 ORTHO05D003760 1.5e-35 155.2 225 46.7
Ciclev10025249m.g Citrus clementina HOM05D003361 ORTHO05D003760 1.5e-35 155.2 230 57.4
FAN09G2631 Fragaria x ananassa HOM05D003361 ORTHO05D003760 1.5e-35 155.2 232 55.6
Lj9A497T71 Lonicera japonica HOM05D003361 ORTHO05D003760 1.5e-35 155.2 229 57.6
Sp1g14030 Schrenkiella parvula HOM05D003361 ORTHO05D003760 1.5e-35 155.2 226 55.3
A06p11730 Brassica napus HOM05D003361 ORTHO05D003760 2.0e-35 154.8 226 55.8
BraA06t24343Z Brassica rapa HOM05D003361 ORTHO05D003760 2.0e-35 154.8 226 55.8
PGR031G1162 Punica granatum HOM05D003361 ORTHO05D003760 2.0e-35 154.8 232 57.3
CANSAT11G0288 Cannabis sativa HOM05D003361 ORTHO05D003760 2.6e-35 154.5 233 38.6
QL05p032608 Quercus lobata HOM05D003361 ORTHO05D003760 2.6e-35 154.5 236 55.1
arahy.Tifrunner.gnm1.ann1.H7Z4S8 Arachis hypogaea HOM05D003361 ORTHO05D003760 3.4e-35 154.1 229 56.3
arahy.Tifrunner.gnm1.ann1.T3C7Q8 Arachis hypogaea HOM05D003361 ORTHO05D003760 3.4e-35 154.1 229 48.5
FAN14G3167 Fragaria x ananassa HOM05D003361 ORTHO05D003760 3.4e-35 154.1 230 56.1
Aa31LG7G360 Aethionema arabicum HOM05D003361 ORTHO05D003760 4.4e-35 153.7 227 55.5
AT1G15740 Arabidopsis thaliana HOM05D003361 ORTHO05D003760 4.4e-35 153.7 173 46.2
EL10Ac8g18785 Beta vulgaris HOM05D003361 ORTHO05D003760 4.4e-35 153.7 231 55.4
FvH4_6g29180 Fragaria vesca HOM05D003361 ORTHO05D003760 4.4e-35 153.7 230 56.1
FAN02G1685 Fragaria x ananassa HOM05D003361 ORTHO05D003760 4.4e-35 153.7 248 52.8
HanXRQChr17g0570311 Helianthus annuus HOM05D003361 ORTHO05D003760 4.4e-35 153.7 235 56.6
Potri.006G061700 Populus trichocarpa HOM05D003361 ORTHO05D003760 4.4e-35 153.7 229 58.1
Cc04_g04660 Coffea canephora HOM05D003361 ORTHO05D003760 5.8e-35 153.3 225 58.2
C05p13880 Brassica napus HOM05D003361 ORTHO05D003760 7.5e-35 152.9 226 55.8
BolC5t30122H Brassica oleracea HOM05D003361 ORTHO05D003760 7.5e-35 152.9 226 55.8
FAN05G3872 Fragaria x ananassa HOM05D003361 ORTHO05D003760 7.5e-35 152.9 230 55.7
TPR.G7990 Trifolium pratense HOM05D003361 ORTHO05D003760 7.5e-35 152.9 227 47.6
Ca_12515_v3 Cicer arietinum L. HOM05D003361 ORTHO05D003760 9.8e-35 152.5 233 56.2
Migut.I00738 Erythranthe guttata HOM05D003361 ORTHO05D003760 9.8e-35 152.5 227 54.6
Medtr4g116170 Medicago truncatula HOM05D003361 ORTHO05D003760 9.8e-35 152.5 227 57.7
Solyc12g009870.2 Solanum lycopersicum HOM05D003361 ORTHO05D003760 1.3e-34 152.1 248 50.0
Nn8g39646 Nelumbo nucifera HOM05D003361 ORTHO05D003760 1.7e-34 151.8 174 46.0
THA.LOC104812464 Tarenaya hassleriana HOM05D003361 ORTHO05D003760 1.7e-34 151.8 228 55.7
Psat7g257800 Pisum sativum HOM05D003361 ORTHO05D003760 2.2e-34 151.4 229 56.3
TAR626G1829 Trochodendron aralioides HOM05D003361 ORTHO05D003760 2.2e-34 151.4 172 48.8
Dinv36449 Davidia involucrata HOM05D003361 ORTHO05D003760 2.9e-34 151.0 173 47.4
Psat0s571g0080 Pisum sativum HOM05D003361 ORTHO05D003760 2.9e-34 151.0 227 55.1
TWI12G0888 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 2.9e-34 151.0 228 55.3
ECA246G4877 Erigeron canadensis HOM05D003361 ORTHO05D003760 3.7e-34 150.6 227 55.9
Sed0010441 Sechium edule HOM05D003361 ORTHO05D003760 3.7e-34 150.6 254 57.1
arahy.Tifrunner.gnm1.ann1.NFA80P Arachis hypogaea HOM05D003361 ORTHO05D003760 4.9e-34 150.2 229 58.1
arahy.Tifrunner.gnm1.ann1.JM4LQW Arachis hypogaea HOM05D003361 ORTHO05D003760 8.3e-34 149.4 229 58.1
Glyma.07G028300 Glycine max HOM05D003361 ORTHO05D003760 8.3e-34 149.4 230 56.5
Sed0016861 Sechium edule HOM05D003361 ORTHO05D003760 8.3e-34 149.4 225 51.6
PGSC0003DMG400007912 Solanum tuberosum HOM05D003361 ORTHO05D003760 8.3e-34 149.4 248 50.0
Dinv30637 Davidia involucrata HOM05D003361 ORTHO05D003760 1.4e-33 148.7 227 57.3
Lalb_Chr01g0012261 Lupinus albus HOM05D003361 ORTHO05D003760 1.4e-33 148.7 229 57.2
Ah.09g224100 Amaranthus hybridus HOM05D003361 ORTHO05D003760 1.9e-33 148.3 233 56.7
Lsat_1_v5_gn_5_8861 Lactuca sativa HOM05D003361 ORTHO05D003760 1.9e-33 148.3 172 44.8
Lj3g0011414 Lotus japonicus HOM05D003361 ORTHO05D003760 1.9e-33 148.3 232 56.5
Os02g0613200 Oryza sativa ssp. japonica HOM05D003361 ORTHO05D003760 3.2e-33 147.5 232 54.3
CDE05G0968 Ceratophyllum demersum HOM05D003361 ORTHO05D003760 4.1e-33 147.1 172 45.9
Phvul.010G157600 Phaseolus vulgaris HOM05D003361 ORTHO05D003760 4.1e-33 147.1 230 56.1
Cc06_g07660 Coffea canephora HOM05D003361 ORTHO05D003760 7.0e-33 146.4 244 36.1
SGA_v2.0_scaffold37G14747 Striga asiatica HOM05D003361 ORTHO05D003760 7.0e-33 146.4 230 56.5
Phvul.003G172400 Phaseolus vulgaris HOM05D003361 ORTHO05D003760 9.2e-33 146.0 227 55.9
HPP92_017331 Vanilla planifolia HOM05D003361 ORTHO05D003760 9.2e-33 146.0 172 45.3
MBI14_g24987_MAGBIO Magnolia biondii HOM05D003361 ORTHO05D003760 1.2e-32 145.6 172 47.1
Zm00001eb247040 Zea mays HOM05D003361 ORTHO05D003760 1.2e-32 145.6 246 48.8
MD17G1217000 Malus domestica HOM05D003361 ORTHO05D003760 2.0e-32 144.8 164 67.7
PSO170G6803 Papaver somniferum HOM05D003361 ORTHO05D003760 2.0e-32 144.8 176 44.9
MSTRG.11160 Avicennia marina HOM05D003361 ORTHO05D003760 2.7e-32 144.4 234 53.4
QL02p090717 Quercus lobata HOM05D003361 ORTHO05D003760 2.7e-32 144.4 178 44.4
Nn2g12188 Nelumbo nucifera HOM05D003361 ORTHO05D003760 3.5e-32 144.1 174 46.0
VMungo0331G0010 Vigna mungo HOM05D003361 ORTHO05D003760 3.5e-32 144.1 174 66.7
Glyma.08G214500 Glycine max HOM05D003361 ORTHO05D003760 4.6e-32 143.7 229 55.5
Os04g0503500 Oryza sativa ssp. japonica HOM05D003361 ORTHO05D003760 1.7e-31 141.7 173 45.7
PSO017G3211 Papaver somniferum HOM05D003361 ORTHO05D003760 1.7e-31 141.7 176 44.3
THA.LOC104808198 Tarenaya hassleriana HOM05D003361 ORTHO05D003760 3.0e-31 141.0 225 52.4
TPR.G38632 Trifolium pratense HOM05D003361 ORTHO05D003760 1.1e-30 139.0 173 43.9
Psat1g109200 Pisum sativum HOM05D003361 ORTHO05D003760 1.9e-30 138.3 227 36.6
Glyma.13G367200 Glycine max HOM05D003361 ORTHO05D003760 2.5e-30 137.9 202 58.4
Medtr4g009873 Medicago truncatula HOM05D003361 ORTHO05D003760 3.3e-30 137.5 170 44.1
Peaxi162Scf01694g00019 Petunia axillaris HOM05D003361 ORTHO05D003760 9.5e-30 136.0 173 44.5
Duzib187G1093 Durio zibethinus HOM05D003361 ORTHO05D003760 2.8e-29 134.4 164 62.2
Nitab4.5_0002286g0090 Nicotiana tabacum HOM05D003361 ORTHO05D003760 6.2e-29 133.3 232 49.6
SHI02098 Sapria himalayana HOM05D003361 ORTHO05D003760 6.2e-29 133.3 180 43.9
Lj3g0027196 Lotus japonicus HOM05D003361 ORTHO05D003760 1.2e-27 129.0 171 60.2
Zm00001eb078100 Zea mays HOM05D003361 ORTHO05D003760 2.0e-27 128.3 171 40.4
Solyc07g007420.3 Solanum lycopersicum HOM05D003361 ORTHO05D003760 5.8e-27 126.7 177 42.9
Sopen07g003470 Solanum pennellii HOM05D003361 ORTHO05D003760 5.8e-27 126.7 177 42.9
PGSC0003DMG400030688 Solanum tuberosum HOM05D003361 ORTHO05D003760 7.5e-27 126.3 179 42.5
CAN.G1281.4 Capsicum annuum HOM05D003361 ORTHO05D003760 9.8e-27 125.9 232 47.8
Nitab4.5_0002329g0140 Nicotiana tabacum HOM05D003361 ORTHO05D003760 3.7e-26 124.0 172 40.7
Lsat_1_v5_gn_4_88160 Lactuca sativa HOM05D003361 ORTHO05D003988 4.9e-26 123.6 116 49.1
Peaxi162Scf00088g00618 Petunia axillaris HOM05D003361 ORTHO05D003760 4.1e-25 120.6 235 51.9
Nitab4.5_0009284g0020 Nicotiana tabacum HOM05D003361 ORTHO05D003760 5.4e-25 120.2 175 61.7
Nitab4.5_0008536g0030 Nicotiana tabacum HOM05D003361 ORTHO05D003760 6.6e-23 113.2 173 41.0
Duzib150G0304 Durio zibethinus HOM05D003361 ORTHO05D003760 9.5e-22 109.4 148 59.5
HanXRQChr09g0274781 Helianthus annuus HOM05D003361 ORTHO05D003760 2.1e-21 108.2 121 41.3
arahy.Tifrunner.gnm1.ann1.TB3UR8 Arachis hypogaea HOM05D003361 ORTHO05D003760 1.8e-20 105.1 194 34.5
arahy.Tifrunner.gnm1.ann1.YII6YD Arachis hypogaea HOM05D003361 ORTHO05D003760 1.8e-20 105.1 194 34.5
unitig_699.g19089 Utricularia gibba HOM05D003361 ORTHO05D003760 3.0e-15 87.8 125 44.8
Oeu027837.1 Olea europaea HOM05D003361 ORTHO05D003760 3.3e-14 84.3 117 73.5
Psat0s520g0120 Pisum sativum HOM05D003361 ORTHO05D003760 3.4e-11 74.3 113 46.0
Glyma.15G006200 Glycine max HOM05D003361 ORTHO05D003760 9.3e-09 66.2 95 40.0
MCO10G095 Micromonas commoda HOM05D003361 ORTHO05D003760 1.0e-07 62.8 167 50.3
SGA_v2.0_scaffold11G05885 Striga asiatica HOM05D003361 ORTHO05D003760 1.3e-07 62.4 98 38.8
Actinidia08955 Actinidia chinensis HOM05D003361 ORTHO05D003760 8.7e-07 59.7 99 77.8
CAN.G509.10 Capsicum annuum HOM05D003361 ORTHO05D003760 2.5e-06 58.2 49 55.1
Duzib150G0604 Durio zibethinus HOM05D003361 ORTHO05D003760 2.5e-06 58.2 75 41.3
Haze_16606 Corylus avellana HOM05D003361 ORTHO05D003760 5.6e-06 57.0 73 45.2


User provided reference genes

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